RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 ATAD2Q6PL18 1390 aa21.48■■□□□ 1.03
LRRK1-211ENST00000538064 GJD4Q96KN9 370 aaPredicted RBP21.48■■□□□ 1.03
LRRK1-211ENST00000538064 BRWD3Q6RI45 1802 aa21.48■■□□□ 1.03
LRRK1-211ENST00000538064 PLEKHG5O94827 1062 aa21.45■■□□□ 1.02
LRRK1-211ENST00000538064 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
LRRK1-211ENST00000538064 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
LRRK1-211ENST00000538064 CCDC61Q9Y6R9 512 aa21.44■■□□□ 1.02
LRRK1-211ENST00000538064 ROCK2O75116 1388 aaKnown RBP21.43■■□□□ 1.02
LRRK1-211ENST00000538064 PPIP5K1Q6PFW1 1433 aa21.43■■□□□ 1.02
LRRK1-211ENST00000538064 NRKQ7Z2Y5 1582 aa21.43■■□□□ 1.02
LRRK1-211ENST00000538064 PLEKHG3A1L390 1219 aa21.42■■□□□ 1.02
LRRK1-211ENST00000538064 PAK3O75914 559 aaPredicted RBP21.42■■□□□ 1.02
LRRK1-211ENST00000538064 ACEP12821 1306 aa21.42■■□□□ 1.02
LRRK1-211ENST00000538064 VPS72Q15906 364 aa21.42■■□□□ 1.02
LRRK1-211ENST00000538064 EP400Q96L91 3159 aa21.41■■□□□ 1.02
LRRK1-211ENST00000538064 FAM83GA6ND36 823 aa21.4■■□□□ 1.02
LRRK1-211ENST00000538064 SRPK2P78362 688 aaKnown RBP21.4■■□□□ 1.02
LRRK1-211ENST00000538064 NBPF8Q3BBV2 869 aa21.38■■□□□ 1.01
LRRK1-211ENST00000538064 AKAP12Q02952 1782 aa21.38■■□□□ 1.01
LRRK1-211ENST00000538064 CABP2Q9NPB3 220 aa21.37■■□□□ 1.01
LRRK1-211ENST00000538064 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
LRRK1-211ENST00000538064 BTG4Q9NY30 223 aa21.35■■□□□ 1.01
LRRK1-211ENST00000538064 USP6P35125 1406 aa21.34■■□□□ 1.01
LRRK1-211ENST00000538064 KIAA0232Q92628 1395 aa21.34■■□□□ 1.01
LRRK1-211ENST00000538064 TONSLQ96HA7 1378 aa21.34■■□□□ 1.01
LRRK1-211ENST00000538064 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
LRRK1-211ENST00000538064 LMO7Q8WWI1 1683 aa21.34■■□□□ 1.01
LRRK1-211ENST00000538064 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
LRRK1-211ENST00000538064 EVC2Q86UK5 1308 aa21.33■■□□□ 1.01
LRRK1-211ENST00000538064 PRDM11Q9NQV5 511 aa21.33■■□□□ 1.01
LRRK1-211ENST00000538064 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1.01
LRRK1-211ENST00000538064 USP19O94966 1318 aa21.32■■□□□ 1
LRRK1-211ENST00000538064 ONECUT3O60422 494 aaPredicted RBP21.32■■□□□ 1
LRRK1-211ENST00000538064 SBNO2Q9Y2G9 1366 aa21.32■■□□□ 1
LRRK1-211ENST00000538064 SEPT12Q8IYM1 358 aa21.31■■□□□ 1
LRRK1-211ENST00000538064 MON2Q7Z3U7 1717 aa21.31■■□□□ 1
LRRK1-211ENST00000538064 NUTM2GQ5VZR2 741 aa21.3■■□□□ 1
LRRK1-211ENST00000538064 SLIT3O75094 1523 aa21.29■■□□□ 1
LRRK1-211ENST00000538064 CPDO75976 1380 aa21.29■■□□□ 1
LRRK1-211ENST00000538064 ABTB2Q8N961 1025 aa21.29■■□□□ 1
LRRK1-211ENST00000538064 SSH2Q76I76 1423 aa21.29■■□□□ 1
LRRK1-211ENST00000538064 CABP1Q9NZU7 370 aa21.28■■□□□ 1
LRRK1-211ENST00000538064 SPATA31A5Q5VU36 1347 aa21.28■■□□□ 1
LRRK1-211ENST00000538064 SPATA31A7Q8IWB4 1347 aa21.28■■□□□ 1
LRRK1-211ENST00000538064 CCDC125Q86Z20 511 aa21.27■■□□□ 1
LRRK1-211ENST00000538064 BLMP54132 1417 aaPredicted RBP21.27■■□□□ 1
LRRK1-211ENST00000538064 CAMTA1Q9Y6Y1 1673 aa21.25■□□□□ 0.99
LRRK1-211ENST00000538064 CHRNA2Q15822 529 aa21.25■□□□□ 0.99
LRRK1-211ENST00000538064 CARD11Q9BXL7 1154 aa21.25■□□□□ 0.99
LRRK1-211ENST00000538064 RGPD1P0DJD0 1748 aa21.24■□□□□ 0.99
LRRK1-211ENST00000538064 ZC3H6P61129 1189 aaKnown RBP21.24■□□□□ 0.99
LRRK1-211ENST00000538064 FAM98CQ17RN3 349 aaKnown RBP21.24■□□□□ 0.99
LRRK1-211ENST00000538064 NLRP13Q86W25 1043 aa21.24■□□□□ 0.99
LRRK1-211ENST00000538064 KRT27Q7Z3Y8 459 aa21.23■□□□□ 0.99
LRRK1-211ENST00000538064 USP54Q70EL1 1684 aa21.23■□□□□ 0.99
LRRK1-211ENST00000538064 CPSF1Q10570 1443 aaKnown RBP21.22■□□□□ 0.99
LRRK1-211ENST00000538064 A0A0G2JS52 829 aa21.22■□□□□ 0.99
LRRK1-211ENST00000538064 MYT1Q01538 1121 aa21.22■□□□□ 0.99
LRRK1-211ENST00000538064 SPATA31A1Q5TZJ5 1347 aa21.22■□□□□ 0.99
LRRK1-211ENST00000538064 COL18A1P39060 1754 aa21.21■□□□□ 0.99
LRRK1-211ENST00000538064 GCP02774 474 aa21.2■□□□□ 0.98
LRRK1-211ENST00000538064 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
LRRK1-211ENST00000538064 TNS1Q9HBL0 1735 aaKnown RBP21.19■□□□□ 0.98
LRRK1-211ENST00000538064 STRN4Q9NRL3 753 aa21.19■□□□□ 0.98
LRRK1-211ENST00000538064 WNK3Q9BYP7 1800 aa21.19■□□□□ 0.98
LRRK1-211ENST00000538064 PARP4Q9UKK3 1724 aaKnown RBP21.18■□□□□ 0.98
LRRK1-211ENST00000538064 ZNF692Q9BU19 519 aaPredicted RBP21.18■□□□□ 0.98
LRRK1-211ENST00000538064 NLRP6P59044 892 aa21.17■□□□□ 0.98
LRRK1-211ENST00000538064 TTC21BQ7Z4L5 1316 aa21.17■□□□□ 0.98
LRRK1-211ENST00000538064 TTC21AQ8NDW8 1320 aa21.17■□□□□ 0.98
LRRK1-211ENST00000538064 CD163L1Q9NR16 1453 aa21.17■□□□□ 0.98
LRRK1-211ENST00000538064 NFAT5O94916 1531 aa21.16■□□□□ 0.98
LRRK1-211ENST00000538064 KTN1Q86UP2 1357 aaKnown RBP21.16■□□□□ 0.98
LRRK1-211ENST00000538064 RGPD5Q99666 1765 aa21.15■□□□□ 0.98
LRRK1-211ENST00000538064 AATKQ6ZMQ8 1374 aa21.15■□□□□ 0.98
LRRK1-211ENST00000538064 ABCC6O95255 1503 aa21.14■□□□□ 0.98
LRRK1-211ENST00000538064 EVA1CP58658 441 aa21.14■□□□□ 0.97
LRRK1-211ENST00000538064 SF3B2Q13435 895 aaKnown RBP21.13■□□□□ 0.97
LRRK1-211ENST00000538064 BARGINQ6ZT62 677 aa21.13■□□□□ 0.97
LRRK1-211ENST00000538064 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
LRRK1-211ENST00000538064 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
LRRK1-211ENST00000538064 CRB1P82279 1406 aa21.12■□□□□ 0.97
LRRK1-211ENST00000538064 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
LRRK1-211ENST00000538064 LTN1O94822 1766 aa21.11■□□□□ 0.97
LRRK1-211ENST00000538064 DEFB132Q7Z7B7 95 aa21.1■□□□□ 0.97
LRRK1-211ENST00000538064 PUS7Q96PZ0 661 aaKnown RBP21.1■□□□□ 0.97
LRRK1-211ENST00000538064 USP35Q9P2H5 1018 aa21.1■□□□□ 0.97
LRRK1-211ENST00000538064 ZRANB1Q9UGI0 708 aa21.1■□□□□ 0.97
LRRK1-211ENST00000538064 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
LRRK1-211ENST00000538064 KCNH5Q8NCM2 988 aa21.09■□□□□ 0.97
LRRK1-211ENST00000538064 THRAP3Q9Y2W1 955 aaKnown RBP21.09■□□□□ 0.97
LRRK1-211ENST00000538064 DISP2A7MBM2 1401 aa21.09■□□□□ 0.97
LRRK1-211ENST00000538064 USP31Q70CQ4 1352 aa21.09■□□□□ 0.97
LRRK1-211ENST00000538064 EDC4Q6P2E9 1401 aaKnown RBP21.08■□□□□ 0.97
LRRK1-211ENST00000538064 TESK2Q96S53 571 aa21.08■□□□□ 0.97
LRRK1-211ENST00000538064 NINLQ9Y2I6 1382 aa21.08■□□□□ 0.96
LRRK1-211ENST00000538064 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
LRRK1-211ENST00000538064 A0A1W2PP64 1363 aa21.07■□□□□ 0.96
LRRK1-211ENST00000538064 FAM182BQ5T319 152 aa21.06■□□□□ 0.96
LRRK1-211ENST00000538064 TMC1Q8TDI8 760 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms