RNA–Protein interactions for RNA: ENST00000536880.5

LDHC-204, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-204ENST00000536880 ARHGAP33O14559 1287 aa11.4□□□□□ -0.58
LDHC-204ENST00000536880 PTPREP23469 700 aa11.4□□□□□ -0.58
LDHC-204ENST00000536880 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
LDHC-204ENST00000536880 MIA2Q96PC5 1412 aa11.4□□□□□ -0.58
LDHC-204ENST00000536880 WASHC2CQ9Y4E1 1318 aa11.39□□□□□ -0.59
LDHC-204ENST00000536880 TESPA1A2RU30 521 aaPredicted RBP11.39□□□□□ -0.59
LDHC-204ENST00000536880 SYNMO15061 1565 aa11.39□□□□□ -0.59
LDHC-204ENST00000536880 NPHP4O75161 1426 aaPredicted RBP11.39□□□□□ -0.59
LDHC-204ENST00000536880 CEP152O94986 1710 aa11.39□□□□□ -0.59
LDHC-204ENST00000536880 ANKLE2Q86XL3 938 aa11.39□□□□□ -0.59
LDHC-204ENST00000536880 TULP1O00294 542 aaPredicted RBP11.38□□□□□ -0.59
LDHC-204ENST00000536880 OSBPP22059 807 aa11.38□□□□□ -0.59
LDHC-204ENST00000536880 PSEN2P49810 448 aa11.38□□□□□ -0.59
LDHC-204ENST00000536880 EN1Q05925 392 aaPredicted RBP11.38□□□□□ -0.59
LDHC-204ENST00000536880 THEMISQ8N1K5 641 aaPredicted RBP11.38□□□□□ -0.59
LDHC-204ENST00000536880 PCDH10Q9P2E7 1040 aa11.38□□□□□ -0.59
LDHC-204ENST00000536880 EIF2AK4Q9P2K8 1649 aaKnown RBP11.38□□□□□ -0.59
LDHC-204ENST00000536880 UBR1Q8IWV7 1749 aa11.38□□□□□ -0.59
LDHC-204ENST00000536880 ABCC3O15438 1527 aa11.37□□□□□ -0.59
LDHC-204ENST00000536880 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
LDHC-204ENST00000536880 MAST1Q9Y2H9 1570 aa11.37□□□□□ -0.59
LDHC-204ENST00000536880 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
LDHC-204ENST00000536880 RSPH4AQ5TD94 716 aa11.36□□□□□ -0.59
LDHC-204ENST00000536880 POTEEQ6S8J3 1075 aa11.36□□□□□ -0.59
LDHC-204ENST00000536880 LRRC7Q96NW7 1537 aa11.35□□□□□ -0.59
LDHC-204ENST00000536880 TSR1Q2NL82 804 aaKnown RBP11.35□□□□□ -0.59
LDHC-204ENST00000536880 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
LDHC-204ENST00000536880 KRTAP3-3Q9BYR6 98 aa11.35□□□□□ -0.59
LDHC-204ENST00000536880 KRTAP3-2Q9BYR7 98 aa11.35□□□□□ -0.59
LDHC-204ENST00000536880 ERVK-7P63135 1459 aa11.34□□□□□ -0.59
LDHC-204ENST00000536880 PRIM1P49642 420 aaKnown RBP11.34□□□□□ -0.59
LDHC-204ENST00000536880 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
LDHC-204ENST00000536880 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.6
LDHC-204ENST00000536880 TSPY4P0CV99 314 aa11.32□□□□□ -0.6
LDHC-204ENST00000536880 TSPY10P0CW01 314 aa11.32□□□□□ -0.6
LDHC-204ENST00000536880 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
LDHC-204ENST00000536880 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
LDHC-204ENST00000536880 PPP1R3GB7ZBB8 358 aa11.3□□□□□ -0.6
LDHC-204ENST00000536880 LRRC9Q6ZRR7 1453 aa11.3□□□□□ -0.6
LDHC-204ENST00000536880 SCAF11Q99590 1463 aaKnown RBP11.3□□□□□ -0.6
LDHC-204ENST00000536880 CROCC2H7BZ55 1655 aa11.3□□□□□ -0.6
LDHC-204ENST00000536880 COL9A1P20849 921 aa11.29□□□□□ -0.6
LDHC-204ENST00000536880 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
LDHC-204ENST00000536880 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
LDHC-204ENST00000536880 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
LDHC-204ENST00000536880 SLIT1O75093 1534 aa11.29□□□□□ -0.6
LDHC-204ENST00000536880 PRDM15P57071 1507 aaPredicted RBP11.29□□□□□ -0.6
LDHC-204ENST00000536880 PIK3C2BO00750 1634 aa11.28□□□□□ -0.6
LDHC-204ENST00000536880 BCANQ96GW7 911 aa11.28□□□□□ -0.6
LDHC-204ENST00000536880 DUOX2Q9NRD8 1548 aa11.28□□□□□ -0.6
LDHC-204ENST00000536880 KDM5AP29375 1690 aaKnown RBP11.26□□□□□ -0.61
LDHC-204ENST00000536880 LTKP29376 864 aa11.25□□□□□ -0.61
LDHC-204ENST00000536880 ADGRD1Q6QNK2 874 aa11.25□□□□□ -0.61
LDHC-204ENST00000536880 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
LDHC-204ENST00000536880 ARHGAP31Q2M1Z3 1444 aa11.25□□□□□ -0.61
LDHC-204ENST00000536880 MYOM3Q5VTT5 1437 aa11.25□□□□□ -0.61
LDHC-204ENST00000536880 VPS8Q8N3P4 1428 aa11.25□□□□□ -0.61
LDHC-204ENST00000536880 ROBO1Q9Y6N7 1651 aa11.24□□□□□ -0.61
LDHC-204ENST00000536880 TK2O00142 265 aa11.23□□□□□ -0.61
LDHC-204ENST00000536880 PROX2Q3B8N5 592 aa11.23□□□□□ -0.61
LDHC-204ENST00000536880 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
LDHC-204ENST00000536880 RGS17Q9UGC6 210 aaPredicted RBP11.23□□□□□ -0.61
LDHC-204ENST00000536880 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
LDHC-204ENST00000536880 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
LDHC-204ENST00000536880 STAC3Q96MF2 364 aa11.22□□□□□ -0.61
LDHC-204ENST00000536880 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
LDHC-204ENST00000536880 VPS9D1Q9Y2B5 631 aa11.22□□□□□ -0.61
LDHC-204ENST00000536880 PTPN23Q9H3S7 1636 aa11.21□□□□□ -0.61
LDHC-204ENST00000536880 EFCAB6Q5THR3 1501 aa11.21□□□□□ -0.61
LDHC-204ENST00000536880 KIF15Q9NS87 1388 aa11.21□□□□□ -0.61
LDHC-204ENST00000536880 KANK4Q5T7N3 995 aaPredicted RBP11.21□□□□□ -0.61
LDHC-204ENST00000536880 SLC4A5Q9BY07 1137 aa11.21□□□□□ -0.61
LDHC-204ENST00000536880 FAM135BQ49AJ0 1406 aa11.2□□□□□ -0.62
LDHC-204ENST00000536880 TMEM2Q9UHN6 1383 aa11.2□□□□□ -0.62
LDHC-204ENST00000536880 FCHSD2O94868 740 aa11.2□□□□□ -0.62
LDHC-204ENST00000536880 LMOD2Q6P5Q4 547 aa11.2□□□□□ -0.62
LDHC-204ENST00000536880 EID1Q9Y6B2 187 aa11.2□□□□□ -0.62
LDHC-204ENST00000536880 MYO5BQ9ULV0 1848 aa11.2□□□□□ -0.62
LDHC-204ENST00000536880 TET3O43151 1660 aa11.2□□□□□ -0.62
LDHC-204ENST00000536880 ABCC5O15440 1437 aa11.19□□□□□ -0.62
LDHC-204ENST00000536880 PRSS12P56730 875 aa11.19□□□□□ -0.62
LDHC-204ENST00000536880 PTGDRQ13258 359 aa11.19□□□□□ -0.62
LDHC-204ENST00000536880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
LDHC-204ENST00000536880 CDCA7LQ96GN5 454 aa11.19□□□□□ -0.62
LDHC-204ENST00000536880 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
LDHC-204ENST00000536880 LMTK2Q8IWU2 1503 aa11.19□□□□□ -0.62
LDHC-204ENST00000536880 SETD1AO15047 1707 aaKnown RBP11.18□□□□□ -0.62
LDHC-204ENST00000536880 TMEM94Q12767 1356 aa11.18□□□□□ -0.62
LDHC-204ENST00000536880 TRIM6-TRIM34B2RNG4 842 aa11.18□□□□□ -0.62
LDHC-204ENST00000536880 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
LDHC-204ENST00000536880 ADGRB3O60242 1522 aa11.18□□□□□ -0.62
LDHC-204ENST00000536880 PHLPP1O60346 1717 aa11.18□□□□□ -0.62
LDHC-204ENST00000536880 CHD2O14647 1828 aaKnown RBP11.17□□□□□ -0.62
LDHC-204ENST00000536880 RRP7BPQ9NSQ0 103 aa11.17□□□□□ -0.62
LDHC-204ENST00000536880 KIAA1468Q9P260 1216 aa11.17□□□□□ -0.62
LDHC-204ENST00000536880 DAPK1P53355 1430 aa11.17□□□□□ -0.62
LDHC-204ENST00000536880 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
LDHC-204ENST00000536880 PACS2Q86VP3 889 aa11.16□□□□□ -0.62
LDHC-204ENST00000536880 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
LDHC-204ENST00000536880 NBPF3Q9H094 633 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms