RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 PRDM11Q9NQV5 511 aa11.98□□□□□ -0.49
DDB1-208ENST00000537120 ADGRB2O60241 1585 aa11.97□□□□□ -0.49
DDB1-208ENST00000537120 EVA1CP58658 441 aa11.97□□□□□ -0.49
DDB1-208ENST00000537120 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
DDB1-208ENST00000537120 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
DDB1-208ENST00000537120 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
DDB1-208ENST00000537120 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
DDB1-208ENST00000537120 ZC3H6P61129 1189 aaKnown RBP11.96□□□□□ -0.49
DDB1-208ENST00000537120 SLIT2O94813 1529 aa11.96□□□□□ -0.5
DDB1-208ENST00000537120 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
DDB1-208ENST00000537120 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
DDB1-208ENST00000537120 ARHGEF28Q8N1W1 1705 aaKnown RBP11.94□□□□□ -0.5
DDB1-208ENST00000537120 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 EVC2Q86UK5 1308 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 CHRNA2Q15822 529 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 FAM98CQ17RN3 349 aaKnown RBP11.94□□□□□ -0.5
DDB1-208ENST00000537120 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 STRN4Q9NRL3 753 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 CABP1Q9NZU7 370 aa11.94□□□□□ -0.5
DDB1-208ENST00000537120 ROCK2O75116 1388 aaKnown RBP11.93□□□□□ -0.5
DDB1-208ENST00000537120 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
DDB1-208ENST00000537120 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
DDB1-208ENST00000537120 ITSN1Q15811 1721 aa11.92□□□□□ -0.5
DDB1-208ENST00000537120 KCNA4P22459 653 aa11.92□□□□□ -0.5
DDB1-208ENST00000537120 ATP7BP35670 1465 aa11.91□□□□□ -0.5
DDB1-208ENST00000537120 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
DDB1-208ENST00000537120 NLRP6P59044 892 aa11.91□□□□□ -0.5
DDB1-208ENST00000537120 USP35Q9P2H5 1018 aa11.91□□□□□ -0.5
DDB1-208ENST00000537120 PPIP5K1Q6PFW1 1433 aa11.91□□□□□ -0.5
DDB1-208ENST00000537120 KIAA0232Q92628 1395 aa11.91□□□□□ -0.5
DDB1-208ENST00000537120 CARD11Q9BXL7 1154 aa11.9□□□□□ -0.5
DDB1-208ENST00000537120 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.5
DDB1-208ENST00000537120 TRPM3Q9HCF6 1732 aaPredicted RBP11.9□□□□□ -0.5
DDB1-208ENST00000537120 POLR3AO14802 1390 aaPredicted RBP11.9□□□□□ -0.5
DDB1-208ENST00000537120 TONSLQ96HA7 1378 aa11.9□□□□□ -0.5
DDB1-208ENST00000537120 GLI3P10071 1580 aa11.89□□□□□ -0.51
DDB1-208ENST00000537120 ZNF692Q9BU19 519 aaPredicted RBP11.89□□□□□ -0.51
DDB1-208ENST00000537120 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
DDB1-208ENST00000537120 SPATA31A5Q5VU36 1347 aa11.88□□□□□ -0.51
DDB1-208ENST00000537120 SPATA31A7Q8IWB4 1347 aa11.88□□□□□ -0.51
DDB1-208ENST00000537120 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
DDB1-208ENST00000537120 ALS2Q96Q42 1657 aa11.88□□□□□ -0.51
DDB1-208ENST00000537120 COL14A1Q05707 1796 aaKnown RBP11.88□□□□□ -0.51
DDB1-208ENST00000537120 GCP02774 474 aa11.88□□□□□ -0.51
DDB1-208ENST00000537120 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
DDB1-208ENST00000537120 BLMP54132 1417 aaPredicted RBP11.86□□□□□ -0.51
DDB1-208ENST00000537120 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
DDB1-208ENST00000537120 BAG6P46379 1132 aa11.86□□□□□ -0.51
DDB1-208ENST00000537120 PDE3BQ13370 1112 aa11.86□□□□□ -0.51
DDB1-208ENST00000537120 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
DDB1-208ENST00000537120 DEFB132Q7Z7B7 95 aa11.86□□□□□ -0.51
DDB1-208ENST00000537120 BRD4O60885 1362 aaPredicted RBP11.86□□□□□ -0.51
DDB1-208ENST00000537120 QRICH2Q9H0J4 1663 aa11.85□□□□□ -0.51
DDB1-208ENST00000537120 SOX12O15370 315 aa11.85□□□□□ -0.51
DDB1-208ENST00000537120 BRWD3Q6RI45 1802 aa11.85□□□□□ -0.51
DDB1-208ENST00000537120 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
DDB1-208ENST00000537120 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
DDB1-208ENST00000537120 LARP1Q6PKG0 1096 aaKnown RBP11.84□□□□□ -0.51
DDB1-208ENST00000537120 TRPM1Q7Z4N2 1603 aa11.83□□□□□ -0.52
DDB1-208ENST00000537120 TCP11L2Q8N4U5 519 aa11.83□□□□□ -0.52
DDB1-208ENST00000537120 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
DDB1-208ENST00000537120 TTC21BQ7Z4L5 1316 aa11.83□□□□□ -0.52
DDB1-208ENST00000537120 FAM196AQ6ZSG2 479 aa11.82□□□□□ -0.52
DDB1-208ENST00000537120 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
DDB1-208ENST00000537120 HDGFL2Q7Z4V5 671 aaPredicted RBP11.82□□□□□ -0.52
DDB1-208ENST00000537120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.82□□□□□ -0.52
DDB1-208ENST00000537120 USP6P35125 1406 aa11.82□□□□□ -0.52
DDB1-208ENST00000537120 USP19O94966 1318 aa11.82□□□□□ -0.52
DDB1-208ENST00000537120 TOPAZ1Q8N9V7 1692 aa11.81□□□□□ -0.52
DDB1-208ENST00000537120 KTN1Q86UP2 1357 aaKnown RBP11.81□□□□□ -0.52
DDB1-208ENST00000537120 CSB-PGBD3P0DP91 1061 aa11.81□□□□□ -0.52
DDB1-208ENST00000537120 CPDO75976 1380 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 TRIM37O94972 964 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
DDB1-208ENST00000537120 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 PCGF6Q9BYE7 350 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 TERF2IPQ9NYB0 399 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 THRAP3Q9Y2W1 955 aaKnown RBP11.8□□□□□ -0.52
DDB1-208ENST00000537120 TTC21AQ8NDW8 1320 aa11.8□□□□□ -0.52
DDB1-208ENST00000537120 PHRF1Q9P1Y6 1649 aaKnown RBP11.79□□□□□ -0.52
DDB1-208ENST00000537120 SSH2Q76I76 1423 aa11.79□□□□□ -0.52
DDB1-208ENST00000537120 APBA3O96018 575 aa11.79□□□□□ -0.52
DDB1-208ENST00000537120 SLC12A5Q9H2X9 1139 aa11.79□□□□□ -0.52
DDB1-208ENST00000537120 CAMTA1Q9Y6Y1 1673 aa11.78□□□□□ -0.52
DDB1-208ENST00000537120 CRYBG1Q9Y4K1 1723 aa11.77□□□□□ -0.52
DDB1-208ENST00000537120 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.53
DDB1-208ENST00000537120 AATKQ6ZMQ8 1374 aa11.77□□□□□ -0.53
DDB1-208ENST00000537120 EP400Q96L91 3159 aa11.76□□□□□ -0.53
DDB1-208ENST00000537120 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
DDB1-208ENST00000537120 DDB1Q16531 1140 aa11.76□□□□□ -0.53
DDB1-208ENST00000537120 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
DDB1-208ENST00000537120 AXIN2Q9Y2T1 843 aa11.76□□□□□ -0.53
DDB1-208ENST00000537120 NRKQ7Z2Y5 1582 aa11.75□□□□□ -0.53
DDB1-208ENST00000537120 C11orf95C9JLR9 678 aaPredicted RBP11.75□□□□□ -0.53
DDB1-208ENST00000537120 EZH2Q15910 746 aaKnown RBP11.75□□□□□ -0.53
DDB1-208ENST00000537120 NME9Q86XW9 330 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 428 ms