RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 BTG4Q9NY30 223 aa24.31■■□□□ 1.48
PTPN6-210ENST00000538318 CRYBG1Q9Y4K1 1723 aa24.31■■□□□ 1.48
PTPN6-210ENST00000538318 COL14A1Q05707 1796 aaKnown RBP24.31■■□□□ 1.48
PTPN6-210ENST00000538318 SRCAPQ6ZRS2 3230 aa24.3■■□□□ 1.48
PTPN6-210ENST00000538318 ZRANB1Q9UGI0 708 aa24.3■■□□□ 1.48
PTPN6-210ENST00000538318 PAK3O75914 559 aaPredicted RBP24.29■■□□□ 1.48
PTPN6-210ENST00000538318 CDK19Q9BWU1 502 aa24.29■■□□□ 1.48
PTPN6-210ENST00000538318 KRT27Q7Z3Y8 459 aa24.27■■□□□ 1.48
PTPN6-210ENST00000538318 NBPF1Q3BBV0 1214 aa24.26■■□□□ 1.47
PTPN6-210ENST00000538318 TOPAZ1Q8N9V7 1692 aa24.25■■□□□ 1.47
PTPN6-210ENST00000538318 CCDC61Q9Y6R9 512 aa24.25■■□□□ 1.47
PTPN6-210ENST00000538318 POLR3AO14802 1390 aaPredicted RBP24.25■■□□□ 1.47
PTPN6-210ENST00000538318 PLEKHG3A1L390 1219 aa24.23■■□□□ 1.47
PTPN6-210ENST00000538318 FAM98CQ17RN3 349 aaKnown RBP24.23■■□□□ 1.47
PTPN6-210ENST00000538318 ACEP12821 1306 aa24.22■■□□□ 1.47
PTPN6-210ENST00000538318 PRDM11Q9NQV5 511 aa24.22■■□□□ 1.47
PTPN6-210ENST00000538318 SPATA31A5Q5VU36 1347 aa24.21■■□□□ 1.47
PTPN6-210ENST00000538318 SPATA31A7Q8IWB4 1347 aa24.21■■□□□ 1.47
PTPN6-210ENST00000538318 SF3B2Q13435 895 aaKnown RBP24.21■■□□□ 1.47
PTPN6-210ENST00000538318 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
PTPN6-210ENST00000538318 DEFB132Q7Z7B7 95 aa24.21■■□□□ 1.47
PTPN6-210ENST00000538318 A0A0G2JS52 829 aa24.2■■□□□ 1.46
PTPN6-210ENST00000538318 MYT1Q01538 1121 aa24.2■■□□□ 1.46
PTPN6-210ENST00000538318 PHRF1Q9P1Y6 1649 aaKnown RBP24.19■■□□□ 1.46
PTPN6-210ENST00000538318 KIAA0232Q92628 1395 aa24.18■■□□□ 1.46
PTPN6-210ENST00000538318 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
PTPN6-210ENST00000538318 NUTM2GQ5VZR2 741 aa24.16■■□□□ 1.46
PTPN6-210ENST00000538318 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
PTPN6-210ENST00000538318 CHRNA2Q15822 529 aa24.14■■□□□ 1.45
PTPN6-210ENST00000538318 ZC3H6P61129 1189 aaKnown RBP24.13■■□□□ 1.45
PTPN6-210ENST00000538318 SRPK2P78362 688 aaKnown RBP24.13■■□□□ 1.45
PTPN6-210ENST00000538318 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
PTPN6-210ENST00000538318 SPATA31A1Q5TZJ5 1347 aa24.12■■□□□ 1.45
PTPN6-210ENST00000538318 PPIP5K1Q6PFW1 1433 aa24.12■■□□□ 1.45
PTPN6-210ENST00000538318 ABTB2Q8N961 1025 aa24.12■■□□□ 1.45
PTPN6-210ENST00000538318 CABP2Q9NPB3 220 aa24.11■■□□□ 1.45
PTPN6-210ENST00000538318 QRICH2Q9H0J4 1663 aa24.11■■□□□ 1.45
PTPN6-210ENST00000538318 BAG6P46379 1132 aa24.1■■□□□ 1.45
PTPN6-210ENST00000538318 NRKQ7Z2Y5 1582 aa24.1■■□□□ 1.45
PTPN6-210ENST00000538318 USP19O94966 1318 aa24.1■■□□□ 1.45
PTPN6-210ENST00000538318 STRN4Q9NRL3 753 aa24.09■■□□□ 1.45
PTPN6-210ENST00000538318 BRD4O60885 1362 aaPredicted RBP24.08■■□□□ 1.45
PTPN6-210ENST00000538318 CPDO75976 1380 aa24.08■■□□□ 1.45
PTPN6-210ENST00000538318 FAM182BQ5T319 152 aa24.07■■□□□ 1.44
PTPN6-210ENST00000538318 NLRP13Q86W25 1043 aa24.07■■□□□ 1.44
PTPN6-210ENST00000538318 RGPD1P0DJD0 1748 aa24.07■■□□□ 1.44
PTPN6-210ENST00000538318 SIN3AQ96ST3 1273 aa24.06■■□□□ 1.44
PTPN6-210ENST00000538318 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
PTPN6-210ENST00000538318 SSH2Q76I76 1423 aa24.05■■□□□ 1.44
PTPN6-210ENST00000538318 TRPM1Q7Z4N2 1603 aa24.05■■□□□ 1.44
PTPN6-210ENST00000538318 LMO7Q8WWI1 1683 aa24.05■■□□□ 1.44
PTPN6-210ENST00000538318 GCP02774 474 aa24.04■■□□□ 1.44
PTPN6-210ENST00000538318 EVA1CP58658 441 aa24.04■■□□□ 1.44
PTPN6-210ENST00000538318 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
PTPN6-210ENST00000538318 BARGINQ6ZT62 677 aa24.03■■□□□ 1.44
PTPN6-210ENST00000538318 USP6P35125 1406 aa24.02■■□□□ 1.44
PTPN6-210ENST00000538318 USP35Q9P2H5 1018 aa24.02■■□□□ 1.44
PTPN6-210ENST00000538318 DISP2A7MBM2 1401 aa24.01■■□□□ 1.43
PTPN6-210ENST00000538318 EN1Q05925 392 aaPredicted RBP24.01■■□□□ 1.43
PTPN6-210ENST00000538318 LARP1Q6PKG0 1096 aaKnown RBP24.01■■□□□ 1.43
PTPN6-210ENST00000538318 FAM196AQ6ZSG2 479 aa24.01■■□□□ 1.43
PTPN6-210ENST00000538318 EVC2Q86UK5 1308 aa24.01■■□□□ 1.43
PTPN6-210ENST00000538318 TNS1Q9HBL0 1735 aaKnown RBP24.01■■□□□ 1.43
PTPN6-210ENST00000538318 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
PTPN6-210ENST00000538318 TCP11L2Q8N4U5 519 aa23.98■■□□□ 1.43
PTPN6-210ENST00000538318 ROCK2O75116 1388 aaKnown RBP23.98■■□□□ 1.43
PTPN6-210ENST00000538318 NLRP6P59044 892 aa23.97■■□□□ 1.43
PTPN6-210ENST00000538318 SLIT3O75094 1523 aa23.96■■□□□ 1.43
PTPN6-210ENST00000538318 COL5A2P05997 1499 aaPredicted RBP23.96■■□□□ 1.43
PTPN6-210ENST00000538318 THRAP3Q9Y2W1 955 aaKnown RBP23.96■■□□□ 1.43
PTPN6-210ENST00000538318 LRP5O75197 1615 aa23.95■■□□□ 1.43
PTPN6-210ENST00000538318 TRIM37O94972 964 aa23.95■■□□□ 1.42
PTPN6-210ENST00000538318 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
PTPN6-210ENST00000538318 PSDA5PKW4 1024 aaPredicted RBP23.94■■□□□ 1.42
PTPN6-210ENST00000538318 AATKQ6ZMQ8 1374 aa23.93■■□□□ 1.42
PTPN6-210ENST00000538318 PIK3C2AO00443 1686 aa23.93■■□□□ 1.42
PTPN6-210ENST00000538318 ZNF692Q9BU19 519 aaPredicted RBP23.93■■□□□ 1.42
PTPN6-210ENST00000538318 EZH2Q15910 746 aaKnown RBP23.92■■□□□ 1.42
PTPN6-210ENST00000538318 CAMKK2Q96RR4 588 aa23.92■■□□□ 1.42
PTPN6-210ENST00000538318 CRB1P82279 1406 aa23.91■■□□□ 1.42
PTPN6-210ENST00000538318 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
PTPN6-210ENST00000538318 AKAP12Q02952 1782 aa23.9■■□□□ 1.42
PTPN6-210ENST00000538318 TTC21BQ7Z4L5 1316 aa23.89■■□□□ 1.42
PTPN6-210ENST00000538318 COL18A1P39060 1754 aa23.89■■□□□ 1.42
PTPN6-210ENST00000538318 APBA3O96018 575 aa23.89■■□□□ 1.41
PTPN6-210ENST00000538318 PARD3Q8TEW0 1356 aa23.89■■□□□ 1.41
PTPN6-210ENST00000538318 ZBTB7CA1YPR0 619 aa23.88■■□□□ 1.41
PTPN6-210ENST00000538318 CPSF1Q10570 1443 aaKnown RBP23.87■■□□□ 1.41
PTPN6-210ENST00000538318 R3HDM1Q15032 1099 aaKnown RBP23.87■■□□□ 1.41
PTPN6-210ENST00000538318 TTC21AQ8NDW8 1320 aa23.86■■□□□ 1.41
PTPN6-210ENST00000538318 SBNO2Q9Y2G9 1366 aa23.86■■□□□ 1.41
PTPN6-210ENST00000538318 KCNH5Q8NCM2 988 aa23.85■■□□□ 1.41
PTPN6-210ENST00000538318 AXIN2Q9Y2T1 843 aa23.85■■□□□ 1.41
PTPN6-210ENST00000538318 C11orf95C9JLR9 678 aaPredicted RBP23.84■■□□□ 1.41
PTPN6-210ENST00000538318 ARHGEF25Q86VW2 580 aa23.84■■□□□ 1.41
PTPN6-210ENST00000538318 TOM1L2Q6ZVM7 507 aa23.83■■□□□ 1.41
PTPN6-210ENST00000538318 RREB1Q92766 1687 aa23.83■■□□□ 1.4
PTPN6-210ENST00000538318 KTN1Q86UP2 1357 aaKnown RBP23.82■■□□□ 1.4
PTPN6-210ENST00000538318 WDR17Q8IZU2 1322 aa23.82■■□□□ 1.4
PTPN6-210ENST00000538318 PEAK1Q9H792 1746 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms