RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 BRWD3Q6RI45 1802 aa18.07■□□□□ 0.48
DDB1-207ENST00000535967 GJD4Q96KN9 370 aaPredicted RBP18.06■□□□□ 0.48
DDB1-207ENST00000535967 SLIT2O94813 1529 aa18.05■□□□□ 0.48
DDB1-207ENST00000535967 NBPF1Q3BBV0 1214 aa18.05■□□□□ 0.48
DDB1-207ENST00000535967 USP32Q8NFA0 1604 aa18.04■□□□□ 0.48
DDB1-207ENST00000535967 TRAK1Q9UPV9 953 aa18.04■□□□□ 0.48
DDB1-207ENST00000535967 EIF3AQ14152 1382 aaKnown RBP18.04■□□□□ 0.48
DDB1-207ENST00000535967 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
DDB1-207ENST00000535967 ITSN1Q15811 1721 aa18.03■□□□□ 0.48
DDB1-207ENST00000535967 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
DDB1-207ENST00000535967 SPATA31A3Q5VYP0 1347 aa18.03■□□□□ 0.48
DDB1-207ENST00000535967 PRAM1Q96QH2 718 aa18.02■□□□□ 0.48
DDB1-207ENST00000535967 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
DDB1-207ENST00000535967 POGKQ9P215 609 aa18■□□□□ 0.47
DDB1-207ENST00000535967 ABCA3Q99758 1704 aa18■□□□□ 0.47
DDB1-207ENST00000535967 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
DDB1-207ENST00000535967 KRT28Q7Z3Y7 464 aa17.98■□□□□ 0.47
DDB1-207ENST00000535967 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
DDB1-207ENST00000535967 TOPAZ1Q8N9V7 1692 aa17.98■□□□□ 0.47
DDB1-207ENST00000535967 PLEKHG5O94827 1062 aa17.98■□□□□ 0.47
DDB1-207ENST00000535967 CCDC125Q86Z20 511 aa17.98■□□□□ 0.47
DDB1-207ENST00000535967 CARD11Q9BXL7 1154 aa17.98■□□□□ 0.47
DDB1-207ENST00000535967 CENPJQ9HC77 1338 aaPredicted RBP17.97■□□□□ 0.47
DDB1-207ENST00000535967 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
DDB1-207ENST00000535967 DEFB132Q7Z7B7 95 aa17.97■□□□□ 0.47
DDB1-207ENST00000535967 TNS3Q68CZ2 1445 aa17.96■□□□□ 0.47
DDB1-207ENST00000535967 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
DDB1-207ENST00000535967 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
DDB1-207ENST00000535967 ANKARQ7Z5J8 1434 aa17.95■□□□□ 0.46
DDB1-207ENST00000535967 NWD2Q9ULI1 1742 aa17.95■□□□□ 0.46
DDB1-207ENST00000535967 SAFB2Q14151 953 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDB1-207ENST00000535967 PHF8Q9UPP1 1060 aa17.94■□□□□ 0.46
DDB1-207ENST00000535967 SEPT12Q8IYM1 358 aa17.93■□□□□ 0.46
DDB1-207ENST00000535967 MINK1Q8N4C8 1332 aaPredicted RBP17.92■□□□□ 0.46
DDB1-207ENST00000535967 VPS72Q15906 364 aa17.91■□□□□ 0.46
DDB1-207ENST00000535967 USP47Q96K76 1375 aa17.9■□□□□ 0.46
DDB1-207ENST00000535967 HAP1P54257 671 aaPredicted RBP17.9■□□□□ 0.46
DDB1-207ENST00000535967 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
DDB1-207ENST00000535967 ATP7BP35670 1465 aa17.9■□□□□ 0.46
DDB1-207ENST00000535967 SBNO1A3KN83 1393 aa17.9■□□□□ 0.46
DDB1-207ENST00000535967 TRPM3Q9HCF6 1732 aaPredicted RBP17.9■□□□□ 0.46
DDB1-207ENST00000535967 LMOD2Q6P5Q4 547 aa17.89■□□□□ 0.45
DDB1-207ENST00000535967 FAM83GA6ND36 823 aa17.88■□□□□ 0.45
DDB1-207ENST00000535967 WASLO00401 505 aaPredicted RBP17.88■□□□□ 0.45
DDB1-207ENST00000535967 ONECUT3O60422 494 aaPredicted RBP17.88■□□□□ 0.45
DDB1-207ENST00000535967 PMFBP1Q8TBY8 1022 aa17.88■□□□□ 0.45
DDB1-207ENST00000535967 HIRIP3Q9BW71 556 aaPredicted RBP17.88■□□□□ 0.45
DDB1-207ENST00000535967 CCDC9Q9Y3X0 531 aaKnown RBP17.88■□□□□ 0.45
DDB1-207ENST00000535967 PSME1Q06323 249 aa17.87■□□□□ 0.45
DDB1-207ENST00000535967 ALS2Q96Q42 1657 aa17.86■□□□□ 0.45
DDB1-207ENST00000535967 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
DDB1-207ENST00000535967 KRT27Q7Z3Y8 459 aa17.85■□□□□ 0.45
DDB1-207ENST00000535967 LRP5O75197 1615 aa17.85■□□□□ 0.45
DDB1-207ENST00000535967 CRYBG1Q9Y4K1 1723 aa17.84■□□□□ 0.45
DDB1-207ENST00000535967 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
DDB1-207ENST00000535967 EVC2Q86UK5 1308 aa17.84■□□□□ 0.45
DDB1-207ENST00000535967 SLC24A1O60721 1099 aa17.83■□□□□ 0.45
DDB1-207ENST00000535967 PRR36Q9H6K5 1346 aa17.83■□□□□ 0.44
DDB1-207ENST00000535967 SF3B2Q13435 895 aaKnown RBP17.82■□□□□ 0.44
DDB1-207ENST00000535967 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
DDB1-207ENST00000535967 COL14A1Q05707 1796 aaKnown RBP17.82■□□□□ 0.44
DDB1-207ENST00000535967 PSDA5PKW4 1024 aaPredicted RBP17.81■□□□□ 0.44
DDB1-207ENST00000535967 FKBP8Q14318 412 aa17.81■□□□□ 0.44
DDB1-207ENST00000535967 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
DDB1-207ENST00000535967 ST20-MTHFSA0A0A6YYL1 179 aa17.81■□□□□ 0.44
DDB1-207ENST00000535967 A0A0G2JS52 829 aa17.81■□□□□ 0.44
DDB1-207ENST00000535967 MYT1Q01538 1121 aa17.81■□□□□ 0.44
DDB1-207ENST00000535967 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
DDB1-207ENST00000535967 BTG4Q9NY30 223 aa17.81■□□□□ 0.44
DDB1-207ENST00000535967 MON2Q7Z3U7 1717 aa17.79■□□□□ 0.44
DDB1-207ENST00000535967 SRPK2P78362 688 aaKnown RBP17.79■□□□□ 0.44
DDB1-207ENST00000535967 TESK2Q96S53 571 aa17.79■□□□□ 0.44
DDB1-207ENST00000535967 MYOM1P52179 1685 aa17.78■□□□□ 0.44
DDB1-207ENST00000535967 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
DDB1-207ENST00000535967 NUDT16Q96DE0 195 aaKnown RBP17.78■□□□□ 0.44
DDB1-207ENST00000535967 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
DDB1-207ENST00000535967 PPIP5K1Q6PFW1 1433 aa17.77■□□□□ 0.44
DDB1-207ENST00000535967 RGPD1P0DJD0 1748 aa17.77■□□□□ 0.44
DDB1-207ENST00000535967 TNS1Q9HBL0 1735 aaKnown RBP17.77■□□□□ 0.44
DDB1-207ENST00000535967 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
DDB1-207ENST00000535967 NRKQ7Z2Y5 1582 aa17.76■□□□□ 0.43
DDB1-207ENST00000535967 SPATA31A5Q5VU36 1347 aa17.75■□□□□ 0.43
DDB1-207ENST00000535967 SPATA31A7Q8IWB4 1347 aa17.75■□□□□ 0.43
DDB1-207ENST00000535967 BAG6P46379 1132 aa17.75■□□□□ 0.43
DDB1-207ENST00000535967 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
DDB1-207ENST00000535967 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
DDB1-207ENST00000535967 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
DDB1-207ENST00000535967 CABP2Q9NPB3 220 aa17.74■□□□□ 0.43
DDB1-207ENST00000535967 TMF1P82094 1093 aa17.73■□□□□ 0.43
DDB1-207ENST00000535967 NINLQ9Y2I6 1382 aa17.73■□□□□ 0.43
DDB1-207ENST00000535967 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
DDB1-207ENST00000535967 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
DDB1-207ENST00000535967 SPDYE4A6NLX3 237 aa17.72■□□□□ 0.43
DDB1-207ENST00000535967 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
DDB1-207ENST00000535967 ZEB1P37275 1124 aaPredicted RBP17.72■□□□□ 0.43
DDB1-207ENST00000535967 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
DDB1-207ENST00000535967 CDCA8Q53HL2 280 aa17.71■□□□□ 0.43
DDB1-207ENST00000535967 PRDM11Q9NQV5 511 aa17.71■□□□□ 0.43
DDB1-207ENST00000535967 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
DDB1-207ENST00000535967 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 184.9 ms