RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 PLEKHG3A1L390 1219 aa10.79□□□□□ -0.68
COL21A1-212ENST00000535941 TXNDC2Q86VQ3 553 aa10.79□□□□□ -0.68
COL21A1-212ENST00000535941 NFAT5O94916 1531 aa10.79□□□□□ -0.68
COL21A1-212ENST00000535941 SLIT3O75094 1523 aa10.79□□□□□ -0.68
COL21A1-212ENST00000535941 TSHZ2Q9NRE2 1034 aa10.79□□□□□ -0.68
COL21A1-212ENST00000535941 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
COL21A1-212ENST00000535941 MINK1Q8N4C8 1332 aaPredicted RBP10.78□□□□□ -0.68
COL21A1-212ENST00000535941 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
COL21A1-212ENST00000535941 TRMT2AQ8IZ69 625 aaKnown RBP10.78□□□□□ -0.68
COL21A1-212ENST00000535941 FYB1O15117 783 aa10.77□□□□□ -0.68
COL21A1-212ENST00000535941 TMC1Q8TDI8 760 aa10.77□□□□□ -0.68
COL21A1-212ENST00000535941 POLR3GLQ9BT43 218 aa10.77□□□□□ -0.69
COL21A1-212ENST00000535941 DCCP43146 1447 aa10.77□□□□□ -0.69
COL21A1-212ENST00000535941 STK26Q9P289 416 aa10.77□□□□□ -0.69
COL21A1-212ENST00000535941 EID1Q9Y6B2 187 aa10.77□□□□□ -0.69
COL21A1-212ENST00000535941 MED1Q15648 1581 aaPredicted RBP10.76□□□□□ -0.69
COL21A1-212ENST00000535941 COL18A1P39060 1754 aa10.76□□□□□ -0.69
COL21A1-212ENST00000535941 FAM9BQ8IZU0 186 aa10.76□□□□□ -0.69
COL21A1-212ENST00000535941 SUPT16HQ9Y5B9 1047 aaKnown RBP10.75□□□□□ -0.69
COL21A1-212ENST00000535941 ADAMTS7Q9UKP4 1686 aa10.75□□□□□ -0.69
COL21A1-212ENST00000535941 PDE3BQ13370 1112 aa10.75□□□□□ -0.69
COL21A1-212ENST00000535941 ABCC6O95255 1503 aa10.75□□□□□ -0.69
COL21A1-212ENST00000535941 TERF2IPQ9NYB0 399 aa10.74□□□□□ -0.69
COL21A1-212ENST00000535941 POGKQ9P215 609 aa10.74□□□□□ -0.69
COL21A1-212ENST00000535941 ADAMTS8Q9UP79 889 aa10.74□□□□□ -0.69
COL21A1-212ENST00000535941 NHSL1Q5SYE7 1610 aa10.74□□□□□ -0.69
COL21A1-212ENST00000535941 NUDT16Q96DE0 195 aaKnown RBP10.74□□□□□ -0.69
COL21A1-212ENST00000535941 NUDCQ9Y266 331 aa10.74□□□□□ -0.69
COL21A1-212ENST00000535941 AMOTL2Q9Y2J4 779 aa10.74□□□□□ -0.69
COL21A1-212ENST00000535941 N4BP2Q86UW6 1770 aaPredicted RBP10.74□□□□□ -0.69
COL21A1-212ENST00000535941 FAM208AQ9UK61 1670 aaKnown RBP10.73□□□□□ -0.69
COL21A1-212ENST00000535941 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
COL21A1-212ENST00000535941 CABP1Q9NZU7 370 aa10.73□□□□□ -0.69
COL21A1-212ENST00000535941 CCDC61Q9Y6R9 512 aa10.73□□□□□ -0.69
COL21A1-212ENST00000535941 NCAPD2Q15021 1401 aa10.72□□□□□ -0.69
COL21A1-212ENST00000535941 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
COL21A1-212ENST00000535941 PLEKHF1Q96S99 279 aa10.72□□□□□ -0.69
COL21A1-212ENST00000535941 EIF5BO60841 1220 aaKnown RBP10.72□□□□□ -0.69
COL21A1-212ENST00000535941 ERICH6BQ5W0A0 696 aa10.72□□□□□ -0.69
COL21A1-212ENST00000535941 CCDC136Q96JN2 1154 aa10.72□□□□□ -0.69
COL21A1-212ENST00000535941 SIPA1L3O60292 1781 aaPredicted RBP10.72□□□□□ -0.69
COL21A1-212ENST00000535941 SRPK2P78362 688 aaKnown RBP10.71□□□□□ -0.69
COL21A1-212ENST00000535941 CCDC27Q2M243 656 aa10.71□□□□□ -0.7
COL21A1-212ENST00000535941 ANKLE2Q86XL3 938 aa10.71□□□□□ -0.7
COL21A1-212ENST00000535941 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
COL21A1-212ENST00000535941 ZNF692Q9BU19 519 aaPredicted RBP10.7□□□□□ -0.7
COL21A1-212ENST00000535941 KIF24Q5T7B8 1368 aa10.7□□□□□ -0.7
COL21A1-212ENST00000535941 RGPD5Q99666 1765 aa10.7□□□□□ -0.7
COL21A1-212ENST00000535941 KCNA6P17658 529 aa10.69□□□□□ -0.7
COL21A1-212ENST00000535941 HDGFL2Q7Z4V5 671 aaPredicted RBP10.69□□□□□ -0.7
COL21A1-212ENST00000535941 TTC21AQ8NDW8 1320 aa10.69□□□□□ -0.7
COL21A1-212ENST00000535941 SAFB2Q14151 953 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL21A1-212ENST00000535941 SLC26A8Q96RN1 970 aa10.69□□□□□ -0.7
COL21A1-212ENST00000535941 MORC1Q86VD1 984 aa10.68□□□□□ -0.7
COL21A1-212ENST00000535941 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
COL21A1-212ENST00000535941 TTC21BQ7Z4L5 1316 aa10.67□□□□□ -0.7
COL21A1-212ENST00000535941 NCKAP5LQ9HCH0 1330 aa10.67□□□□□ -0.7
COL21A1-212ENST00000535941 ACEP12821 1306 aa10.67□□□□□ -0.7
COL21A1-212ENST00000535941 MTHFSP49914 203 aa10.66□□□□□ -0.7
COL21A1-212ENST00000535941 POLKQ9UBT6 870 aa10.66□□□□□ -0.7
COL21A1-212ENST00000535941 PXDNQ92626 1479 aa10.66□□□□□ -0.7
COL21A1-212ENST00000535941 KDM3BQ7LBC6 1761 aa10.66□□□□□ -0.7
COL21A1-212ENST00000535941 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
COL21A1-212ENST00000535941 PKD1L3Q7Z443 1732 aa10.65□□□□□ -0.7
COL21A1-212ENST00000535941 C1orf167Q5SNV9 1468 aa10.65□□□□□ -0.7
COL21A1-212ENST00000535941 COL22A1Q8NFW1 1626 aaPredicted RBP10.65□□□□□ -0.7
COL21A1-212ENST00000535941 WNK3Q9BYP7 1800 aa10.64□□□□□ -0.71
COL21A1-212ENST00000535941 PARP4Q9UKK3 1724 aaKnown RBP10.64□□□□□ -0.71
COL21A1-212ENST00000535941 RTL1A6NKG5 1358 aa10.64□□□□□ -0.71
COL21A1-212ENST00000535941 KDRP35968 1356 aa10.64□□□□□ -0.71
COL21A1-212ENST00000535941 SLFN5Q08AF3 891 aa10.64□□□□□ -0.71
COL21A1-212ENST00000535941 GGNBP2Q9H3C7 697 aa10.64□□□□□ -0.71
COL21A1-212ENST00000535941 IL13P35225 146 aa10.63□□□□□ -0.71
COL21A1-212ENST00000535941 SHANK3Q9BYB0 1731 aa10.63□□□□□ -0.71
COL21A1-212ENST00000535941 RUNDC1Q96C34 613 aa10.63□□□□□ -0.71
COL21A1-212ENST00000535941 NME9Q86XW9 330 aa10.63□□□□□ -0.71
COL21A1-212ENST00000535941 ARHGEF10O15013 1369 aa10.62□□□□□ -0.71
COL21A1-212ENST00000535941 RSPH6AQ9H0K4 717 aa10.62□□□□□ -0.71
COL21A1-212ENST00000535941 WDR43Q15061 677 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL21A1-212ENST00000535941 SBNO1A3KN83 1393 aa10.61□□□□□ -0.71
COL21A1-212ENST00000535941 LTBP4Q8N2S1 1624 aa10.61□□□□□ -0.71
COL21A1-212ENST00000535941 USP19O94966 1318 aa10.61□□□□□ -0.71
COL21A1-212ENST00000535941 BCANQ96GW7 911 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
COL21A1-212ENST00000535941 WDR63Q8IWG1 891 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 DMRT2Q9Y5R5 561 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 PLEKHG2Q9H7P9 1386 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 CACNA1FO60840 1977 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 IL16Q14005 1332 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 PLCH1Q4KWH8 1693 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 WWC1Q8IX03 1113 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
COL21A1-212ENST00000535941 SCN11AQ9UI33 1791 aa10.59□□□□□ -0.71
COL21A1-212ENST00000535941 CFAP53Q96M91 514 aa10.59□□□□□ -0.71
COL21A1-212ENST00000535941 SENP3Q9H4L4 574 aaPredicted RBP10.59□□□□□ -0.71
COL21A1-212ENST00000535941 TRIM35Q9UPQ4 493 aa10.59□□□□□ -0.71
COL21A1-212ENST00000535941 SALL2Q9Y467 1007 aaPredicted RBP10.58□□□□□ -0.72
COL21A1-212ENST00000535941 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.72
COL21A1-212ENST00000535941 FCHSD2O94868 740 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms