RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 CRYBG1Q9Y4K1 1723 aa29.96■■■□□ 2.39
LTBR-205ENST00000535739 ONECUT3O60422 494 aaPredicted RBP29.95■■■□□ 2.39
LTBR-205ENST00000535739 COL14A1Q05707 1796 aaKnown RBP29.95■■■□□ 2.38
LTBR-205ENST00000535739 BTG4Q9NY30 223 aa29.94■■■□□ 2.38
LTBR-205ENST00000535739 CDK19Q9BWU1 502 aa29.93■■■□□ 2.38
LTBR-205ENST00000535739 BLMP54132 1417 aaPredicted RBP29.92■■■□□ 2.38
LTBR-205ENST00000535739 ZRANB1Q9UGI0 708 aa29.92■■■□□ 2.38
LTBR-205ENST00000535739 NBPF1Q3BBV0 1214 aa29.9■■■□□ 2.38
LTBR-205ENST00000535739 KRT27Q7Z3Y8 459 aa29.88■■■□□ 2.37
LTBR-205ENST00000535739 TOPAZ1Q8N9V7 1692 aa29.88■■■□□ 2.37
LTBR-205ENST00000535739 A0A0G2JS52 829 aa29.87■■■□□ 2.37
LTBR-205ENST00000535739 MYT1Q01538 1121 aa29.87■■■□□ 2.37
LTBR-205ENST00000535739 FAM98CQ17RN3 349 aaKnown RBP29.87■■■□□ 2.37
LTBR-205ENST00000535739 DEFB132Q7Z7B7 95 aa29.85■■■□□ 2.37
LTBR-205ENST00000535739 PRDM11Q9NQV5 511 aa29.84■■■□□ 2.37
LTBR-205ENST00000535739 PHRF1Q9P1Y6 1649 aaKnown RBP29.83■■■□□ 2.37
LTBR-205ENST00000535739 ACEP12821 1306 aa29.83■■■□□ 2.37
LTBR-205ENST00000535739 CCDC61Q9Y6R9 512 aa29.83■■■□□ 2.37
LTBR-205ENST00000535739 POLR3AO14802 1390 aaPredicted RBP29.82■■■□□ 2.36
LTBR-205ENST00000535739 SF3B2Q13435 895 aaKnown RBP29.82■■■□□ 2.36
LTBR-205ENST00000535739 NUTM2GQ5VZR2 741 aa29.82■■■□□ 2.36
LTBR-205ENST00000535739 NBPF8Q3BBV2 869 aa29.81■■■□□ 2.36
LTBR-205ENST00000535739 KIAA0232Q92628 1395 aa29.8■■■□□ 2.36
LTBR-205ENST00000535739 SPATA31A5Q5VU36 1347 aa29.8■■■□□ 2.36
LTBR-205ENST00000535739 SPATA31A7Q8IWB4 1347 aa29.8■■■□□ 2.36
LTBR-205ENST00000535739 PLEKHG3A1L390 1219 aa29.79■■■□□ 2.36
LTBR-205ENST00000535739 CHRNA2Q15822 529 aa29.78■■■□□ 2.36
LTBR-205ENST00000535739 ZC3H6P61129 1189 aaKnown RBP29.77■■■□□ 2.36
LTBR-205ENST00000535739 CENPJQ9HC77 1338 aaPredicted RBP29.76■■■□□ 2.36
LTBR-205ENST00000535739 SRPK2P78362 688 aaKnown RBP29.75■■■□□ 2.35
LTBR-205ENST00000535739 QRICH2Q9H0J4 1663 aa29.74■■■□□ 2.35
LTBR-205ENST00000535739 THSD7AQ9UPZ6 1657 aa29.73■■■□□ 2.35
LTBR-205ENST00000535739 FAM182BQ5T319 152 aa29.73■■■□□ 2.35
LTBR-205ENST00000535739 L3MBTL2Q969R5 705 aa29.73■■■□□ 2.35
LTBR-205ENST00000535739 CABP2Q9NPB3 220 aa29.73■■■□□ 2.35
LTBR-205ENST00000535739 ABTB2Q8N961 1025 aa29.72■■■□□ 2.35
LTBR-205ENST00000535739 STRN4Q9NRL3 753 aa29.72■■■□□ 2.35
LTBR-205ENST00000535739 PPIP5K1Q6PFW1 1433 aa29.71■■■□□ 2.35
LTBR-205ENST00000535739 SPATA31A1Q5TZJ5 1347 aa29.71■■■□□ 2.35
LTBR-205ENST00000535739 NRKQ7Z2Y5 1582 aa29.69■■■□□ 2.34
LTBR-205ENST00000535739 SIN3AQ96ST3 1273 aa29.69■■■□□ 2.34
LTBR-205ENST00000535739 BAG6P46379 1132 aa29.67■■■□□ 2.34
LTBR-205ENST00000535739 RGPD1P0DJD0 1748 aa29.66■■■□□ 2.34
LTBR-205ENST00000535739 USP19O94966 1318 aa29.65■■■□□ 2.34
LTBR-205ENST00000535739 TRPM1Q7Z4N2 1603 aa29.64■■■□□ 2.34
LTBR-205ENST00000535739 EVA1CP58658 441 aa29.64■■■□□ 2.34
LTBR-205ENST00000535739 CAMTA1Q9Y6Y1 1673 aa29.63■■■□□ 2.33
LTBR-205ENST00000535739 USP35Q9P2H5 1018 aa29.63■■■□□ 2.33
LTBR-205ENST00000535739 SSH2Q76I76 1423 aa29.62■■■□□ 2.33
LTBR-205ENST00000535739 NEUROD1Q13562 356 aa29.62■■■□□ 2.33
LTBR-205ENST00000535739 NLRP13Q86W25 1043 aa29.62■■■□□ 2.33
LTBR-205ENST00000535739 CABP1Q9NZU7 370 aa29.62■■■□□ 2.33
LTBR-205ENST00000535739 LMO7Q8WWI1 1683 aa29.62■■■□□ 2.33
LTBR-205ENST00000535739 CPDO75976 1380 aa29.62■■■□□ 2.33
LTBR-205ENST00000535739 GCP02774 474 aa29.6■■■□□ 2.33
LTBR-205ENST00000535739 EN1Q05925 392 aaPredicted RBP29.6■■■□□ 2.33
LTBR-205ENST00000535739 TNS1Q9HBL0 1735 aaKnown RBP29.59■■■□□ 2.33
LTBR-205ENST00000535739 LARP1Q6PKG0 1096 aaKnown RBP29.59■■■□□ 2.33
LTBR-205ENST00000535739 USP6P35125 1406 aa29.57■■■□□ 2.32
LTBR-205ENST00000535739 BRD4O60885 1362 aaPredicted RBP29.57■■■□□ 2.32
LTBR-205ENST00000535739 EVC2Q86UK5 1308 aa29.56■■■□□ 2.32
LTBR-205ENST00000535739 BARGINQ6ZT62 677 aa29.56■■■□□ 2.32
LTBR-205ENST00000535739 ROCK2O75116 1388 aaKnown RBP29.55■■■□□ 2.32
LTBR-205ENST00000535739 PSDA5PKW4 1024 aaPredicted RBP29.55■■■□□ 2.32
LTBR-205ENST00000535739 NLRP6P59044 892 aa29.53■■■□□ 2.32
LTBR-205ENST00000535739 FAM196AQ6ZSG2 479 aa29.53■■■□□ 2.32
LTBR-205ENST00000535739 TCP11L2Q8N4U5 519 aa29.53■■■□□ 2.32
LTBR-205ENST00000535739 ZBTB7CA1YPR0 619 aa29.52■■■□□ 2.32
LTBR-205ENST00000535739 TRIM37O94972 964 aa29.52■■■□□ 2.32
LTBR-205ENST00000535739 DISP2A7MBM2 1401 aa29.52■■■□□ 2.32
LTBR-205ENST00000535739 PIK3C2AO00443 1686 aa29.5■■■□□ 2.31
LTBR-205ENST00000535739 COL5A2P05997 1499 aaPredicted RBP29.5■■■□□ 2.31
LTBR-205ENST00000535739 PDE3BQ13370 1112 aa29.5■■■□□ 2.31
LTBR-205ENST00000535739 SLIT3O75094 1523 aa29.5■■■□□ 2.31
LTBR-205ENST00000535739 EZH2Q15910 746 aaKnown RBP29.49■■■□□ 2.31
LTBR-205ENST00000535739 LRP5O75197 1615 aa29.48■■■□□ 2.31
LTBR-205ENST00000535739 AKAP12Q02952 1782 aa29.47■■■□□ 2.31
LTBR-205ENST00000535739 THRAP3Q9Y2W1 955 aaKnown RBP29.46■■■□□ 2.31
LTBR-205ENST00000535739 CAMKK2Q96RR4 588 aa29.45■■■□□ 2.31
LTBR-205ENST00000535739 COL18A1P39060 1754 aa29.44■■■□□ 2.3
LTBR-205ENST00000535739 AATKQ6ZMQ8 1374 aa29.44■■■□□ 2.3
LTBR-205ENST00000535739 APBA3O96018 575 aa29.44■■■□□ 2.3
LTBR-205ENST00000535739 PARP4Q9UKK3 1724 aaKnown RBP29.44■■■□□ 2.3
LTBR-205ENST00000535739 R3HDM1Q15032 1099 aaKnown RBP29.43■■■□□ 2.3
LTBR-205ENST00000535739 CRB1P82279 1406 aa29.43■■■□□ 2.3
LTBR-205ENST00000535739 TTC21BQ7Z4L5 1316 aa29.43■■■□□ 2.3
LTBR-205ENST00000535739 ZNF692Q9BU19 519 aaPredicted RBP29.42■■■□□ 2.3
LTBR-205ENST00000535739 RGPD5Q99666 1765 aa29.39■■■□□ 2.3
LTBR-205ENST00000535739 AXIN2Q9Y2T1 843 aa29.38■■■□□ 2.29
LTBR-205ENST00000535739 CPSF1Q10570 1443 aaKnown RBP29.37■■■□□ 2.29
LTBR-205ENST00000535739 SOX12O15370 315 aa29.36■■■□□ 2.29
LTBR-205ENST00000535739 TOM1L2Q6ZVM7 507 aa29.36■■■□□ 2.29
LTBR-205ENST00000535739 RREB1Q92766 1687 aa29.36■■■□□ 2.29
LTBR-205ENST00000535739 ARHGEF25Q86VW2 580 aa29.35■■■□□ 2.29
LTBR-205ENST00000535739 TTC21AQ8NDW8 1320 aa29.35■■■□□ 2.29
LTBR-205ENST00000535739 KTN1Q86UP2 1357 aaKnown RBP29.35■■■□□ 2.29
LTBR-205ENST00000535739 PARD3Q8TEW0 1356 aa29.35■■■□□ 2.29
LTBR-205ENST00000535739 KCNH5Q8NCM2 988 aa29.34■■■□□ 2.29
LTBR-205ENST00000535739 CARD11Q9BXL7 1154 aa29.34■■■□□ 2.29
LTBR-205ENST00000535739 LRRC37A3O60309 1634 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms