RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 BAP1Q92560 729 aa11.59□□□□□ -0.55
CLIP1-207ENST00000536634 GDF9O60383 454 aa11.58□□□□□ -0.56
CLIP1-207ENST00000536634 FOXC1Q12948 553 aa11.58□□□□□ -0.56
CLIP1-207ENST00000536634 NR6A1Q15406 480 aa11.58□□□□□ -0.56
CLIP1-207ENST00000536634 TNFRSF10AO00220 468 aa11.57□□□□□ -0.56
CLIP1-207ENST00000536634 SH3BP2P78314 561 aa11.57□□□□□ -0.56
CLIP1-207ENST00000536634 EPS8L1Q8TE68 723 aa11.57□□□□□ -0.56
CLIP1-207ENST00000536634 PDZRN3Q9UPQ7 1066 aa11.56□□□□□ -0.56
CLIP1-207ENST00000536634 WNT7BP56706 349 aa11.55□□□□□ -0.56
CLIP1-207ENST00000536634 ZNF511Q8NB15 262 aa11.55□□□□□ -0.56
CLIP1-207ENST00000536634 GFRA3O60609 400 aa11.54□□□□□ -0.56
CLIP1-207ENST00000536634 SNRKQ9NRH2 765 aa11.54□□□□□ -0.56
CLIP1-207ENST00000536634 WNT7AO00755 349 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 PRR20EP86478 221 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 PRR20CP86479 221 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 PRR20DP86480 221 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 PRR20BP86481 221 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 PRR20AP86496 221 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 RC3H1Q5TC82 1133 aaKnown RBP11.53□□□□□ -0.56
CLIP1-207ENST00000536634 BANK1Q8NDB2 785 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 TRIM34Q9BYJ4 488 aa11.53□□□□□ -0.56
CLIP1-207ENST00000536634 MTMR14Q8NCE2 650 aa11.52□□□□□ -0.57
CLIP1-207ENST00000536634 MRGPRX2Q96LB1 330 aa11.52□□□□□ -0.57
CLIP1-207ENST00000536634 FOXJ1Q92949 421 aa11.51□□□□□ -0.57
CLIP1-207ENST00000536634 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-207ENST00000536634 ARMC2Q8NEN0 867 aa11.49□□□□□ -0.57
CLIP1-207ENST00000536634 FKBPLQ9UIM3 349 aa11.49□□□□□ -0.57
CLIP1-207ENST00000536634 NRG2O14511 850 aaPredicted RBP11.48□□□□□ -0.57
CLIP1-207ENST00000536634 C4orf48Q5BLP8 95 aa11.48□□□□□ -0.57
CLIP1-207ENST00000536634 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
CLIP1-207ENST00000536634 NBPF14Q5TI25 921 aa11.47□□□□□ -0.57
CLIP1-207ENST00000536634 TOR4AQ9NXH8 423 aa11.47□□□□□ -0.57
CLIP1-207ENST00000536634 SIAH2O43255 324 aa11.45□□□□□ -0.58
CLIP1-207ENST00000536634 SH3BP5LQ7L8J4 393 aa11.45□□□□□ -0.58
CLIP1-207ENST00000536634 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
CLIP1-207ENST00000536634 AGERQ15109 404 aa11.44□□□□□ -0.58
CLIP1-207ENST00000536634 SH3RF1Q7Z6J0 888 aa11.44□□□□□ -0.58
CLIP1-207ENST00000536634 BPHLQ86WA6 291 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-207ENST00000536634 GPKOWQ92917 476 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CLIP1-207ENST00000536634 TLL2Q9Y6L7 1015 aa11.43□□□□□ -0.58
CLIP1-207ENST00000536634 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
CLIP1-207ENST00000536634 SOCS7O14512 581 aa11.42□□□□□ -0.58
CLIP1-207ENST00000536634 GPR37L1O60883 481 aa11.42□□□□□ -0.58
CLIP1-207ENST00000536634 VARSP26640 1264 aaKnown RBP11.42□□□□□ -0.58
CLIP1-207ENST00000536634 MCM6Q14566 821 aa11.42□□□□□ -0.58
CLIP1-207ENST00000536634 PDXDC2PQ6P474 469 aa11.42□□□□□ -0.58
CLIP1-207ENST00000536634 SNIP1Q8TAD8 396 aaKnown RBP11.42□□□□□ -0.58
CLIP1-207ENST00000536634 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
CLIP1-207ENST00000536634 MAGEB6P1A0A0J9YX57 407 aa11.41□□□□□ -0.58
CLIP1-207ENST00000536634 TTC24A2A3L6 582 aaPredicted RBP11.41□□□□□ -0.58
CLIP1-207ENST00000536634 J3QL48 77 aa11.41□□□□□ -0.58
CLIP1-207ENST00000536634 FAM187AA6NFU0 413 aa11.4□□□□□ -0.58
CLIP1-207ENST00000536634 CARD14Q9BXL6 1004 aa11.4□□□□□ -0.58
CLIP1-207ENST00000536634 SMPD1P17405 629 aa11.39□□□□□ -0.59
CLIP1-207ENST00000536634 C1QTNF2Q9BXJ5 285 aa11.39□□□□□ -0.59
CLIP1-207ENST00000536634 ALDH1A1P00352 501 aa11.38□□□□□ -0.59
CLIP1-207ENST00000536634 PNMA1Q8ND90 353 aa11.38□□□□□ -0.59
CLIP1-207ENST00000536634 FAM174AQ8TBP5 190 aa11.38□□□□□ -0.59
CLIP1-207ENST00000536634 ARHGAP9Q9BRR9 750 aa11.38□□□□□ -0.59
CLIP1-207ENST00000536634 NDUFB9Q9Y6M9 179 aa11.38□□□□□ -0.59
CLIP1-207ENST00000536634 ZNF787Q6DD87 383 aa11.37□□□□□ -0.59
CLIP1-207ENST00000536634 TBC1D2BQ9UPU7 963 aa11.37□□□□□ -0.59
CLIP1-207ENST00000536634 PTK2Q05397 1052 aa11.36□□□□□ -0.59
CLIP1-207ENST00000536634 ERFEQ4G0M1 354 aa11.36□□□□□ -0.59
CLIP1-207ENST00000536634 PKDCCQ504Y2 493 aa11.36□□□□□ -0.59
CLIP1-207ENST00000536634 APBB1O00213 710 aa11.35□□□□□ -0.59
CLIP1-207ENST00000536634 DGAT1O75907 488 aa11.35□□□□□ -0.59
CLIP1-207ENST00000536634 GPSM3Q9Y4H4 160 aa11.35□□□□□ -0.59
CLIP1-207ENST00000536634 ADAM32Q8TC27 787 aa11.34□□□□□ -0.59
CLIP1-207ENST00000536634 ARID5BQ14865 1188 aa11.33□□□□□ -0.6
CLIP1-207ENST00000536634 TRMT44Q8IYL2 757 aaKnown RBP11.33□□□□□ -0.6
CLIP1-207ENST00000536634 MPNDQ8N594 471 aa11.33□□□□□ -0.6
CLIP1-207ENST00000536634 ZNF775Q96BV0 537 aaPredicted RBP11.33□□□□□ -0.6
CLIP1-207ENST00000536634 CDK15Q96Q40 435 aa11.33□□□□□ -0.6
CLIP1-207ENST00000536634 FBXO45P0C2W1 286 aa11.32□□□□□ -0.6
CLIP1-207ENST00000536634 ZBTB33Q86T24 672 aa11.32□□□□□ -0.6
CLIP1-207ENST00000536634 HPS1Q92902 700 aa11.32□□□□□ -0.6
CLIP1-207ENST00000536634 GDPD2Q9HCC8 539 aa11.32□□□□□ -0.6
CLIP1-207ENST00000536634 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
CLIP1-207ENST00000536634 ADH1CP00326 375 aa11.3□□□□□ -0.6
CLIP1-207ENST00000536634 MYT1Q01538 1121 aa11.3□□□□□ -0.6
CLIP1-207ENST00000536634 IRF5Q13568 498 aa11.3□□□□□ -0.6
CLIP1-207ENST00000536634 POM121Q96HA1 1249 aa11.3□□□□□ -0.6
CLIP1-207ENST00000536634 WASF2Q9Y6W5 498 aa11.3□□□□□ -0.6
CLIP1-207ENST00000536634 AVPP01185 164 aa11.29□□□□□ -0.6
CLIP1-207ENST00000536634 GRM5P41594 1212 aa11.29□□□□□ -0.6
CLIP1-207ENST00000536634 FLIIQ13045 1269 aa11.29□□□□□ -0.6
CLIP1-207ENST00000536634 NNTQ13423 1086 aa11.28□□□□□ -0.6
CLIP1-207ENST00000536634 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
CLIP1-207ENST00000536634 COG6Q9Y2V7 657 aa11.28□□□□□ -0.6
CLIP1-207ENST00000536634 MAP4K5Q9Y4K4 846 aa11.28□□□□□ -0.6
CLIP1-207ENST00000536634 ST8SIA5O15466 376 aa11.27□□□□□ -0.61
CLIP1-207ENST00000536634 ABL2P42684 1182 aa11.27□□□□□ -0.61
CLIP1-207ENST00000536634 NR1H3Q13133 447 aa11.27□□□□□ -0.61
CLIP1-207ENST00000536634 VASH1Q7L8A9 365 aaPredicted RBP11.27□□□□□ -0.61
CLIP1-207ENST00000536634 NR3C2P08235 984 aa11.26□□□□□ -0.61
CLIP1-207ENST00000536634 FSHRP23945 695 aa11.26□□□□□ -0.61
CLIP1-207ENST00000536634 PRM3Q9NNZ6 103 aa11.26□□□□□ -0.61
CLIP1-207ENST00000536634 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
CLIP1-207ENST00000536634 DZIP3Q86Y13 1208 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms