RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 RBM19Q9Y4C8 960 aaKnown RBP15.76■□□□□ 0.11
CHRNB1-202ENST00000536404 SLIT2O94813 1529 aa15.74■□□□□ 0.11
CHRNB1-202ENST00000536404 ARHGEF10O15013 1369 aa15.74■□□□□ 0.11
CHRNB1-202ENST00000536404 NBPF1Q3BBV0 1214 aa15.73■□□□□ 0.11
CHRNB1-202ENST00000536404 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
CHRNB1-202ENST00000536404 ATAD2Q6PL18 1390 aa15.73■□□□□ 0.11
CHRNB1-202ENST00000536404 EIF3AQ14152 1382 aaKnown RBP15.72■□□□□ 0.11
CHRNB1-202ENST00000536404 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
CHRNB1-202ENST00000536404 FANCIQ9NVI1 1328 aa15.72■□□□□ 0.11
CHRNB1-202ENST00000536404 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
CHRNB1-202ENST00000536404 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
CHRNB1-202ENST00000536404 GPRASP1Q5JY77 1395 aa15.72■□□□□ 0.11
CHRNB1-202ENST00000536404 RALGAPBQ86X10 1494 aa15.71■□□□□ 0.11
CHRNB1-202ENST00000536404 NUDT16Q96DE0 195 aaKnown RBP15.71■□□□□ 0.11
CHRNB1-202ENST00000536404 CDK19Q9BWU1 502 aa15.71■□□□□ 0.11
CHRNB1-202ENST00000536404 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.7■□□□□ 0.1
CHRNB1-202ENST00000536404 TRPM3Q9HCF6 1732 aaPredicted RBP15.7■□□□□ 0.1
CHRNB1-202ENST00000536404 GLI3P10071 1580 aa15.7■□□□□ 0.1
CHRNB1-202ENST00000536404 ABCA3Q99758 1704 aa15.69■□□□□ 0.1
CHRNB1-202ENST00000536404 PAK3O75914 559 aaPredicted RBP15.69■□□□□ 0.1
CHRNB1-202ENST00000536404 EIF4G2P78344 907 aaKnown RBP eCLIP15.68■□□□□ 0.1
CHRNB1-202ENST00000536404 VPS72Q15906 364 aa15.68■□□□□ 0.1
CHRNB1-202ENST00000536404 ATP7BP35670 1465 aa15.67■□□□□ 0.1
CHRNB1-202ENST00000536404 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
CHRNB1-202ENST00000536404 ALS2Q96Q42 1657 aa15.67■□□□□ 0.1
CHRNB1-202ENST00000536404 KIAA1210Q9ULL0 1709 aa15.67■□□□□ 0.1
CHRNB1-202ENST00000536404 EP400Q96L91 3159 aa15.67■□□□□ 0.1
CHRNB1-202ENST00000536404 HNRNPUQ00839 825 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHRNB1-202ENST00000536404 CCDC9Q9Y3X0 531 aaKnown RBP15.67■□□□□ 0.1
CHRNB1-202ENST00000536404 SEPT12Q8IYM1 358 aa15.65■□□□□ 0.1
CHRNB1-202ENST00000536404 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
CHRNB1-202ENST00000536404 BTG4Q9NY30 223 aa15.65■□□□□ 0.1
CHRNB1-202ENST00000536404 NWD2Q9ULI1 1742 aa15.64■□□□□ 0.09
CHRNB1-202ENST00000536404 ONECUT3O60422 494 aaPredicted RBP15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 HSPA5P11021 654 aaKnown RBP15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 NBPF8Q3BBV2 869 aa15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 NUTM2GQ5VZR2 741 aa15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 PPP4R2Q9NY27 417 aa15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 ACEP12821 1306 aa15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 BRWD3Q6RI45 1802 aa15.63■□□□□ 0.09
CHRNB1-202ENST00000536404 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
CHRNB1-202ENST00000536404 PLEKHG3A1L390 1219 aa15.62■□□□□ 0.09
CHRNB1-202ENST00000536404 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
CHRNB1-202ENST00000536404 CCDC125Q86Z20 511 aa15.61■□□□□ 0.09
CHRNB1-202ENST00000536404 CENPJQ9HC77 1338 aaPredicted RBP15.61■□□□□ 0.09
CHRNB1-202ENST00000536404 POLR3AO14802 1390 aaPredicted RBP15.61■□□□□ 0.09
CHRNB1-202ENST00000536404 ANO8Q9HCE9 1232 aaPredicted RBP15.61■□□□□ 0.09
CHRNB1-202ENST00000536404 CABP2Q9NPB3 220 aa15.61■□□□□ 0.09
CHRNB1-202ENST00000536404 CRYBG1Q9Y4K1 1723 aa15.61■□□□□ 0.09
CHRNB1-202ENST00000536404 NRAPQ86VF7 1730 aa15.6■□□□□ 0.09
CHRNB1-202ENST00000536404 WASHC2AQ641Q2 1341 aa15.6■□□□□ 0.09
CHRNB1-202ENST00000536404 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
CHRNB1-202ENST00000536404 FAM98CQ17RN3 349 aaKnown RBP15.6■□□□□ 0.09
CHRNB1-202ENST00000536404 PRDM11Q9NQV5 511 aa15.6■□□□□ 0.09
CHRNB1-202ENST00000536404 COL14A1Q05707 1796 aaKnown RBP15.59■□□□□ 0.09
CHRNB1-202ENST00000536404 TOPAZ1Q8N9V7 1692 aa15.59■□□□□ 0.09
CHRNB1-202ENST00000536404 DEKP35659 375 aaKnown RBP15.59■□□□□ 0.09
CHRNB1-202ENST00000536404 CHRNA2Q15822 529 aa15.59■□□□□ 0.09
CHRNB1-202ENST00000536404 KRT27Q7Z3Y8 459 aa15.59■□□□□ 0.09
CHRNB1-202ENST00000536404 A0A0G2JS52 829 aa15.58■□□□□ 0.09
CHRNB1-202ENST00000536404 ZC3H6P61129 1189 aaKnown RBP15.58■□□□□ 0.09
CHRNB1-202ENST00000536404 KIAA0232Q92628 1395 aa15.58■□□□□ 0.08
CHRNB1-202ENST00000536404 SPATA31A5Q5VU36 1347 aa15.57■□□□□ 0.08
CHRNB1-202ENST00000536404 ZBED9Q6R2W3 1325 aa15.57■□□□□ 0.08
CHRNB1-202ENST00000536404 SPATA31A7Q8IWB4 1347 aa15.57■□□□□ 0.08
CHRNB1-202ENST00000536404 DEFB132Q7Z7B7 95 aa15.57■□□□□ 0.08
CHRNB1-202ENST00000536404 ABTB2Q8N961 1025 aa15.56■□□□□ 0.08
CHRNB1-202ENST00000536404 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
CHRNB1-202ENST00000536404 PPIP5K1Q6PFW1 1433 aa15.56■□□□□ 0.08
CHRNB1-202ENST00000536404 CCDC7Q96M83 1385 aa15.56■□□□□ 0.08
CHRNB1-202ENST00000536404 CABP1Q9NZU7 370 aa15.55■□□□□ 0.08
CHRNB1-202ENST00000536404 QRICH2Q9H0J4 1663 aa15.55■□□□□ 0.08
CHRNB1-202ENST00000536404 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
CHRNB1-202ENST00000536404 EIF5BO60841 1220 aaKnown RBP15.54■□□□□ 0.08
CHRNB1-202ENST00000536404 STRN4Q9NRL3 753 aa15.54■□□□□ 0.08
CHRNB1-202ENST00000536404 ZRANB1Q9UGI0 708 aa15.54■□□□□ 0.08
CHRNB1-202ENST00000536404 TRPM1Q7Z4N2 1603 aa15.53■□□□□ 0.08
CHRNB1-202ENST00000536404 FAM182BQ5T319 152 aa15.53■□□□□ 0.08
CHRNB1-202ENST00000536404 PRKRIP1Q9H875 184 aaPredicted RBP15.53■□□□□ 0.08
CHRNB1-202ENST00000536404 SF3B2Q13435 895 aaKnown RBP15.52■□□□□ 0.08
CHRNB1-202ENST00000536404 ROCK2O75116 1388 aaKnown RBP15.52■□□□□ 0.07
CHRNB1-202ENST00000536404 USP19O94966 1318 aa15.52■□□□□ 0.07
CHRNB1-202ENST00000536404 SPATA31A1Q5TZJ5 1347 aa15.52■□□□□ 0.07
CHRNB1-202ENST00000536404 SRCAPQ6ZRS2 3230 aa15.51■□□□□ 0.07
CHRNB1-202ENST00000536404 EVC2Q86UK5 1308 aa15.51■□□□□ 0.07
CHRNB1-202ENST00000536404 EVA1CP58658 441 aa15.5■□□□□ 0.07
CHRNB1-202ENST00000536404 NLRP13Q86W25 1043 aa15.5■□□□□ 0.07
CHRNB1-202ENST00000536404 GCP02774 474 aa15.5■□□□□ 0.07
CHRNB1-202ENST00000536404 MRS2Q9HD23 443 aa15.5■□□□□ 0.07
CHRNB1-202ENST00000536404 NRKQ7Z2Y5 1582 aa15.49■□□□□ 0.07
CHRNB1-202ENST00000536404 MSH5O43196 834 aa15.49■□□□□ 0.07
CHRNB1-202ENST00000536404 USP35Q9P2H5 1018 aa15.49■□□□□ 0.07
CHRNB1-202ENST00000536404 CPDO75976 1380 aa15.48■□□□□ 0.07
CHRNB1-202ENST00000536404 CAMTA1Q9Y6Y1 1673 aa15.48■□□□□ 0.07
CHRNB1-202ENST00000536404 NLRP6P59044 892 aa15.48■□□□□ 0.07
CHRNB1-202ENST00000536404 LARP1Q6PKG0 1096 aaKnown RBP15.48■□□□□ 0.07
CHRNB1-202ENST00000536404 USP6P35125 1406 aa15.48■□□□□ 0.07
CHRNB1-202ENST00000536404 THSD7AQ9UPZ6 1657 aa15.47■□□□□ 0.07
CHRNB1-202ENST00000536404 DAXXQ9UER7 740 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms