RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 EVA1CP58658 441 aa19■□□□□ 0.63
CLSTN3-205ENST00000535452 ATP7BP35670 1465 aa19■□□□□ 0.63
CLSTN3-205ENST00000535452 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
CLSTN3-205ENST00000535452 GLI3P10071 1580 aa18.99■□□□□ 0.63
CLSTN3-205ENST00000535452 BAG6P46379 1132 aa18.99■□□□□ 0.63
CLSTN3-205ENST00000535452 FAM98CQ17RN3 349 aaKnown RBP18.99■□□□□ 0.63
CLSTN3-205ENST00000535452 ARHGEF28Q8N1W1 1705 aaKnown RBP18.99■□□□□ 0.63
CLSTN3-205ENST00000535452 COL14A1Q05707 1796 aaKnown RBP18.98■□□□□ 0.63
CLSTN3-205ENST00000535452 KIAA1210Q9ULL0 1709 aa18.98■□□□□ 0.63
CLSTN3-205ENST00000535452 ABTB2Q8N961 1025 aa18.98■□□□□ 0.63
CLSTN3-205ENST00000535452 ABCA3Q99758 1704 aa18.97■□□□□ 0.63
CLSTN3-205ENST00000535452 ONECUT3O60422 494 aaPredicted RBP18.96■□□□□ 0.63
CLSTN3-205ENST00000535452 NBPF8Q3BBV2 869 aa18.96■□□□□ 0.63
CLSTN3-205ENST00000535452 STRN4Q9NRL3 753 aa18.96■□□□□ 0.63
CLSTN3-205ENST00000535452 ACEP12821 1306 aa18.96■□□□□ 0.63
CLSTN3-205ENST00000535452 TRPM3Q9HCF6 1732 aaPredicted RBP18.95■□□□□ 0.62
CLSTN3-205ENST00000535452 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
CLSTN3-205ENST00000535452 ZC3H6P61129 1189 aaKnown RBP18.94■□□□□ 0.62
CLSTN3-205ENST00000535452 NUTM2GQ5VZR2 741 aa18.94■□□□□ 0.62
CLSTN3-205ENST00000535452 ALS2Q96Q42 1657 aa18.93■□□□□ 0.62
CLSTN3-205ENST00000535452 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
CLSTN3-205ENST00000535452 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
CLSTN3-205ENST00000535452 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
CLSTN3-205ENST00000535452 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
CLSTN3-205ENST00000535452 SPATA31A5Q5VU36 1347 aa18.92■□□□□ 0.62
CLSTN3-205ENST00000535452 EVC2Q86UK5 1308 aa18.92■□□□□ 0.62
CLSTN3-205ENST00000535452 SPATA31A7Q8IWB4 1347 aa18.92■□□□□ 0.62
CLSTN3-205ENST00000535452 POLR3AO14802 1390 aaPredicted RBP18.92■□□□□ 0.62
CLSTN3-205ENST00000535452 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
CLSTN3-205ENST00000535452 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
CLSTN3-205ENST00000535452 PDE3BQ13370 1112 aa18.9■□□□□ 0.62
CLSTN3-205ENST00000535452 CHRNA2Q15822 529 aa18.9■□□□□ 0.62
CLSTN3-205ENST00000535452 CABP2Q9NPB3 220 aa18.9■□□□□ 0.62
CLSTN3-205ENST00000535452 USP35Q9P2H5 1018 aa18.9■□□□□ 0.62
CLSTN3-205ENST00000535452 ZBTB7CA1YPR0 619 aa18.89■□□□□ 0.61
CLSTN3-205ENST00000535452 DEFB132Q7Z7B7 95 aa18.89■□□□□ 0.61
CLSTN3-205ENST00000535452 L3MBTL2Q969R5 705 aa18.89■□□□□ 0.61
CLSTN3-205ENST00000535452 ROCK2O75116 1388 aaKnown RBP18.89■□□□□ 0.61
CLSTN3-205ENST00000535452 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
CLSTN3-205ENST00000535452 NRAPQ86VF7 1730 aa18.86■□□□□ 0.61
CLSTN3-205ENST00000535452 SPATA31A1Q5TZJ5 1347 aa18.86■□□□□ 0.61
CLSTN3-205ENST00000535452 FAM196AQ6ZSG2 479 aa18.86■□□□□ 0.61
CLSTN3-205ENST00000535452 NLRP6P59044 892 aa18.85■□□□□ 0.61
CLSTN3-205ENST00000535452 CABP1Q9NZU7 370 aa18.85■□□□□ 0.61
CLSTN3-205ENST00000535452 C11orf95C9JLR9 678 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-205ENST00000535452 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-205ENST00000535452 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.61
CLSTN3-205ENST00000535452 GCP02774 474 aa18.83■□□□□ 0.6
CLSTN3-205ENST00000535452 TCP11L2Q8N4U5 519 aa18.83■□□□□ 0.6
CLSTN3-205ENST00000535452 QRICH2Q9H0J4 1663 aa18.82■□□□□ 0.6
CLSTN3-205ENST00000535452 PHRF1Q9P1Y6 1649 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-205ENST00000535452 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
CLSTN3-205ENST00000535452 THRAP3Q9Y2W1 955 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-205ENST00000535452 CPDO75976 1380 aa18.81■□□□□ 0.6
CLSTN3-205ENST00000535452 BARGINQ6ZT62 677 aa18.81■□□□□ 0.6
CLSTN3-205ENST00000535452 KCNH5Q8NCM2 988 aa18.81■□□□□ 0.6
CLSTN3-205ENST00000535452 SSH2Q76I76 1423 aa18.81■□□□□ 0.6
CLSTN3-205ENST00000535452 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
CLSTN3-205ENST00000535452 USP19O94966 1318 aa18.79■□□□□ 0.6
CLSTN3-205ENST00000535452 EN1Q05925 392 aaPredicted RBP18.79■□□□□ 0.6
CLSTN3-205ENST00000535452 FAM182BQ5T319 152 aa18.79■□□□□ 0.6
CLSTN3-205ENST00000535452 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
CLSTN3-205ENST00000535452 CRYBG1Q9Y4K1 1723 aa18.78■□□□□ 0.6
CLSTN3-205ENST00000535452 USP6P35125 1406 aa18.78■□□□□ 0.6
CLSTN3-205ENST00000535452 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
CLSTN3-205ENST00000535452 TOM1L2Q6ZVM7 507 aa18.78■□□□□ 0.6
CLSTN3-205ENST00000535452 TRIM37O94972 964 aa18.77■□□□□ 0.6
CLSTN3-205ENST00000535452 APBA3O96018 575 aa18.77■□□□□ 0.6
CLSTN3-205ENST00000535452 CSB-PGBD3P0DP91 1061 aa18.77■□□□□ 0.6
CLSTN3-205ENST00000535452 CARD11Q9BXL7 1154 aa18.77■□□□□ 0.6
CLSTN3-205ENST00000535452 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
CLSTN3-205ENST00000535452 NBPF14Q5TI25 921 aa18.76■□□□□ 0.59
CLSTN3-205ENST00000535452 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
CLSTN3-205ENST00000535452 EP400Q96L91 3159 aa18.75■□□□□ 0.59
CLSTN3-205ENST00000535452 PARD3Q8TEW0 1356 aa18.75■□□□□ 0.59
CLSTN3-205ENST00000535452 THSD7AQ9UPZ6 1657 aa18.74■□□□□ 0.59
CLSTN3-205ENST00000535452 PSDA5PKW4 1024 aaPredicted RBP18.74■□□□□ 0.59
CLSTN3-205ENST00000535452 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
CLSTN3-205ENST00000535452 CRB1P82279 1406 aa18.74■□□□□ 0.59
CLSTN3-205ENST00000535452 SOX12O15370 315 aa18.73■□□□□ 0.59
CLSTN3-205ENST00000535452 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
CLSTN3-205ENST00000535452 HDGFL2Q7Z4V5 671 aaPredicted RBP18.73■□□□□ 0.59
CLSTN3-205ENST00000535452 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
CLSTN3-205ENST00000535452 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
CLSTN3-205ENST00000535452 AATKQ6ZMQ8 1374 aa18.72■□□□□ 0.59
CLSTN3-205ENST00000535452 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
CLSTN3-205ENST00000535452 DDB1Q16531 1140 aa18.72■□□□□ 0.59
CLSTN3-205ENST00000535452 CAMTA1Q9Y6Y1 1673 aa18.71■□□□□ 0.59
CLSTN3-205ENST00000535452 TTC21BQ7Z4L5 1316 aa18.71■□□□□ 0.59
CLSTN3-205ENST00000535452 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
CLSTN3-205ENST00000535452 DISP2A7MBM2 1401 aa18.7■□□□□ 0.58
CLSTN3-205ENST00000535452 EZH2Q15910 746 aaKnown RBP18.7■□□□□ 0.58
CLSTN3-205ENST00000535452 R3HDM1Q15032 1099 aaKnown RBP18.69■□□□□ 0.58
CLSTN3-205ENST00000535452 TERF2IPQ9NYB0 399 aa18.69■□□□□ 0.58
CLSTN3-205ENST00000535452 OVOS2A0A0G2JMS6 1433 aa18.67■□□□□ 0.58
CLSTN3-205ENST00000535452 OVOS2A0A0J9YW53 1432 aa18.67■□□□□ 0.58
CLSTN3-205ENST00000535452 OVOS2Q6IE36 1432 aa18.67■□□□□ 0.58
CLSTN3-205ENST00000535452 WDR17Q8IZU2 1322 aa18.67■□□□□ 0.58
CLSTN3-205ENST00000535452 SBNO2Q9Y2G9 1366 aa18.67■□□□□ 0.58
CLSTN3-205ENST00000535452 SLIT3O75094 1523 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms