RNA–Protein interactions for RNA: ENST00000538478.5

LRTOMT-215, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 2 BASIC

Gene LRTOMT, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-215ENST00000538478 CABLES1Q8TDN4 633 aa10.29□□□□□ -0.76
LRTOMT-215ENST00000538478 CCDC9Q9Y3X0 531 aaKnown RBP10.29□□□□□ -0.76
LRTOMT-215ENST00000538478 ABCA3Q99758 1704 aa10.28□□□□□ -0.76
LRTOMT-215ENST00000538478 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
LRTOMT-215ENST00000538478 KCNQ2O43526 872 aa10.27□□□□□ -0.77
LRTOMT-215ENST00000538478 SPON1Q9HCB6 807 aa10.27□□□□□ -0.77
LRTOMT-215ENST00000538478 PPP1R1BQ9UD71 204 aaPredicted RBP10.27□□□□□ -0.77
LRTOMT-215ENST00000538478 THSD7AQ9UPZ6 1657 aa10.26□□□□□ -0.77
LRTOMT-215ENST00000538478 A0A0G2JS52 829 aa10.26□□□□□ -0.77
LRTOMT-215ENST00000538478 FAM83GA6ND36 823 aa10.26□□□□□ -0.77
LRTOMT-215ENST00000538478 TRIM37O94972 964 aa10.26□□□□□ -0.77
LRTOMT-215ENST00000538478 MYT1Q01538 1121 aa10.26□□□□□ -0.77
LRTOMT-215ENST00000538478 ANKRD50Q9ULJ7 1429 aa10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 NEXMIFQ5QGS0 1516 aa10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 CDC42BPGQ6DT37 1551 aa10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 NRKQ7Z2Y5 1582 aa10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 FARP1Q9Y4F1 1045 aaPredicted RBP10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 GOLGB1Q14789 3259 aaKnown RBP10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 RGPD8O14715 1765 aaPredicted RBP10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
LRTOMT-215ENST00000538478 MYOM1P52179 1685 aa10.23□□□□□ -0.77
LRTOMT-215ENST00000538478 HAX1O00165 279 aa10.23□□□□□ -0.77
LRTOMT-215ENST00000538478 APBA3O96018 575 aa10.23□□□□□ -0.77
LRTOMT-215ENST00000538478 PDGFDQ9GZP0 370 aaPredicted RBP10.23□□□□□ -0.77
LRTOMT-215ENST00000538478 CASZ1Q86V15 1759 aa10.23□□□□□ -0.77
LRTOMT-215ENST00000538478 ADGRB2O60241 1585 aa10.22□□□□□ -0.77
LRTOMT-215ENST00000538478 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
LRTOMT-215ENST00000538478 ZNF326Q5BKZ1 582 aaKnown RBP10.21□□□□□ -0.77
LRTOMT-215ENST00000538478 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
LRTOMT-215ENST00000538478 LRPPRCP42704 1394 aaKnown RBP10.2□□□□□ -0.78
LRTOMT-215ENST00000538478 SPATA31A5Q5VU36 1347 aa10.2□□□□□ -0.78
LRTOMT-215ENST00000538478 KRT28Q7Z3Y7 464 aa10.2□□□□□ -0.78
LRTOMT-215ENST00000538478 SPATA31A7Q8IWB4 1347 aa10.2□□□□□ -0.78
LRTOMT-215ENST00000538478 ZBTB47Q9UFB7 747 aaPredicted RBP10.2□□□□□ -0.78
LRTOMT-215ENST00000538478 NAIPQ13075 1403 aa10.19□□□□□ -0.78
LRTOMT-215ENST00000538478 TNS3Q68CZ2 1445 aa10.19□□□□□ -0.78
LRTOMT-215ENST00000538478 PTGER2P43116 358 aa10.19□□□□□ -0.78
LRTOMT-215ENST00000538478 BTG4Q9NY30 223 aa10.19□□□□□ -0.78
LRTOMT-215ENST00000538478 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
LRTOMT-215ENST00000538478 NBPF8Q3BBV2 869 aa10.18□□□□□ -0.78
LRTOMT-215ENST00000538478 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
LRTOMT-215ENST00000538478 FAM196AQ6ZSG2 479 aa10.18□□□□□ -0.78
LRTOMT-215ENST00000538478 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
LRTOMT-215ENST00000538478 FMN2Q9NZ56 1722 aa10.18□□□□□ -0.78
LRTOMT-215ENST00000538478 CCDC144AA2RUR9 1427 aa10.17□□□□□ -0.78
LRTOMT-215ENST00000538478 GIGYF1O75420 1035 aaPredicted RBP10.17□□□□□ -0.78
LRTOMT-215ENST00000538478 MNX1P50219 401 aaPredicted RBP10.17□□□□□ -0.78
LRTOMT-215ENST00000538478 KLHL34Q8N239 644 aa10.17□□□□□ -0.78
LRTOMT-215ENST00000538478 SYT17Q9BSW7 474 aa10.17□□□□□ -0.78
LRTOMT-215ENST00000538478 KIF1AQ12756 1690 aa10.17□□□□□ -0.78
LRTOMT-215ENST00000538478 COL14A1Q05707 1796 aaKnown RBP10.16□□□□□ -0.78
LRTOMT-215ENST00000538478 SHANK3Q9BYB0 1731 aa10.16□□□□□ -0.78
LRTOMT-215ENST00000538478 CLTCL1P53675 1640 aa10.16□□□□□ -0.78
LRTOMT-215ENST00000538478 WAPLQ7Z5K2 1190 aa10.16□□□□□ -0.78
LRTOMT-215ENST00000538478 VPS8Q8N3P4 1428 aa10.16□□□□□ -0.78
LRTOMT-215ENST00000538478 ZBTB7AO95365 584 aa10.15□□□□□ -0.78
LRTOMT-215ENST00000538478 FHDC1Q9C0D6 1143 aaPredicted RBP10.15□□□□□ -0.78
LRTOMT-215ENST00000538478 PLEKHH1Q9ULM0 1364 aa10.14□□□□□ -0.79
LRTOMT-215ENST00000538478 KIF1BO60333 1816 aa10.13□□□□□ -0.79
LRTOMT-215ENST00000538478 SBF2Q86WG5 1849 aa10.13□□□□□ -0.79
LRTOMT-215ENST00000538478 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
LRTOMT-215ENST00000538478 CRYBG1Q9Y4K1 1723 aa10.13□□□□□ -0.79
LRTOMT-215ENST00000538478 SBNO1A3KN83 1393 aa10.13□□□□□ -0.79
LRTOMT-215ENST00000538478 SPATA31A1Q5TZJ5 1347 aa10.12□□□□□ -0.79
LRTOMT-215ENST00000538478 IFNLR1Q8IU57 520 aaPredicted RBP10.12□□□□□ -0.79
LRTOMT-215ENST00000538478 SGIP1Q9BQI5 828 aa10.12□□□□□ -0.79
LRTOMT-215ENST00000538478 TRPM3Q9HCF6 1732 aaPredicted RBP10.12□□□□□ -0.79
LRTOMT-215ENST00000538478 NUP155O75694 1391 aa10.12□□□□□ -0.79
LRTOMT-215ENST00000538478 RRBP1Q9P2E9 1410 aaKnown RBP10.11□□□□□ -0.79
LRTOMT-215ENST00000538478 PHF8Q9UPP1 1060 aa10.11□□□□□ -0.79
LRTOMT-215ENST00000538478 ALS2Q96Q42 1657 aa10.11□□□□□ -0.79
LRTOMT-215ENST00000538478 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
LRTOMT-215ENST00000538478 CD44P16070 742 aaKnown RBP10.1□□□□□ -0.79
LRTOMT-215ENST00000538478 PTF1AQ7RTS3 328 aa10.1□□□□□ -0.79
LRTOMT-215ENST00000538478 RGPD3A6NKT7 1758 aaPredicted RBP10.1□□□□□ -0.79
LRTOMT-215ENST00000538478 RGPD4Q7Z3J3 1758 aa10.1□□□□□ -0.79
LRTOMT-215ENST00000538478 ARHGEF10O15013 1369 aa10.1□□□□□ -0.79
LRTOMT-215ENST00000538478 NRXN1Q9ULB1 1477 aa10.1□□□□□ -0.79
LRTOMT-215ENST00000538478 TECPR2O15040 1411 aa10.09□□□□□ -0.79
LRTOMT-215ENST00000538478 PPLO60437 1756 aa10.09□□□□□ -0.79
LRTOMT-215ENST00000538478 DLC1Q96QB1 1528 aa10.09□□□□□ -0.79
LRTOMT-215ENST00000538478 PSME1Q06323 249 aa10.09□□□□□ -0.79
LRTOMT-215ENST00000538478 STK26Q9P289 416 aa10.08□□□□□ -0.8
LRTOMT-215ENST00000538478 PEAK1Q9H792 1746 aa10.07□□□□□ -0.8
LRTOMT-215ENST00000538478 C19orf67A6NJJ6 358 aa10.07□□□□□ -0.8
LRTOMT-215ENST00000538478 VGFO15240 615 aaPredicted RBP10.07□□□□□ -0.8
LRTOMT-215ENST00000538478 PAK3O75914 559 aaPredicted RBP10.07□□□□□ -0.8
LRTOMT-215ENST00000538478 HSPA6P17066 643 aa10.07□□□□□ -0.8
LRTOMT-215ENST00000538478 PDE3BQ13370 1112 aa10.06□□□□□ -0.8
LRTOMT-215ENST00000538478 CHRNA2Q15822 529 aa10.06□□□□□ -0.8
LRTOMT-215ENST00000538478 KNDC1Q76NI1 1749 aa10.06□□□□□ -0.8
LRTOMT-215ENST00000538478 PCNTO95613 3336 aa10.06□□□□□ -0.8
LRTOMT-215ENST00000538478 PLSCR1O15162 318 aa10.05□□□□□ -0.8
LRTOMT-215ENST00000538478 FAM50AQ14320 339 aaKnown RBP10.05□□□□□ -0.8
LRTOMT-215ENST00000538478 PMFBP1Q8TBY8 1022 aa10.05□□□□□ -0.8
LRTOMT-215ENST00000538478 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
LRTOMT-215ENST00000538478 STRN4Q9NRL3 753 aa10.05□□□□□ -0.8
LRTOMT-215ENST00000538478 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
LRTOMT-215ENST00000538478 MAP3K5Q99683 1374 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms