RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 DMRT2Q9Y5R5 561 aa27.8■■■□□ 2.04
TRIM3-214ENST00000536344 PPIP5K1Q6PFW1 1433 aa27.79■■■□□ 2.04
TRIM3-214ENST00000536344 PLIN1O60240 522 aa27.79■■■□□ 2.04
TRIM3-214ENST00000536344 SPINK5Q9NQ38 1064 aaPredicted RBP27.79■■■□□ 2.04
TRIM3-214ENST00000536344 POLR3AO14802 1390 aaPredicted RBP27.79■■■□□ 2.04
TRIM3-214ENST00000536344 PRR36Q9H6K5 1346 aa27.79■■■□□ 2.04
TRIM3-214ENST00000536344 NME9Q86XW9 330 aa27.78■■■□□ 2.04
TRIM3-214ENST00000536344 U2SURPO15042 1029 aaKnown RBP27.77■■■□□ 2.04
TRIM3-214ENST00000536344 U2AF1L5P0DN76 240 aaPredicted RBP27.77■■■□□ 2.04
TRIM3-214ENST00000536344 U2AF1Q01081 240 aaKnown RBP eCLIP27.77■■■□□ 2.04
TRIM3-214ENST00000536344 NINLQ9Y2I6 1382 aa27.77■■■□□ 2.04
TRIM3-214ENST00000536344 PDE3BQ13370 1112 aa27.76■■■□□ 2.04
TRIM3-214ENST00000536344 CFAP53Q96M91 514 aa27.75■■■□□ 2.03
TRIM3-214ENST00000536344 CCDC61Q9Y6R9 512 aa27.74■■■□□ 2.03
TRIM3-214ENST00000536344 USP32Q8NFA0 1604 aa27.73■■■□□ 2.03
TRIM3-214ENST00000536344 MS4A1P11836 297 aa27.72■■■□□ 2.03
TRIM3-214ENST00000536344 GOLGA2Q08379 1002 aa27.72■■■□□ 2.03
TRIM3-214ENST00000536344 PMFBP1Q8TBY8 1022 aa27.71■■■□□ 2.03
TRIM3-214ENST00000536344 NSD2O96028 1365 aa27.71■■■□□ 2.03
TRIM3-214ENST00000536344 TECPR2O15040 1411 aa27.7■■■□□ 2.03
TRIM3-214ENST00000536344 FAM135BQ49AJ0 1406 aa27.7■■■□□ 2.03
TRIM3-214ENST00000536344 SHPRHQ149N8 1683 aa27.7■■■□□ 2.02
TRIM3-214ENST00000536344 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.69■■■□□ 2.02
TRIM3-214ENST00000536344 KCNA6P17658 529 aa27.69■■■□□ 2.02
TRIM3-214ENST00000536344 TCP11L2Q8N4U5 519 aa27.69■■■□□ 2.02
TRIM3-214ENST00000536344 INSRP06213 1382 aa27.69■■■□□ 2.02
TRIM3-214ENST00000536344 SOX12O15370 315 aa27.69■■■□□ 2.02
TRIM3-214ENST00000536344 DUSP27Q5VZP5 1158 aa27.69■■■□□ 2.02
TRIM3-214ENST00000536344 ZNF521Q96K83 1311 aa27.68■■■□□ 2.02
TRIM3-214ENST00000536344 ARHGAP23Q9P227 1491 aa27.68■■■□□ 2.02
TRIM3-214ENST00000536344 SLIT1O75093 1534 aa27.67■■■□□ 2.02
TRIM3-214ENST00000536344 CPS1P31327 1500 aa27.67■■■□□ 2.02
TRIM3-214ENST00000536344 FRAT2O75474 233 aaPredicted RBP27.67■■■□□ 2.02
TRIM3-214ENST00000536344 TBX22Q9Y458 520 aa27.67■■■□□ 2.02
TRIM3-214ENST00000536344 EMILIN1Q9Y6C2 1016 aa27.66■■■□□ 2.02
TRIM3-214ENST00000536344 MED14O60244 1454 aa27.65■■■□□ 2.02
TRIM3-214ENST00000536344 DDRGK1Q96HY6 314 aa27.65■■■□□ 2.02
TRIM3-214ENST00000536344 RRS1Q15050 365 aaKnown RBP27.64■■■□□ 2.02
TRIM3-214ENST00000536344 SIRT1Q96EB6 747 aa27.64■■■□□ 2.02
TRIM3-214ENST00000536344 CEP170BQ9Y4F5 1589 aaPredicted RBP27.64■■■□□ 2.02
TRIM3-214ENST00000536344 KNDC1Q76NI1 1749 aa27.64■■■□□ 2.02
TRIM3-214ENST00000536344 RUNDC1Q96C34 613 aa27.64■■■□□ 2.01
TRIM3-214ENST00000536344 ATP7BP35670 1465 aa27.63■■■□□ 2.01
TRIM3-214ENST00000536344 ACEP12821 1306 aa27.63■■■□□ 2.01
TRIM3-214ENST00000536344 SLFN5Q08AF3 891 aa27.62■■■□□ 2.01
TRIM3-214ENST00000536344 WWC1Q8IX03 1113 aa27.62■■■□□ 2.01
TRIM3-214ENST00000536344 POLKQ9UBT6 870 aa27.61■■■□□ 2.01
TRIM3-214ENST00000536344 CPSF1Q10570 1443 aaKnown RBP27.61■■■□□ 2.01
TRIM3-214ENST00000536344 ANKLE2Q86XL3 938 aa27.6■■■□□ 2.01
TRIM3-214ENST00000536344 C20orf194Q5TEA3 1177 aa27.59■■■□□ 2.01
TRIM3-214ENST00000536344 KIF20BQ96Q89 1820 aa27.59■■■□□ 2.01
TRIM3-214ENST00000536344 RSPH6AQ9H0K4 717 aa27.58■■■□□ 2.01
TRIM3-214ENST00000536344 DIAPH1O60610 1272 aaKnown RBP27.57■■■□□ 2
TRIM3-214ENST00000536344 COG3Q96JB2 828 aa27.57■■■□□ 2
TRIM3-214ENST00000536344 CRBNQ96SW2 442 aa27.57■■■□□ 2
TRIM3-214ENST00000536344 HMOX1P09601 288 aa27.56■■■□□ 2
TRIM3-214ENST00000536344 DAXXQ9UER7 740 aaPredicted RBP27.56■■■□□ 2
TRIM3-214ENST00000536344 EDC4Q6P2E9 1401 aaKnown RBP27.56■■■□□ 2
TRIM3-214ENST00000536344 FAM43AQ8N2R8 423 aa27.54■■■□□ 2
TRIM3-214ENST00000536344 NKTRP30414 1462 aaKnown RBP27.53■■■□□ 2
TRIM3-214ENST00000536344 MAP2P11137 1827 aaKnown RBP27.53■■■□□ 2
TRIM3-214ENST00000536344 ANKRD26Q9UPS8 1709 aa27.53■■■□□ 2
TRIM3-214ENST00000536344 NGDNQ8NEJ9 315 aaKnown RBP27.53■■■□□ 2
TRIM3-214ENST00000536344 PKNOX2Q96KN3 472 aa27.53■■■□□ 2
TRIM3-214ENST00000536344 CDC42BPGQ6DT37 1551 aa27.53■■■□□ 2
TRIM3-214ENST00000536344 NUTM2GQ5VZR2 741 aa27.52■■■□□ 2
TRIM3-214ENST00000536344 ADAMTSL3P82987 1691 aa27.52■■■□□ 2
TRIM3-214ENST00000536344 BCAR3O75815 825 aa27.52■■■□□ 2
TRIM3-214ENST00000536344 RGPD8O14715 1765 aaPredicted RBP27.51■■□□□ 1.99
TRIM3-214ENST00000536344 TTC21BQ7Z4L5 1316 aa27.5■■□□□ 1.99
TRIM3-214ENST00000536344 COL3A1P02461 1466 aaPredicted RBP27.5■■□□□ 1.99
TRIM3-214ENST00000536344 E9PSI1 815 aa27.49■■□□□ 1.99
TRIM3-214ENST00000536344 PLEKHG5O94827 1062 aa27.49■■□□□ 1.99
TRIM3-214ENST00000536344 ZNF692Q9BU19 519 aaPredicted RBP27.49■■□□□ 1.99
TRIM3-214ENST00000536344 TRMT2AQ8IZ69 625 aaKnown RBP27.48■■□□□ 1.99
TRIM3-214ENST00000536344 PLEKHF1Q96S99 279 aa27.47■■□□□ 1.99
TRIM3-214ENST00000536344 MAPK8IP3Q9UPT6 1336 aa27.47■■□□□ 1.99
TRIM3-214ENST00000536344 RRAGDQ9NQL2 400 aaPredicted RBP27.47■■□□□ 1.99
TRIM3-214ENST00000536344 ITSN1Q15811 1721 aa27.46■■□□□ 1.99
TRIM3-214ENST00000536344 SETD1BQ9UPS6 1966 aaKnown RBP27.45■■□□□ 1.99
TRIM3-214ENST00000536344 PLEKHG3A1L390 1219 aa27.45■■□□□ 1.99
TRIM3-214ENST00000536344 PRKAR2BP31323 418 aa27.45■■□□□ 1.99
TRIM3-214ENST00000536344 C14orf37Q86TY3 774 aa27.45■■□□□ 1.99
TRIM3-214ENST00000536344 IQSEC2Q5JU85 1478 aa27.45■■□□□ 1.98
TRIM3-214ENST00000536344 TSR2Q969E8 191 aaKnown RBP27.45■■□□□ 1.98
TRIM3-214ENST00000536344 BCL2L13Q9BXK5 485 aa27.45■■□□□ 1.98
TRIM3-214ENST00000536344 PTCH1Q13635 1447 aa27.44■■□□□ 1.98
TRIM3-214ENST00000536344 TMPOP42166 694 aaKnown RBP27.44■■□□□ 1.98
TRIM3-214ENST00000536344 MON2Q7Z3U7 1717 aa27.43■■□□□ 1.98
TRIM3-214ENST00000536344 DIP2AQ14689 1571 aa27.43■■□□□ 1.98
TRIM3-214ENST00000536344 PHACTR3Q96KR7 559 aa27.43■■□□□ 1.98
TRIM3-214ENST00000536344 PNPLA6Q8IY17 1366 aa27.42■■□□□ 1.98
TRIM3-214ENST00000536344 RIPK4P57078 832 aa27.42■■□□□ 1.98
TRIM3-214ENST00000536344 C8orf34Q49A92 452 aa27.42■■□□□ 1.98
TRIM3-214ENST00000536344 AKAP12Q02952 1782 aa27.42■■□□□ 1.98
TRIM3-214ENST00000536344 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
TRIM3-214ENST00000536344 USP6P35125 1406 aa27.41■■□□□ 1.98
TRIM3-214ENST00000536344 TRIM35Q9UPQ4 493 aa27.39■■□□□ 1.98
TRIM3-214ENST00000536344 XRN1Q8IZH2 1706 aaKnown RBP27.39■■□□□ 1.97
TRIM3-214ENST00000536344 THUMPD2Q9BTF0 503 aaKnown RBP27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms