RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 NRKQ7Z2Y5 1582 aa12.54□□□□□ -0.4
DDB1-212ENST00000538470 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
DDB1-212ENST00000538470 THSD7AQ9UPZ6 1657 aa12.53□□□□□ -0.4
DDB1-212ENST00000538470 NUDT16Q96DE0 195 aaKnown RBP12.52□□□□□ -0.41
DDB1-212ENST00000538470 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
DDB1-212ENST00000538470 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
DDB1-212ENST00000538470 FAM83GA6ND36 823 aa12.5□□□□□ -0.41
DDB1-212ENST00000538470 SEPT12Q8IYM1 358 aa12.5□□□□□ -0.41
DDB1-212ENST00000538470 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
DDB1-212ENST00000538470 CCDC9Q9Y3X0 531 aaKnown RBP12.5□□□□□ -0.41
DDB1-212ENST00000538470 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
DDB1-212ENST00000538470 CENPJQ9HC77 1338 aaPredicted RBP12.5□□□□□ -0.41
DDB1-212ENST00000538470 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
DDB1-212ENST00000538470 LMO7Q8WWI1 1683 aa12.49□□□□□ -0.41
DDB1-212ENST00000538470 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
DDB1-212ENST00000538470 PLEKHG5O94827 1062 aa12.49□□□□□ -0.41
DDB1-212ENST00000538470 BTG4Q9NY30 223 aa12.49□□□□□ -0.41
DDB1-212ENST00000538470 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
DDB1-212ENST00000538470 PLEKHG3A1L390 1219 aa12.48□□□□□ -0.41
DDB1-212ENST00000538470 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
DDB1-212ENST00000538470 ACEP12821 1306 aa12.47□□□□□ -0.41
DDB1-212ENST00000538470 NBPF1Q3BBV0 1214 aa12.47□□□□□ -0.41
DDB1-212ENST00000538470 KRT27Q7Z3Y8 459 aa12.47□□□□□ -0.41
DDB1-212ENST00000538470 PRDM11Q9NQV5 511 aa12.47□□□□□ -0.41
DDB1-212ENST00000538470 TNS1Q9HBL0 1735 aaKnown RBP12.47□□□□□ -0.41
DDB1-212ENST00000538470 AKAP12Q02952 1782 aa12.46□□□□□ -0.41
DDB1-212ENST00000538470 USP19O94966 1318 aa12.46□□□□□ -0.41
DDB1-212ENST00000538470 SPATA31A5Q5VU36 1347 aa12.46□□□□□ -0.41
DDB1-212ENST00000538470 SPATA31A7Q8IWB4 1347 aa12.46□□□□□ -0.41
DDB1-212ENST00000538470 ZRANB1Q9UGI0 708 aa12.46□□□□□ -0.41
DDB1-212ENST00000538470 CPDO75976 1380 aa12.45□□□□□ -0.42
DDB1-212ENST00000538470 SF3B2Q13435 895 aaKnown RBP12.45□□□□□ -0.42
DDB1-212ENST00000538470 NBPF8Q3BBV2 869 aa12.45□□□□□ -0.42
DDB1-212ENST00000538470 USP6P35125 1406 aa12.45□□□□□ -0.42
DDB1-212ENST00000538470 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
DDB1-212ENST00000538470 SLIT3O75094 1523 aa12.44□□□□□ -0.42
DDB1-212ENST00000538470 A0A0G2JS52 829 aa12.44□□□□□ -0.42
DDB1-212ENST00000538470 SRPK2P78362 688 aaKnown RBP12.44□□□□□ -0.42
DDB1-212ENST00000538470 MYT1Q01538 1121 aa12.44□□□□□ -0.42
DDB1-212ENST00000538470 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
DDB1-212ENST00000538470 L3MBTL2Q969R5 705 aa12.44□□□□□ -0.42
DDB1-212ENST00000538470 SSH2Q76I76 1423 aa12.44□□□□□ -0.42
DDB1-212ENST00000538470 ROCK2O75116 1388 aaKnown RBP12.43□□□□□ -0.42
DDB1-212ENST00000538470 PARP4Q9UKK3 1724 aaKnown RBP12.43□□□□□ -0.42
DDB1-212ENST00000538470 WNK3Q9BYP7 1800 aa12.43□□□□□ -0.42
DDB1-212ENST00000538470 LRP5O75197 1615 aa12.43□□□□□ -0.42
DDB1-212ENST00000538470 MON2Q7Z3U7 1717 aa12.42□□□□□ -0.42
DDB1-212ENST00000538470 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
DDB1-212ENST00000538470 DISP2A7MBM2 1401 aa12.42□□□□□ -0.42
DDB1-212ENST00000538470 SPATA31A1Q5TZJ5 1347 aa12.41□□□□□ -0.42
DDB1-212ENST00000538470 EVC2Q86UK5 1308 aa12.41□□□□□ -0.42
DDB1-212ENST00000538470 NLRP13Q86W25 1043 aa12.41□□□□□ -0.42
DDB1-212ENST00000538470 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
DDB1-212ENST00000538470 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
DDB1-212ENST00000538470 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
DDB1-212ENST00000538470 SBNO2Q9Y2G9 1366 aa12.41□□□□□ -0.42
DDB1-212ENST00000538470 BAG6P46379 1132 aa12.4□□□□□ -0.42
DDB1-212ENST00000538470 ZC3H6P61129 1189 aaKnown RBP12.4□□□□□ -0.42
DDB1-212ENST00000538470 CHRNA2Q15822 529 aa12.4□□□□□ -0.42
DDB1-212ENST00000538470 COL5A2P05997 1499 aaPredicted RBP12.4□□□□□ -0.43
DDB1-212ENST00000538470 COL18A1P39060 1754 aa12.39□□□□□ -0.43
DDB1-212ENST00000538470 ABCC6O95255 1503 aa12.39□□□□□ -0.43
DDB1-212ENST00000538470 NUTM2GQ5VZR2 741 aa12.39□□□□□ -0.43
DDB1-212ENST00000538470 DEFB132Q7Z7B7 95 aa12.39□□□□□ -0.43
DDB1-212ENST00000538470 SIN3AQ96ST3 1273 aa12.39□□□□□ -0.43
DDB1-212ENST00000538470 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
DDB1-212ENST00000538470 STRN4Q9NRL3 753 aa12.38□□□□□ -0.43
DDB1-212ENST00000538470 RREB1Q92766 1687 aa12.38□□□□□ -0.43
DDB1-212ENST00000538470 LRRC37A3O60309 1634 aa12.37□□□□□ -0.43
DDB1-212ENST00000538470 SRCAPQ6ZRS2 3230 aa12.37□□□□□ -0.43
DDB1-212ENST00000538470 GCP02774 474 aa12.37□□□□□ -0.43
DDB1-212ENST00000538470 CABP1Q9NZU7 370 aa12.37□□□□□ -0.43
DDB1-212ENST00000538470 CRB1P82279 1406 aa12.37□□□□□ -0.43
DDB1-212ENST00000538470 RGPD3A6NKT7 1758 aaPredicted RBP12.36□□□□□ -0.43
DDB1-212ENST00000538470 RGPD4Q7Z3J3 1758 aa12.36□□□□□ -0.43
DDB1-212ENST00000538470 AATKQ6ZMQ8 1374 aa12.36□□□□□ -0.43
DDB1-212ENST00000538470 NEUROD1Q13562 356 aa12.36□□□□□ -0.43
DDB1-212ENST00000538470 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
DDB1-212ENST00000538470 CPSF1Q10570 1443 aaKnown RBP12.36□□□□□ -0.43
DDB1-212ENST00000538470 PARD3Q8TEW0 1356 aa12.35□□□□□ -0.43
DDB1-212ENST00000538470 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
DDB1-212ENST00000538470 EVA1CP58658 441 aa12.35□□□□□ -0.43
DDB1-212ENST00000538470 TCP11L2Q8N4U5 519 aa12.35□□□□□ -0.43
DDB1-212ENST00000538470 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
DDB1-212ENST00000538470 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
DDB1-212ENST00000538470 NUP188Q5SRE5 1749 aa12.34□□□□□ -0.43
DDB1-212ENST00000538470 NFAT5O94916 1531 aa12.34□□□□□ -0.43
DDB1-212ENST00000538470 NLRP6P59044 892 aa12.34□□□□□ -0.43
DDB1-212ENST00000538470 FAM196AQ6ZSG2 479 aa12.34□□□□□ -0.43
DDB1-212ENST00000538470 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
DDB1-212ENST00000538470 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
DDB1-212ENST00000538470 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
DDB1-212ENST00000538470 LARP1Q6PKG0 1096 aaKnown RBP12.33□□□□□ -0.44
DDB1-212ENST00000538470 KTN1Q86UP2 1357 aaKnown RBP12.32□□□□□ -0.44
DDB1-212ENST00000538470 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
DDB1-212ENST00000538470 KCNH5Q8NCM2 988 aa12.32□□□□□ -0.44
DDB1-212ENST00000538470 LTN1O94822 1766 aa12.32□□□□□ -0.44
DDB1-212ENST00000538470 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
DDB1-212ENST00000538470 OVOS2A0A0G2JMS6 1433 aa12.31□□□□□ -0.44
DDB1-212ENST00000538470 OVOS2A0A0J9YW53 1432 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms