RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 POLR3AO14802 1390 aaPredicted RBP21.46■■□□□ 1.03
UBC-204ENST00000536661 NBPF8Q3BBV2 869 aa21.45■■□□□ 1.02
UBC-204ENST00000536661 CCDC61Q9Y6R9 512 aa21.45■■□□□ 1.02
UBC-204ENST00000536661 COL14A1Q05707 1796 aaKnown RBP21.43■■□□□ 1.02
UBC-204ENST00000536661 ACEP12821 1306 aa21.43■■□□□ 1.02
UBC-204ENST00000536661 PAK3O75914 559 aaPredicted RBP21.42■■□□□ 1.02
UBC-204ENST00000536661 SRPK2P78362 688 aaKnown RBP21.42■■□□□ 1.02
UBC-204ENST00000536661 PPIP5K1Q6PFW1 1433 aa21.42■■□□□ 1.02
UBC-204ENST00000536661 UNC5CLQ8IV45 518 aa21.42■■□□□ 1.02
UBC-204ENST00000536661 TONSLQ96HA7 1378 aa21.42■■□□□ 1.02
UBC-204ENST00000536661 GJD4Q96KN9 370 aaPredicted RBP21.42■■□□□ 1.02
UBC-204ENST00000536661 RALGAPBQ86X10 1494 aa21.41■■□□□ 1.02
UBC-204ENST00000536661 PLEKHG3A1L390 1219 aa21.41■■□□□ 1.02
UBC-204ENST00000536661 CABP2Q9NPB3 220 aa21.41■■□□□ 1.02
UBC-204ENST00000536661 BRWD3Q6RI45 1802 aa21.39■■□□□ 1.02
UBC-204ENST00000536661 EP400Q96L91 3159 aa21.38■■□□□ 1.01
UBC-204ENST00000536661 FAM83GA6ND36 823 aa21.37■■□□□ 1.01
UBC-204ENST00000536661 NRKQ7Z2Y5 1582 aa21.36■■□□□ 1.01
UBC-204ENST00000536661 AKAP12Q02952 1782 aa21.36■■□□□ 1.01
UBC-204ENST00000536661 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
UBC-204ENST00000536661 EVC2Q86UK5 1308 aa21.35■■□□□ 1.01
UBC-204ENST00000536661 VPS72Q15906 364 aa21.34■■□□□ 1.01
UBC-204ENST00000536661 NUTM2GQ5VZR2 741 aa21.33■■□□□ 1.01
UBC-204ENST00000536661 USP6P35125 1406 aa21.32■■□□□ 1
UBC-204ENST00000536661 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
UBC-204ENST00000536661 BTG4Q9NY30 223 aa21.31■■□□□ 1
UBC-204ENST00000536661 CABP1Q9NZU7 370 aa21.31■■□□□ 1
UBC-204ENST00000536661 SBNO2Q9Y2G9 1366 aa21.31■■□□□ 1
UBC-204ENST00000536661 PIK3C2AO00443 1686 aa21.31■■□□□ 1
UBC-204ENST00000536661 PRDM11Q9NQV5 511 aa21.3■■□□□ 1
UBC-204ENST00000536661 CCDC9Q9Y3X0 531 aaKnown RBP21.3■■□□□ 1
UBC-204ENST00000536661 KIAA0232Q92628 1395 aa21.3■■□□□ 1
UBC-204ENST00000536661 ABTB2Q8N961 1025 aa21.29■■□□□ 1
UBC-204ENST00000536661 USP19O94966 1318 aa21.29■■□□□ 1
UBC-204ENST00000536661 BRD4O60885 1362 aaPredicted RBP21.28■■□□□ 1
UBC-204ENST00000536661 MON2Q7Z3U7 1717 aa21.28■■□□□ 1
UBC-204ENST00000536661 LMO7Q8WWI1 1683 aa21.28■■□□□ 1
UBC-204ENST00000536661 ONECUT3O60422 494 aaPredicted RBP21.27■■□□□ 1
UBC-204ENST00000536661 SSH2Q76I76 1423 aa21.27■■□□□ 1
UBC-204ENST00000536661 SEPT12Q8IYM1 358 aa21.26■□□□□ 0.99
UBC-204ENST00000536661 ZC3H6P61129 1189 aaKnown RBP21.25■□□□□ 0.99
UBC-204ENST00000536661 CHRNA2Q15822 529 aa21.25■□□□□ 0.99
UBC-204ENST00000536661 SLIT3O75094 1523 aa21.24■□□□□ 0.99
UBC-204ENST00000536661 THSD7AQ9UPZ6 1657 aa21.24■□□□□ 0.99
UBC-204ENST00000536661 NLRP13Q86W25 1043 aa21.23■□□□□ 0.99
UBC-204ENST00000536661 CPDO75976 1380 aa21.23■□□□□ 0.99
UBC-204ENST00000536661 CAMTA1Q9Y6Y1 1673 aa21.21■□□□□ 0.99
UBC-204ENST00000536661 CPSF1Q10570 1443 aaKnown RBP21.21■□□□□ 0.99
UBC-204ENST00000536661 SPATA31A5Q5VU36 1347 aa21.21■□□□□ 0.99
UBC-204ENST00000536661 SPATA31A7Q8IWB4 1347 aa21.21■□□□□ 0.99
UBC-204ENST00000536661 FAM98CQ17RN3 349 aaKnown RBP21.2■□□□□ 0.98
UBC-204ENST00000536661 CCDC125Q86Z20 511 aa21.19■□□□□ 0.98
UBC-204ENST00000536661 CD163L1Q9NR16 1453 aa21.19■□□□□ 0.98
UBC-204ENST00000536661 A0A0G2JS52 829 aa21.18■□□□□ 0.98
UBC-204ENST00000536661 GCP02774 474 aa21.18■□□□□ 0.98
UBC-204ENST00000536661 NLRP6P59044 892 aa21.18■□□□□ 0.98
UBC-204ENST00000536661 MYT1Q01538 1121 aa21.18■□□□□ 0.98
UBC-204ENST00000536661 STRN4Q9NRL3 753 aa21.18■□□□□ 0.98
UBC-204ENST00000536661 TTC21BQ7Z4L5 1316 aa21.18■□□□□ 0.98
UBC-204ENST00000536661 COL18A1P39060 1754 aa21.18■□□□□ 0.98
UBC-204ENST00000536661 KRT27Q7Z3Y8 459 aa21.17■□□□□ 0.98
UBC-204ENST00000536661 ZNF692Q9BU19 519 aaPredicted RBP21.17■□□□□ 0.98
UBC-204ENST00000536661 KTN1Q86UP2 1357 aaKnown RBP21.17■□□□□ 0.98
UBC-204ENST00000536661 USP54Q70EL1 1684 aa21.17■□□□□ 0.98
UBC-204ENST00000536661 BLMP54132 1417 aaPredicted RBP21.16■□□□□ 0.98
UBC-204ENST00000536661 SPATA31A1Q5TZJ5 1347 aa21.16■□□□□ 0.98
UBC-204ENST00000536661 RGPD5Q99666 1765 aa21.15■□□□□ 0.98
UBC-204ENST00000536661 SRCAPQ6ZRS2 3230 aa21.15■□□□□ 0.98
UBC-204ENST00000536661 PCGF6Q9BYE7 350 aa21.15■□□□□ 0.98
UBC-204ENST00000536661 COL5A2P05997 1499 aaPredicted RBP21.14■□□□□ 0.98
UBC-204ENST00000536661 TTC21AQ8NDW8 1320 aa21.14■□□□□ 0.97
UBC-204ENST00000536661 TESK2Q96S53 571 aa21.14■□□□□ 0.97
UBC-204ENST00000536661 ST20-MTHFSA0A0A6YYL1 179 aa21.13■□□□□ 0.97
UBC-204ENST00000536661 NFAT5O94916 1531 aa21.12■□□□□ 0.97
UBC-204ENST00000536661 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
UBC-204ENST00000536661 ZBTB7CA1YPR0 619 aa21.11■□□□□ 0.97
UBC-204ENST00000536661 EVA1CP58658 441 aa21.11■□□□□ 0.97
UBC-204ENST00000536661 LARP1Q6PKG0 1096 aaKnown RBP21.11■□□□□ 0.97
UBC-204ENST00000536661 DEFB132Q7Z7B7 95 aa21.11■□□□□ 0.97
UBC-204ENST00000536661 TMC1Q8TDI8 760 aa21.11■□□□□ 0.97
UBC-204ENST00000536661 WNK3Q9BYP7 1800 aa21.11■□□□□ 0.97
UBC-204ENST00000536661 AATKQ6ZMQ8 1374 aa21.1■□□□□ 0.97
UBC-204ENST00000536661 USP47Q96K76 1375 aa21.1■□□□□ 0.97
UBC-204ENST00000536661 RGPD1P0DJD0 1748 aa21.1■□□□□ 0.97
UBC-204ENST00000536661 SLC12A5Q9H2X9 1139 aa21.1■□□□□ 0.97
UBC-204ENST00000536661 PUS7Q96PZ0 661 aaKnown RBP21.09■□□□□ 0.97
UBC-204ENST00000536661 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
UBC-204ENST00000536661 LTN1O94822 1766 aa21.09■□□□□ 0.97
UBC-204ENST00000536661 PARP4Q9UKK3 1724 aaKnown RBP21.09■□□□□ 0.97
UBC-204ENST00000536661 A0A1W2PP64 1363 aa21.09■□□□□ 0.97
UBC-204ENST00000536661 FAM182BQ5T319 152 aa21.08■□□□□ 0.97
UBC-204ENST00000536661 TNS1Q9HBL0 1735 aaKnown RBP21.08■□□□□ 0.97
UBC-204ENST00000536661 EDC4Q6P2E9 1401 aaKnown RBP21.07■□□□□ 0.96
UBC-204ENST00000536661 HDGFL2Q7Z4V5 671 aaPredicted RBP21.07■□□□□ 0.96
UBC-204ENST00000536661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
UBC-204ENST00000536661 ZRANB1Q9UGI0 708 aa21.07■□□□□ 0.96
UBC-204ENST00000536661 USP31Q70CQ4 1352 aa21.07■□□□□ 0.96
UBC-204ENST00000536661 SOX12O15370 315 aa21.06■□□□□ 0.96
UBC-204ENST00000536661 BARGINQ6ZT62 677 aa21.06■□□□□ 0.96
UBC-204ENST00000536661 KCNH5Q8NCM2 988 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms