RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 MST1RQ04912 1400 aa30.98■■■□□ 2.55
RBFOX1-206ENST00000535565 PPP2R1AP30153 589 aa30.97■■■□□ 2.55
RBFOX1-206ENST00000535565 CCDC184Q52MB2 194 aa30.97■■■□□ 2.55
RBFOX1-206ENST00000535565 GGNBP2Q9H3C7 697 aa30.96■■■□□ 2.55
RBFOX1-206ENST00000535565 TTC21BQ7Z4L5 1316 aa30.94■■■□□ 2.54
RBFOX1-206ENST00000535565 SSH2Q76I76 1423 aa30.94■■■□□ 2.54
RBFOX1-206ENST00000535565 TTC21AQ8NDW8 1320 aa30.93■■■□□ 2.54
RBFOX1-206ENST00000535565 NME9Q86XW9 330 aa30.9■■■□□ 2.54
RBFOX1-206ENST00000535565 ORAI2Q96SN7 254 aa30.9■■■□□ 2.54
RBFOX1-206ENST00000535565 LTBP4Q8N2S1 1624 aa30.89■■■□□ 2.54
RBFOX1-206ENST00000535565 TNNT2P45379 298 aaPredicted RBP30.88■■■□□ 2.53
RBFOX1-206ENST00000535565 YTHDC1Q96MU7 727 aaKnown RBP30.88■■■□□ 2.53
RBFOX1-206ENST00000535565 COG3Q96JB2 828 aa30.87■■■□□ 2.53
RBFOX1-206ENST00000535565 PSME1Q06323 249 aa30.86■■■□□ 2.53
RBFOX1-206ENST00000535565 PIK3C2AO00443 1686 aa30.85■■■□□ 2.53
RBFOX1-206ENST00000535565 SCAF1Q9H7N4 1312 aaKnown RBP30.83■■■□□ 2.53
RBFOX1-206ENST00000535565 FAM9BQ8IZU0 186 aa30.82■■■□□ 2.52
RBFOX1-206ENST00000535565 OVOS2A0A0J9YW53 1432 aa30.81■■■□□ 2.52
RBFOX1-206ENST00000535565 OVOS2Q6IE36 1432 aa30.81■■■□□ 2.52
RBFOX1-206ENST00000535565 USP54Q70EL1 1684 aa30.81■■■□□ 2.52
RBFOX1-206ENST00000535565 FOXO3O43524 673 aa30.8■■■□□ 2.52
RBFOX1-206ENST00000535565 PNISRQ8TF01 805 aaKnown RBP30.8■■■□□ 2.52
RBFOX1-206ENST00000535565 MAP2P11137 1827 aaKnown RBP30.79■■■□□ 2.52
RBFOX1-206ENST00000535565 PAK3O75914 559 aaPredicted RBP30.79■■■□□ 2.52
RBFOX1-206ENST00000535565 ZRANB1Q9UGI0 708 aa30.79■■■□□ 2.52
RBFOX1-206ENST00000535565 TRPM3Q9HCF6 1732 aaPredicted RBP30.78■■■□□ 2.52
RBFOX1-206ENST00000535565 SLAIN2Q9P270 581 aa30.78■■■□□ 2.52
RBFOX1-206ENST00000535565 USP31Q70CQ4 1352 aa30.78■■■□□ 2.52
RBFOX1-206ENST00000535565 MTHFSP49914 203 aa30.76■■■□□ 2.52
RBFOX1-206ENST00000535565 CFAP53Q96M91 514 aa30.75■■■□□ 2.51
RBFOX1-206ENST00000535565 AATKQ6ZMQ8 1374 aa30.75■■■□□ 2.51
RBFOX1-206ENST00000535565 NPHP3Q7Z494 1330 aa30.75■■■□□ 2.51
RBFOX1-206ENST00000535565 ABTB2Q8N961 1025 aa30.75■■■□□ 2.51
RBFOX1-206ENST00000535565 MARF1Q9Y4F3 1742 aaKnown RBP30.74■■■□□ 2.51
RBFOX1-206ENST00000535565 KRT28Q7Z3Y7 464 aa30.73■■■□□ 2.51
RBFOX1-206ENST00000535565 NLRP6P59044 892 aa30.71■■■□□ 2.51
RBFOX1-206ENST00000535565 BRINP3Q76B58 766 aa30.71■■■□□ 2.51
RBFOX1-206ENST00000535565 XPCQ01831 940 aaPredicted RBP30.7■■■□□ 2.5
RBFOX1-206ENST00000535565 WDR43Q15061 677 aaKnown RBP eCLIP30.69■■■□□ 2.5
RBFOX1-206ENST00000535565 ALS2Q96Q42 1657 aa30.68■■■□□ 2.5
RBFOX1-206ENST00000535565 SMG6Q86US8 1419 aaKnown RBP30.67■■■□□ 2.5
RBFOX1-206ENST00000535565 SHPRHQ149N8 1683 aa30.67■■■□□ 2.5
RBFOX1-206ENST00000535565 POLKQ9UBT6 870 aa30.66■■■□□ 2.5
RBFOX1-206ENST00000535565 SBNO1A3KN83 1393 aa30.66■■■□□ 2.5
RBFOX1-206ENST00000535565 PXDNQ92626 1479 aa30.66■■■□□ 2.5
RBFOX1-206ENST00000535565 NUTM2GQ5VZR2 741 aa30.65■■■□□ 2.5
RBFOX1-206ENST00000535565 CDK12Q9NYV4 1490 aaPredicted RBP30.64■■■□□ 2.49
RBFOX1-206ENST00000535565 INSRP06213 1382 aa30.63■■■□□ 2.49
RBFOX1-206ENST00000535565 NHSL1Q5SYE7 1610 aa30.63■■■□□ 2.49
RBFOX1-206ENST00000535565 FBLN1P23142 703 aa30.62■■■□□ 2.49
RBFOX1-206ENST00000535565 PPM1GO15355 546 aaPredicted RBP30.62■■■□□ 2.49
RBFOX1-206ENST00000535565 DDX17Q92841 729 aaKnown RBP30.62■■■□□ 2.49
RBFOX1-206ENST00000535565 PNPLA6Q8IY17 1366 aa30.61■■■□□ 2.49
RBFOX1-206ENST00000535565 HNRNPUQ00839 825 aaKnown RBP eCLIP30.61■■■□□ 2.49
RBFOX1-206ENST00000535565 LMOD2Q6P5Q4 547 aa30.61■■■□□ 2.49
RBFOX1-206ENST00000535565 EMILIN1Q9Y6C2 1016 aa30.61■■■□□ 2.49
RBFOX1-206ENST00000535565 COL3A1P02461 1466 aaPredicted RBP30.61■■■□□ 2.49
RBFOX1-206ENST00000535565 TNS3Q68CZ2 1445 aa30.6■■■□□ 2.49
RBFOX1-206ENST00000535565 RRS1Q15050 365 aaKnown RBP30.6■■■□□ 2.49
RBFOX1-206ENST00000535565 ROBO1Q9Y6N7 1651 aa30.59■■■□□ 2.49
RBFOX1-206ENST00000535565 SOX12O15370 315 aa30.58■■■□□ 2.49
RBFOX1-206ENST00000535565 CENPBP07199 599 aaPredicted RBP30.58■■■□□ 2.49
RBFOX1-206ENST00000535565 ADAMTS8Q9UP79 889 aa30.58■■■□□ 2.49
RBFOX1-206ENST00000535565 NUDCQ9Y266 331 aa30.57■■■□□ 2.48
RBFOX1-206ENST00000535565 SLIT3O75094 1523 aa30.57■■■□□ 2.48
RBFOX1-206ENST00000535565 KCNH5Q8NCM2 988 aa30.56■■■□□ 2.48
RBFOX1-206ENST00000535565 BLMP54132 1417 aaPredicted RBP30.56■■■□□ 2.48
RBFOX1-206ENST00000535565 LTN1O94822 1766 aa30.56■■■□□ 2.48
RBFOX1-206ENST00000535565 ARHGEF10O15013 1369 aa30.55■■■□□ 2.48
RBFOX1-206ENST00000535565 PEAK1Q9H792 1746 aa30.55■■■□□ 2.48
RBFOX1-206ENST00000535565 IQSEC2Q5JU85 1478 aa30.54■■■□□ 2.48
RBFOX1-206ENST00000535565 SOS2Q07890 1332 aaPredicted RBP30.54■■■□□ 2.48
RBFOX1-206ENST00000535565 DIAPH1O60610 1272 aaKnown RBP30.54■■■□□ 2.48
RBFOX1-206ENST00000535565 NFAT5O94916 1531 aa30.54■■■□□ 2.48
RBFOX1-206ENST00000535565 SPATA31A3Q5VYP0 1347 aa30.54■■■□□ 2.48
RBFOX1-206ENST00000535565 USP19O94966 1318 aa30.53■■■□□ 2.48
RBFOX1-206ENST00000535565 MAP3K19Q56UN5 1328 aa30.52■■■□□ 2.48
RBFOX1-206ENST00000535565 KIF24Q5T7B8 1368 aa30.51■■■□□ 2.48
RBFOX1-206ENST00000535565 TOM1O60784 492 aa30.5■■■□□ 2.47
RBFOX1-206ENST00000535565 FLT4P35916 1363 aa30.5■■■□□ 2.47
RBFOX1-206ENST00000535565 PHRF1Q9P1Y6 1649 aaKnown RBP30.49■■■□□ 2.47
RBFOX1-206ENST00000535565 AHDC1Q5TGY3 1603 aaPredicted RBP30.49■■■□□ 2.47
RBFOX1-206ENST00000535565 MED1Q15648 1581 aaPredicted RBP30.49■■■□□ 2.47
RBFOX1-206ENST00000535565 AMPHP49418 695 aa30.48■■■□□ 2.47
RBFOX1-206ENST00000535565 CRYBG1Q9Y4K1 1723 aa30.47■■■□□ 2.47
RBFOX1-206ENST00000535565 U2SURPO15042 1029 aaKnown RBP30.46■■■□□ 2.47
RBFOX1-206ENST00000535565 GCP02774 474 aa30.46■■■□□ 2.47
RBFOX1-206ENST00000535565 U2AF1L5P0DN76 240 aaPredicted RBP30.46■■■□□ 2.47
RBFOX1-206ENST00000535565 U2AF1Q01081 240 aaKnown RBP eCLIP30.46■■■□□ 2.47
RBFOX1-206ENST00000535565 RTL1A6NKG5 1358 aa30.46■■■□□ 2.47
RBFOX1-206ENST00000535565 ZBED9Q6R2W3 1325 aa30.44■■■□□ 2.46
RBFOX1-206ENST00000535565 PLEKHG5O94827 1062 aa30.42■■■□□ 2.46
RBFOX1-206ENST00000535565 IL13P35225 146 aa30.42■■■□□ 2.46
RBFOX1-206ENST00000535565 HSP90AB2PQ58FF8 381 aa30.41■■■□□ 2.46
RBFOX1-206ENST00000535565 PHLPP1O60346 1717 aa30.4■■■□□ 2.46
RBFOX1-206ENST00000535565 UBAP1LF5GYI3 381 aa30.39■■■□□ 2.46
RBFOX1-206ENST00000535565 HOXC9P31274 260 aa30.39■■■□□ 2.46
RBFOX1-206ENST00000535565 CCDC146Q8IYE0 955 aa30.39■■■□□ 2.46
RBFOX1-206ENST00000535565 EIF4A2Q14240 407 aaKnown RBP30.38■■■□□ 2.45
RBFOX1-206ENST00000535565 PNNQ9H307 717 aaKnown RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms