RNA–Protein interactions for RNA: ENST00000537392.1

PMFBP1-206, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-206ENST00000537392 C14orf37Q86TY3 774 aa12.63□□□□□ -0.39
PMFBP1-206ENST00000537392 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
PMFBP1-206ENST00000537392 STRCP1A6NGW2 1772 aa12.62□□□□□ -0.39
PMFBP1-206ENST00000537392 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
PMFBP1-206ENST00000537392 NGDNQ8NEJ9 315 aaKnown RBP12.62□□□□□ -0.39
PMFBP1-206ENST00000537392 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
PMFBP1-206ENST00000537392 COG3Q96JB2 828 aa12.61□□□□□ -0.39
PMFBP1-206ENST00000537392 CFAP53Q96M91 514 aa12.61□□□□□ -0.39
PMFBP1-206ENST00000537392 SHPRHQ149N8 1683 aa12.6□□□□□ -0.39
PMFBP1-206ENST00000537392 TMEM94Q12767 1356 aa12.6□□□□□ -0.39
PMFBP1-206ENST00000537392 PHF8Q9UPP1 1060 aa12.6□□□□□ -0.39
PMFBP1-206ENST00000537392 NCOA3Q9Y6Q9 1424 aa12.59□□□□□ -0.39
PMFBP1-206ENST00000537392 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
PMFBP1-206ENST00000537392 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
PMFBP1-206ENST00000537392 C19orf44Q9H6X5 657 aa12.59□□□□□ -0.39
PMFBP1-206ENST00000537392 OVOS2A0A0J9YW53 1432 aa12.59□□□□□ -0.39
PMFBP1-206ENST00000537392 OVOS2Q6IE36 1432 aa12.59□□□□□ -0.39
PMFBP1-206ENST00000537392 AATKQ6ZMQ8 1374 aa12.58□□□□□ -0.4
PMFBP1-206ENST00000537392 FBLN1P23142 703 aa12.58□□□□□ -0.4
PMFBP1-206ENST00000537392 POLKQ9UBT6 870 aa12.58□□□□□ -0.4
PMFBP1-206ENST00000537392 GTF3C3Q9Y5Q9 886 aa12.58□□□□□ -0.4
PMFBP1-206ENST00000537392 PNPLA6Q8IY17 1366 aa12.58□□□□□ -0.4
PMFBP1-206ENST00000537392 ESCO1Q5FWF5 840 aa12.57□□□□□ -0.4
PMFBP1-206ENST00000537392 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
PMFBP1-206ENST00000537392 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
PMFBP1-206ENST00000537392 DCCP43146 1447 aa12.56□□□□□ -0.4
PMFBP1-206ENST00000537392 SALL2Q9Y467 1007 aaPredicted RBP12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 C1orf167Q5SNV9 1468 aa12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 MYT1Q01538 1121 aa12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 ORAI2Q96SN7 254 aa12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 ZNF335Q9H4Z2 1342 aaPredicted RBP12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
PMFBP1-206ENST00000537392 ATF3P18847 181 aa12.54□□□□□ -0.4
PMFBP1-206ENST00000537392 MST1RQ04912 1400 aa12.53□□□□□ -0.4
PMFBP1-206ENST00000537392 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
PMFBP1-206ENST00000537392 DIAPH1O60610 1272 aaKnown RBP12.53□□□□□ -0.4
PMFBP1-206ENST00000537392 RRS1Q15050 365 aaKnown RBP12.53□□□□□ -0.4
PMFBP1-206ENST00000537392 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
PMFBP1-206ENST00000537392 LRRC7Q96NW7 1537 aa12.53□□□□□ -0.4
PMFBP1-206ENST00000537392 U2AF1L5P0DN76 240 aaPredicted RBP12.52□□□□□ -0.4
PMFBP1-206ENST00000537392 U2AF1Q01081 240 aaKnown RBP eCLIP12.52□□□□□ -0.4
PMFBP1-206ENST00000537392 NUDCQ9Y266 331 aa12.52□□□□□ -0.4
PMFBP1-206ENST00000537392 MAP2P11137 1827 aaKnown RBP12.52□□□□□ -0.41
PMFBP1-206ENST00000537392 MSH6P52701 1360 aa12.52□□□□□ -0.41
PMFBP1-206ENST00000537392 APAF1O14727 1248 aa12.52□□□□□ -0.41
PMFBP1-206ENST00000537392 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
PMFBP1-206ENST00000537392 PSME1Q06323 249 aa12.52□□□□□ -0.41
PMFBP1-206ENST00000537392 NLRP6P59044 892 aa12.51□□□□□ -0.41
PMFBP1-206ENST00000537392 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
PMFBP1-206ENST00000537392 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
PMFBP1-206ENST00000537392 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
PMFBP1-206ENST00000537392 DMRT2Q9Y5R5 561 aa12.51□□□□□ -0.41
PMFBP1-206ENST00000537392 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
PMFBP1-206ENST00000537392 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
PMFBP1-206ENST00000537392 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 FOXO3O43524 673 aa12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 ABTB2Q8N961 1025 aa12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 KIF1AQ12756 1690 aa12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 ZNF521Q96K83 1311 aa12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 NUTM2GQ5VZR2 741 aa12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 IQSEC2Q5JU85 1478 aa12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 MARF1Q9Y4F3 1742 aaKnown RBP12.5□□□□□ -0.41
PMFBP1-206ENST00000537392 IL13P35225 146 aa12.49□□□□□ -0.41
PMFBP1-206ENST00000537392 SOX12O15370 315 aa12.49□□□□□ -0.41
PMFBP1-206ENST00000537392 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
PMFBP1-206ENST00000537392 NGEFQ8N5V2 710 aa12.48□□□□□ -0.41
PMFBP1-206ENST00000537392 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
PMFBP1-206ENST00000537392 PEAK1Q9H792 1746 aa12.48□□□□□ -0.41
PMFBP1-206ENST00000537392 MAP3K19Q56UN5 1328 aa12.47□□□□□ -0.41
PMFBP1-206ENST00000537392 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
PMFBP1-206ENST00000537392 PLEKHF1Q96S99 279 aa12.47□□□□□ -0.41
PMFBP1-206ENST00000537392 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
PMFBP1-206ENST00000537392 SUPT16HQ9Y5B9 1047 aaKnown RBP12.47□□□□□ -0.41
PMFBP1-206ENST00000537392 TRPM3Q9HCF6 1732 aaPredicted RBP12.46□□□□□ -0.41
PMFBP1-206ENST00000537392 SBNO1A3KN83 1393 aa12.45□□□□□ -0.42
PMFBP1-206ENST00000537392 FCHSD2O94868 740 aa12.45□□□□□ -0.42
PMFBP1-206ENST00000537392 EIF4A2Q14240 407 aaKnown RBP12.45□□□□□ -0.42
PMFBP1-206ENST00000537392 HSP90AB2PQ58FF8 381 aa12.45□□□□□ -0.42
PMFBP1-206ENST00000537392 RSPH6AQ9H0K4 717 aa12.45□□□□□ -0.42
PMFBP1-206ENST00000537392 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
PMFBP1-206ENST00000537392 FLT4P35916 1363 aa12.45□□□□□ -0.42
PMFBP1-206ENST00000537392 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
PMFBP1-206ENST00000537392 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
PMFBP1-206ENST00000537392 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
PMFBP1-206ENST00000537392 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
PMFBP1-206ENST00000537392 PHF23Q9BUL5 403 aaPredicted RBP12.44□□□□□ -0.42
PMFBP1-206ENST00000537392 NFAT5O94916 1531 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 KIF24Q5T7B8 1368 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 HMOX1P09601 288 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 AMPHP49418 695 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 NPHP3Q7Z494 1330 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 MAPK8IP3Q9UPT6 1336 aa12.43□□□□□ -0.42
PMFBP1-206ENST00000537392 PRKAR2BP31323 418 aa12.42□□□□□ -0.42
PMFBP1-206ENST00000537392 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
PMFBP1-206ENST00000537392 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms