RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
MDM1-208ENST00000538454 HPS1Q92902 700 aa11.24□□□□□ -0.61
MDM1-208ENST00000538454 LILRB3O75022 631 aa11.23□□□□□ -0.61
MDM1-208ENST00000538454 ZNF511Q8NB15 262 aa11.23□□□□□ -0.61
MDM1-208ENST00000538454 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
MDM1-208ENST00000538454 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
MDM1-208ENST00000538454 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
MDM1-208ENST00000538454 MAP10Q9P2G4 905 aa11.23□□□□□ -0.61
MDM1-208ENST00000538454 SIAH2O43255 324 aa11.22□□□□□ -0.61
MDM1-208ENST00000538454 ZNF775Q96BV0 537 aaPredicted RBP11.22□□□□□ -0.61
MDM1-208ENST00000538454 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
MDM1-208ENST00000538454 F12P00748 615 aaPredicted RBP11.21□□□□□ -0.61
MDM1-208ENST00000538454 KDM4CQ9H3R0 1056 aa11.21□□□□□ -0.61
MDM1-208ENST00000538454 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.61
MDM1-208ENST00000538454 WASF2Q9Y6W5 498 aa11.2□□□□□ -0.62
MDM1-208ENST00000538454 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
MDM1-208ENST00000538454 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
MDM1-208ENST00000538454 TLL2Q9Y6L7 1015 aa11.19□□□□□ -0.62
MDM1-208ENST00000538454 VARSP26640 1264 aaKnown RBP11.17□□□□□ -0.62
MDM1-208ENST00000538454 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
MDM1-208ENST00000538454 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
MDM1-208ENST00000538454 FAM117AQ9C073 453 aa11.16□□□□□ -0.62
MDM1-208ENST00000538454 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
MDM1-208ENST00000538454 DDRGK1Q96HY6 314 aa11.15□□□□□ -0.62
MDM1-208ENST00000538454 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
MDM1-208ENST00000538454 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
MDM1-208ENST00000538454 PLEKHG3A1L390 1219 aa11.12□□□□□ -0.63
MDM1-208ENST00000538454 AGERQ15109 404 aa11.12□□□□□ -0.63
MDM1-208ENST00000538454 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
MDM1-208ENST00000538454 FAM174AQ8TBP5 190 aa11.12□□□□□ -0.63
MDM1-208ENST00000538454 MPNDQ8N594 471 aa11.1□□□□□ -0.63
MDM1-208ENST00000538454 ARMC2Q8NEN0 867 aa11.1□□□□□ -0.63
MDM1-208ENST00000538454 CAPN5O15484 640 aaPredicted RBP11.09□□□□□ -0.63
MDM1-208ENST00000538454 NNTQ13423 1086 aa11.09□□□□□ -0.63
MDM1-208ENST00000538454 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
MDM1-208ENST00000538454 SENP2Q9HC62 589 aa11.09□□□□□ -0.63
MDM1-208ENST00000538454 CTDSPL2Q05D32 466 aa11.08□□□□□ -0.64
MDM1-208ENST00000538454 ARID5BQ14865 1188 aa11.08□□□□□ -0.64
MDM1-208ENST00000538454 C4orf48Q5BLP8 95 aa11.08□□□□□ -0.64
MDM1-208ENST00000538454 NBPF14Q5TI25 921 aa11.08□□□□□ -0.64
MDM1-208ENST00000538454 BPHLQ86WA6 291 aaPredicted RBP11.08□□□□□ -0.64
MDM1-208ENST00000538454 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
MDM1-208ENST00000538454 BMP1P13497 986 aa11.07□□□□□ -0.64
MDM1-208ENST00000538454 SNRPBP14678 240 aaKnown RBP11.07□□□□□ -0.64
MDM1-208ENST00000538454 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
MDM1-208ENST00000538454 KIFC2Q96AC6 838 aa11.06□□□□□ -0.64
MDM1-208ENST00000538454 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.06□□□□□ -0.64
MDM1-208ENST00000538454 ADH1CP00326 375 aa11.05□□□□□ -0.64
MDM1-208ENST00000538454 TRIM46Q7Z4K8 759 aa11.04□□□□□ -0.64
MDM1-208ENST00000538454 LRRN4Q8WUT4 740 aa11.04□□□□□ -0.64
MDM1-208ENST00000538454 CDK15Q96Q40 435 aa11.04□□□□□ -0.64
MDM1-208ENST00000538454 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
MDM1-208ENST00000538454 MAGEB6P1A0A0J9YX57 407 aa11.02□□□□□ -0.65
MDM1-208ENST00000538454 WDR4P57081 412 aaKnown RBP11.02□□□□□ -0.65
MDM1-208ENST00000538454 SH3BP5LQ7L8J4 393 aa11.02□□□□□ -0.65
MDM1-208ENST00000538454 SH3RF1Q7Z6J0 888 aa11.02□□□□□ -0.65
MDM1-208ENST00000538454 AP1G2O75843 785 aa11.01□□□□□ -0.65
MDM1-208ENST00000538454 TIMP2P16035 220 aa11.01□□□□□ -0.65
MDM1-208ENST00000538454 NEUROD2Q15784 382 aa11.01□□□□□ -0.65
MDM1-208ENST00000538454 TREML4Q6UXN2 200 aa11.01□□□□□ -0.65
MDM1-208ENST00000538454 GPKOWQ92917 476 aaPredicted RBP eCLIP11.01□□□□□ -0.65
MDM1-208ENST00000538454 C1QTNF2Q9BXJ5 285 aa11.01□□□□□ -0.65
MDM1-208ENST00000538454 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
MDM1-208ENST00000538454 NR6A1Q15406 480 aa10.99□□□□□ -0.65
MDM1-208ENST00000538454 NR3C2P08235 984 aa10.98□□□□□ -0.65
MDM1-208ENST00000538454 NR5A1Q13285 461 aa10.98□□□□□ -0.65
MDM1-208ENST00000538454 WFS1O76024 890 aa10.97□□□□□ -0.65
MDM1-208ENST00000538454 FSHRP23945 695 aa10.97□□□□□ -0.65
MDM1-208ENST00000538454 GRM5P41594 1212 aa10.97□□□□□ -0.65
MDM1-208ENST00000538454 KLF16Q9BXK1 252 aaPredicted RBP10.97□□□□□ -0.65
MDM1-208ENST00000538454 FKBPLQ9UIM3 349 aa10.97□□□□□ -0.65
MDM1-208ENST00000538454 ZIC2O95409 532 aaPredicted RBP10.96□□□□□ -0.65
MDM1-208ENST00000538454 MRPL14Q6P1L8 145 aaKnown RBP10.96□□□□□ -0.65
MDM1-208ENST00000538454 VASH1Q7L8A9 365 aaPredicted RBP10.96□□□□□ -0.65
MDM1-208ENST00000538454 TRMT44Q8IYL2 757 aaKnown RBP10.96□□□□□ -0.65
MDM1-208ENST00000538454 ZFP42Q96MM3 310 aa10.96□□□□□ -0.65
MDM1-208ENST00000538454 ZFAND3Q9H8U3 227 aa10.96□□□□□ -0.65
MDM1-208ENST00000538454 NFX1Q12986 1120 aaKnown RBP10.95□□□□□ -0.66
MDM1-208ENST00000538454 LCE2AQ5TA79 106 aaPredicted RBP10.95□□□□□ -0.66
MDM1-208ENST00000538454 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
MDM1-208ENST00000538454 ITPKCQ96DU7 683 aa10.95□□□□□ -0.66
MDM1-208ENST00000538454 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
MDM1-208ENST00000538454 ARHGAP9Q9BRR9 750 aa10.95□□□□□ -0.66
MDM1-208ENST00000538454 MAP4K5Q9Y4K4 846 aa10.95□□□□□ -0.66
MDM1-208ENST00000538454 USP17L8P0C7I0 530 aa10.94□□□□□ -0.66
MDM1-208ENST00000538454 RFC5P40937 340 aa10.94□□□□□ -0.66
MDM1-208ENST00000538454 ERFEQ4G0M1 354 aa10.94□□□□□ -0.66
MDM1-208ENST00000538454 ZC3H4Q9UPT8 1303 aaKnown RBP10.93□□□□□ -0.66
MDM1-208ENST00000538454 SCARF1Q14162 830 aa10.93□□□□□ -0.66
MDM1-208ENST00000538454 IL27Q8NEV9 243 aa10.93□□□□□ -0.66
MDM1-208ENST00000538454 PURBQ96QR8 312 aaKnown RBP10.93□□□□□ -0.66
MDM1-208ENST00000538454 TERTO14746 1132 aaKnown RBP10.92□□□□□ -0.66
MDM1-208ENST00000538454 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
MDM1-208ENST00000538454 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
MDM1-208ENST00000538454 HMX1Q9NP08 348 aaPredicted RBP10.92□□□□□ -0.66
MDM1-208ENST00000538454 ZBTB33Q86T24 672 aa10.91□□□□□ -0.66
MDM1-208ENST00000538454 SLC10A4Q96EP9 437 aa10.91□□□□□ -0.66
MDM1-208ENST00000538454 BRPF1P55201 1214 aaPredicted RBP10.9□□□□□ -0.66
MDM1-208ENST00000538454 CCDC116Q8IYX3 515 aa10.89□□□□□ -0.67
MDM1-208ENST00000538454 PNMA1Q8ND90 353 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms