RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 EVC2Q86UK5 1308 aa11.96□□□□□ -0.49
SPARC-208ENST00000538026 FAM83GA6ND36 823 aa11.96□□□□□ -0.49
SPARC-208ENST00000538026 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
SPARC-208ENST00000538026 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.49
SPARC-208ENST00000538026 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
SPARC-208ENST00000538026 SLIT2O94813 1529 aa11.96□□□□□ -0.5
SPARC-208ENST00000538026 ARHGEF10O15013 1369 aa11.95□□□□□ -0.5
SPARC-208ENST00000538026 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
SPARC-208ENST00000538026 SRCAPQ6ZRS2 3230 aa11.95□□□□□ -0.5
SPARC-208ENST00000538026 CD163L1Q9NR16 1453 aa11.95□□□□□ -0.5
SPARC-208ENST00000538026 ATRNO75882 1429 aa11.94□□□□□ -0.5
SPARC-208ENST00000538026 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
SPARC-208ENST00000538026 NUTM2GQ5VZR2 741 aa11.94□□□□□ -0.5
SPARC-208ENST00000538026 USP21Q9UK80 565 aa11.94□□□□□ -0.5
SPARC-208ENST00000538026 AKAP12Q02952 1782 aa11.94□□□□□ -0.5
SPARC-208ENST00000538026 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
SPARC-208ENST00000538026 RXRBP28702 533 aa11.93□□□□□ -0.5
SPARC-208ENST00000538026 USP6P35125 1406 aa11.93□□□□□ -0.5
SPARC-208ENST00000538026 SLC12A5Q9H2X9 1139 aa11.92□□□□□ -0.5
SPARC-208ENST00000538026 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
SPARC-208ENST00000538026 USP47Q96K76 1375 aa11.92□□□□□ -0.5
SPARC-208ENST00000538026 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
SPARC-208ENST00000538026 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.91□□□□□ -0.5
SPARC-208ENST00000538026 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
SPARC-208ENST00000538026 USP19O94966 1318 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 RGS12O14924 1447 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 GLI3P10071 1580 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
SPARC-208ENST00000538026 NRAPQ86VF7 1730 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 UNC5CLQ8IV45 518 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 ABTB2Q8N961 1025 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 TRPC5Q9UL62 973 aaPredicted RBP11.9□□□□□ -0.5
SPARC-208ENST00000538026 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
SPARC-208ENST00000538026 TTC21BQ7Z4L5 1316 aa11.89□□□□□ -0.51
SPARC-208ENST00000538026 MON2Q7Z3U7 1717 aa11.89□□□□□ -0.51
SPARC-208ENST00000538026 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
SPARC-208ENST00000538026 NRKQ7Z2Y5 1582 aa11.89□□□□□ -0.51
SPARC-208ENST00000538026 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
SPARC-208ENST00000538026 KIAA0232Q92628 1395 aa11.89□□□□□ -0.51
SPARC-208ENST00000538026 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
SPARC-208ENST00000538026 ZC3H6P61129 1189 aaKnown RBP11.88□□□□□ -0.51
SPARC-208ENST00000538026 CHRNA2Q15822 529 aa11.88□□□□□ -0.51
SPARC-208ENST00000538026 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
SPARC-208ENST00000538026 BRD4O60885 1362 aaPredicted RBP11.88□□□□□ -0.51
SPARC-208ENST00000538026 COL14A1Q05707 1796 aaKnown RBP11.87□□□□□ -0.51
SPARC-208ENST00000538026 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
SPARC-208ENST00000538026 BTG4Q9NY30 223 aa11.87□□□□□ -0.51
SPARC-208ENST00000538026 SLIT3O75094 1523 aa11.86□□□□□ -0.51
SPARC-208ENST00000538026 GCP02774 474 aa11.86□□□□□ -0.51
SPARC-208ENST00000538026 HAP1P54257 671 aaPredicted RBP11.86□□□□□ -0.51
SPARC-208ENST00000538026 VPS72Q15906 364 aa11.86□□□□□ -0.51
SPARC-208ENST00000538026 CAMTA1Q9Y6Y1 1673 aa11.86□□□□□ -0.51
SPARC-208ENST00000538026 COL18A1P39060 1754 aa11.86□□□□□ -0.51
SPARC-208ENST00000538026 BRWD3Q6RI45 1802 aa11.86□□□□□ -0.51
SPARC-208ENST00000538026 LMO7Q8WWI1 1683 aa11.85□□□□□ -0.51
SPARC-208ENST00000538026 A0A1W2PP64 1363 aa11.85□□□□□ -0.51
SPARC-208ENST00000538026 CPDO75976 1380 aa11.85□□□□□ -0.51
SPARC-208ENST00000538026 KTN1Q86UP2 1357 aaKnown RBP11.85□□□□□ -0.51
SPARC-208ENST00000538026 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
SPARC-208ENST00000538026 NLRP6P59044 892 aa11.85□□□□□ -0.51
SPARC-208ENST00000538026 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
SPARC-208ENST00000538026 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
SPARC-208ENST00000538026 NME9Q86XW9 330 aa11.84□□□□□ -0.51
SPARC-208ENST00000538026 PRDM11Q9NQV5 511 aa11.84□□□□□ -0.51
SPARC-208ENST00000538026 C11orf95C9JLR9 678 aaPredicted RBP11.83□□□□□ -0.52
SPARC-208ENST00000538026 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.83□□□□□ -0.52
SPARC-208ENST00000538026 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
SPARC-208ENST00000538026 TTC21AQ8NDW8 1320 aa11.83□□□□□ -0.52
SPARC-208ENST00000538026 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
SPARC-208ENST00000538026 USP31Q70CQ4 1352 aa11.82□□□□□ -0.52
SPARC-208ENST00000538026 NFAT5O94916 1531 aa11.82□□□□□ -0.52
SPARC-208ENST00000538026 USP54Q70EL1 1684 aa11.82□□□□□ -0.52
SPARC-208ENST00000538026 HSPA5P11021 654 aaKnown RBP11.82□□□□□ -0.52
SPARC-208ENST00000538026 AXIN2Q9Y2T1 843 aa11.82□□□□□ -0.52
SPARC-208ENST00000538026 SPATA31A5Q5VU36 1347 aa11.82□□□□□ -0.52
SPARC-208ENST00000538026 SPATA31A7Q8IWB4 1347 aa11.82□□□□□ -0.52
SPARC-208ENST00000538026 TMF1P82094 1093 aa11.81□□□□□ -0.52
SPARC-208ENST00000538026 ARHGEF25Q86VW2 580 aa11.81□□□□□ -0.52
SPARC-208ENST00000538026 CARD14Q9BXL6 1004 aa11.81□□□□□ -0.52
SPARC-208ENST00000538026 MYOM1P52179 1685 aa11.81□□□□□ -0.52
SPARC-208ENST00000538026 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
SPARC-208ENST00000538026 LARP1Q6PKG0 1096 aaKnown RBP11.8□□□□□ -0.52
SPARC-208ENST00000538026 SLC24A1O60721 1099 aa11.79□□□□□ -0.52
SPARC-208ENST00000538026 FBLN1P23142 703 aa11.79□□□□□ -0.52
SPARC-208ENST00000538026 FAM98CQ17RN3 349 aaKnown RBP11.79□□□□□ -0.52
SPARC-208ENST00000538026 HDGFL2Q7Z4V5 671 aaPredicted RBP11.79□□□□□ -0.52
SPARC-208ENST00000538026 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
SPARC-208ENST00000538026 TERF2IPQ9NYB0 399 aa11.79□□□□□ -0.52
SPARC-208ENST00000538026 SPATA31A1Q5TZJ5 1347 aa11.79□□□□□ -0.52
SPARC-208ENST00000538026 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
SPARC-208ENST00000538026 OVOS2A0A0J9YW53 1432 aa11.78□□□□□ -0.52
SPARC-208ENST00000538026 OVOS2Q6IE36 1432 aa11.78□□□□□ -0.52
SPARC-208ENST00000538026 COL5A2P05997 1499 aaPredicted RBP11.78□□□□□ -0.52
SPARC-208ENST00000538026 SOX12O15370 315 aa11.78□□□□□ -0.52
SPARC-208ENST00000538026 STRN4Q9NRL3 753 aa11.78□□□□□ -0.52
SPARC-208ENST00000538026 ANKRD36BQ8N2N9 1353 aa11.78□□□□□ -0.52
SPARC-208ENST00000538026 NINLQ9Y2I6 1382 aa11.78□□□□□ -0.52
SPARC-208ENST00000538026 FYB1O15117 783 aa11.77□□□□□ -0.53
SPARC-208ENST00000538026 EIF4G2P78344 907 aaKnown RBP eCLIP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms