RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 HDGFP51858 240 aaKnown RBP14.2□□□□□ -0.14
CLIP1-210ENST00000538120 NSD2O96028 1365 aa14.2□□□□□ -0.14
CLIP1-210ENST00000538120 TNNT2P45379 298 aaPredicted RBP14.2□□□□□ -0.14
CLIP1-210ENST00000538120 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
CLIP1-210ENST00000538120 CCDC146Q8IYE0 955 aa14.19□□□□□ -0.14
CLIP1-210ENST00000538120 NLRP1Q9C000 1473 aa14.19□□□□□ -0.14
CLIP1-210ENST00000538120 RCAN3Q9UKA8 241 aa14.18□□□□□ -0.14
CLIP1-210ENST00000538120 LTKP29376 864 aa14.18□□□□□ -0.14
CLIP1-210ENST00000538120 SIRT1Q96EB6 747 aa14.18□□□□□ -0.14
CLIP1-210ENST00000538120 TECPR2O15040 1411 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 ADAMTS13Q76LX8 1427 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 CABP1Q9NZU7 370 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 MTHFSP49914 203 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 TMEM132AQ24JP5 1023 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 TXNDC2Q86VQ3 553 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 TERF2IPQ9NYB0 399 aa14.17□□□□□ -0.14
CLIP1-210ENST00000538120 C3P01024 1663 aa14.16□□□□□ -0.14
CLIP1-210ENST00000538120 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
CLIP1-210ENST00000538120 APAF1O14727 1248 aa14.16□□□□□ -0.14
CLIP1-210ENST00000538120 FYB1O15117 783 aa14.16□□□□□ -0.14
CLIP1-210ENST00000538120 RRP1P56182 461 aaKnown RBP14.16□□□□□ -0.14
CLIP1-210ENST00000538120 FAM135BQ49AJ0 1406 aa14.16□□□□□ -0.14
CLIP1-210ENST00000538120 PLEKHG1Q9ULL1 1385 aa14.15□□□□□ -0.14
CLIP1-210ENST00000538120 GGNBP2Q9H3C7 697 aa14.15□□□□□ -0.14
CLIP1-210ENST00000538120 KNDC1Q76NI1 1749 aa14.15□□□□□ -0.14
CLIP1-210ENST00000538120 WASLO00401 505 aaPredicted RBP14.14□□□□□ -0.15
CLIP1-210ENST00000538120 DUSP27Q5VZP5 1158 aa14.14□□□□□ -0.15
CLIP1-210ENST00000538120 CPS1P31327 1500 aa14.14□□□□□ -0.15
CLIP1-210ENST00000538120 MED14O60244 1454 aa14.13□□□□□ -0.15
CLIP1-210ENST00000538120 PAK3O75914 559 aaPredicted RBP14.13□□□□□ -0.15
CLIP1-210ENST00000538120 VASPP50552 380 aaPredicted RBP14.13□□□□□ -0.15
CLIP1-210ENST00000538120 HDGFL2Q7Z4V5 671 aaPredicted RBP14.13□□□□□ -0.15
CLIP1-210ENST00000538120 ARHGAP23Q9P227 1491 aa14.12□□□□□ -0.15
CLIP1-210ENST00000538120 FER1L4A9Z1Z3 1794 aa14.12□□□□□ -0.15
CLIP1-210ENST00000538120 ROBO2Q9HCK4 1378 aa14.12□□□□□ -0.15
CLIP1-210ENST00000538120 GOLGA2Q08379 1002 aa14.12□□□□□ -0.15
CLIP1-210ENST00000538120 SLFN5Q08AF3 891 aa14.12□□□□□ -0.15
CLIP1-210ENST00000538120 TRMT2AQ8IZ69 625 aaKnown RBP14.12□□□□□ -0.15
CLIP1-210ENST00000538120 ATP7BP35670 1465 aa14.12□□□□□ -0.15
CLIP1-210ENST00000538120 SLIT1O75093 1534 aa14.11□□□□□ -0.15
CLIP1-210ENST00000538120 CPSF1Q10570 1443 aaKnown RBP14.1□□□□□ -0.15
CLIP1-210ENST00000538120 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
CLIP1-210ENST00000538120 PTPRUQ92729 1446 aa14.1□□□□□ -0.15
CLIP1-210ENST00000538120 ANKRD26Q9UPS8 1709 aa14.09□□□□□ -0.15
CLIP1-210ENST00000538120 NBR1Q14596 966 aa14.09□□□□□ -0.15
CLIP1-210ENST00000538120 NGEFQ8N5V2 710 aa14.09□□□□□ -0.15
CLIP1-210ENST00000538120 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
CLIP1-210ENST00000538120 PPIP5K1Q6PFW1 1433 aa14.09□□□□□ -0.15
CLIP1-210ENST00000538120 COL3A1P02461 1466 aaPredicted RBP14.08□□□□□ -0.15
CLIP1-210ENST00000538120 DEKP35659 375 aaKnown RBP14.08□□□□□ -0.15
CLIP1-210ENST00000538120 RUNDC1Q96C34 613 aa14.08□□□□□ -0.15
CLIP1-210ENST00000538120 SLC26A8Q96RN1 970 aa14.08□□□□□ -0.15
CLIP1-210ENST00000538120 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.15
CLIP1-210ENST00000538120 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.15
CLIP1-210ENST00000538120 IQSEC2Q5JU85 1478 aa14.08□□□□□ -0.16
CLIP1-210ENST00000538120 CCDC136Q96JN2 1154 aa14.08□□□□□ -0.16
CLIP1-210ENST00000538120 EID1Q9Y6B2 187 aa14.08□□□□□ -0.16
CLIP1-210ENST00000538120 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
CLIP1-210ENST00000538120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLIP1-210ENST00000538120 EXOC6Q8TAG9 804 aa14.06□□□□□ -0.16
CLIP1-210ENST00000538120 PLIN1O60240 522 aa14.06□□□□□ -0.16
CLIP1-210ENST00000538120 WWC1Q8IX03 1113 aa14.06□□□□□ -0.16
CLIP1-210ENST00000538120 THEMISQ8N1K5 641 aaPredicted RBP14.06□□□□□ -0.16
CLIP1-210ENST00000538120 TCP11L2Q8N4U5 519 aa14.06□□□□□ -0.16
CLIP1-210ENST00000538120 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
CLIP1-210ENST00000538120 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
CLIP1-210ENST00000538120 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.06□□□□□ -0.16
CLIP1-210ENST00000538120 KIF20BQ96Q89 1820 aa14.05□□□□□ -0.16
CLIP1-210ENST00000538120 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
CLIP1-210ENST00000538120 EDC4Q6P2E9 1401 aaKnown RBP14.04□□□□□ -0.16
CLIP1-210ENST00000538120 E9PSI1 815 aa14.04□□□□□ -0.16
CLIP1-210ENST00000538120 ADGRB2O60241 1585 aa14.04□□□□□ -0.16
CLIP1-210ENST00000538120 CDC42BPGQ6DT37 1551 aa14.04□□□□□ -0.16
CLIP1-210ENST00000538120 U2AF1L5P0DN76 240 aaPredicted RBP14.04□□□□□ -0.16
CLIP1-210ENST00000538120 U2AF1Q01081 240 aaKnown RBP eCLIP14.04□□□□□ -0.16
CLIP1-210ENST00000538120 RRP7AQ9Y3A4 280 aaKnown RBP14.04□□□□□ -0.16
CLIP1-210ENST00000538120 PRR29P0C7W0 189 aa14.03□□□□□ -0.16
CLIP1-210ENST00000538120 FBLN1P23142 703 aa14.03□□□□□ -0.16
CLIP1-210ENST00000538120 AMOTL2Q9Y2J4 779 aa14.03□□□□□ -0.16
CLIP1-210ENST00000538120 NME9Q86XW9 330 aa14.02□□□□□ -0.16
CLIP1-210ENST00000538120 PLEKHF1Q96S99 279 aa14.02□□□□□ -0.16
CLIP1-210ENST00000538120 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.16
CLIP1-210ENST00000538120 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.17
CLIP1-210ENST00000538120 POLKQ9UBT6 870 aa14.02□□□□□ -0.17
CLIP1-210ENST00000538120 NEUROD2Q15784 382 aa14.01□□□□□ -0.17
CLIP1-210ENST00000538120 CCDC27Q2M243 656 aa14.01□□□□□ -0.17
CLIP1-210ENST00000538120 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
CLIP1-210ENST00000538120 CHRDL2Q6WN34 429 aa14.01□□□□□ -0.17
CLIP1-210ENST00000538120 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
CLIP1-210ENST00000538120 CRBNQ96SW2 442 aa14□□□□□ -0.17
CLIP1-210ENST00000538120 CEP170BQ9Y4F5 1589 aaPredicted RBP14□□□□□ -0.17
CLIP1-210ENST00000538120 RIMS1Q86UR5 1692 aaKnown RBP14□□□□□ -0.17
CLIP1-210ENST00000538120 PTCH1Q13635 1447 aa13.99□□□□□ -0.17
CLIP1-210ENST00000538120 U2SURPO15042 1029 aaKnown RBP13.99□□□□□ -0.17
CLIP1-210ENST00000538120 DIAPH1O60610 1272 aaKnown RBP13.99□□□□□ -0.17
CLIP1-210ENST00000538120 WDR63Q8IWG1 891 aa13.99□□□□□ -0.17
CLIP1-210ENST00000538120 DIP2AQ14689 1571 aa13.99□□□□□ -0.17
CLIP1-210ENST00000538120 AKAP12Q02952 1782 aa13.99□□□□□ -0.17
CLIP1-210ENST00000538120 PLEKHG3A1L390 1219 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms