RNA–Protein interactions for RNA: ENST00000535419.2

PGRMC1-202, Transcript of progesterone receptor membrane component 1, humanhuman

TSL 2 BASIC

Gene PGRMC1, Length 1,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGRMC1-202ENST00000535419 NGDNQ8NEJ9 315 aaKnown RBP23.51■■□□□ 1.35
PGRMC1-202ENST00000535419 CFAP53Q96M91 514 aa23.51■■□□□ 1.35
PGRMC1-202ENST00000535419 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
PGRMC1-202ENST00000535419 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
PGRMC1-202ENST00000535419 COG3Q96JB2 828 aa23.48■■□□□ 1.35
PGRMC1-202ENST00000535419 SCAF1Q9H7N4 1312 aaKnown RBP23.47■■□□□ 1.35
PGRMC1-202ENST00000535419 SSH2Q76I76 1423 aa23.47■■□□□ 1.35
PGRMC1-202ENST00000535419 SENP3-EIF4A1A0A087X0R7 540 aa23.46■■□□□ 1.35
PGRMC1-202ENST00000535419 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
PGRMC1-202ENST00000535419 TTC21AQ8NDW8 1320 aa23.45■■□□□ 1.34
PGRMC1-202ENST00000535419 PHF8Q9UPP1 1060 aa23.44■■□□□ 1.34
PGRMC1-202ENST00000535419 GTF3C3Q9Y5Q9 886 aa23.44■■□□□ 1.34
PGRMC1-202ENST00000535419 TMEM94Q12767 1356 aa23.43■■□□□ 1.34
PGRMC1-202ENST00000535419 MAP2P11137 1827 aaKnown RBP23.43■■□□□ 1.34
PGRMC1-202ENST00000535419 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
PGRMC1-202ENST00000535419 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
PGRMC1-202ENST00000535419 OVOS2A0A0J9YW53 1432 aa23.41■■□□□ 1.34
PGRMC1-202ENST00000535419 OVOS2Q6IE36 1432 aa23.41■■□□□ 1.34
PGRMC1-202ENST00000535419 AATKQ6ZMQ8 1374 aa23.41■■□□□ 1.34
PGRMC1-202ENST00000535419 COL3A1P02461 1466 aaPredicted RBP23.41■■□□□ 1.34
PGRMC1-202ENST00000535419 ESCO1Q5FWF5 840 aa23.4■■□□□ 1.34
PGRMC1-202ENST00000535419 POLKQ9UBT6 870 aa23.4■■□□□ 1.34
PGRMC1-202ENST00000535419 FBLN1P23142 703 aa23.38■■□□□ 1.33
PGRMC1-202ENST00000535419 SALL2Q9Y467 1007 aaPredicted RBP23.38■■□□□ 1.33
PGRMC1-202ENST00000535419 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
PGRMC1-202ENST00000535419 PNPLA6Q8IY17 1366 aa23.38■■□□□ 1.33
PGRMC1-202ENST00000535419 DCCP43146 1447 aa23.37■■□□□ 1.33
PGRMC1-202ENST00000535419 SMG6Q86US8 1419 aaKnown RBP23.37■■□□□ 1.33
PGRMC1-202ENST00000535419 CCDC146Q8IYE0 955 aa23.37■■□□□ 1.33
PGRMC1-202ENST00000535419 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
PGRMC1-202ENST00000535419 USP31Q70CQ4 1352 aa23.35■■□□□ 1.33
PGRMC1-202ENST00000535419 PPM1GO15355 546 aaPredicted RBP23.35■■□□□ 1.33
PGRMC1-202ENST00000535419 ATF3P18847 181 aa23.35■■□□□ 1.33
PGRMC1-202ENST00000535419 C1orf167Q5SNV9 1468 aa23.35■■□□□ 1.33
PGRMC1-202ENST00000535419 CDK12Q9NYV4 1490 aaPredicted RBP23.35■■□□□ 1.33
PGRMC1-202ENST00000535419 EMILIN1Q9Y6C2 1016 aa23.35■■□□□ 1.33
PGRMC1-202ENST00000535419 XIRP1Q702N8 1843 aaKnown RBP23.34■■□□□ 1.33
PGRMC1-202ENST00000535419 DIAPH1O60610 1272 aaKnown RBP23.34■■□□□ 1.33
PGRMC1-202ENST00000535419 ORAI2Q96SN7 254 aa23.34■■□□□ 1.33
PGRMC1-202ENST00000535419 KIF1AQ12756 1690 aa23.34■■□□□ 1.33
PGRMC1-202ENST00000535419 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 ZNF335Q9H4Z2 1342 aaPredicted RBP23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 USP54Q70EL1 1684 aa23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 MSH6P52701 1360 aa23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 MST1RQ04912 1400 aa23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 PAK3O75914 559 aaPredicted RBP23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 PSME1Q06323 249 aa23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 RRS1Q15050 365 aaKnown RBP23.32■■□□□ 1.32
PGRMC1-202ENST00000535419 U2SURPO15042 1029 aaKnown RBP23.31■■□□□ 1.32
PGRMC1-202ENST00000535419 PDE3BQ13370 1112 aa23.31■■□□□ 1.32
PGRMC1-202ENST00000535419 DMRT2Q9Y5R5 561 aa23.31■■□□□ 1.32
PGRMC1-202ENST00000535419 APAF1O14727 1248 aa23.3■■□□□ 1.32
PGRMC1-202ENST00000535419 LRRC7Q96NW7 1537 aa23.3■■□□□ 1.32
PGRMC1-202ENST00000535419 NLRP6P59044 892 aa23.29■■□□□ 1.32
PGRMC1-202ENST00000535419 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
PGRMC1-202ENST00000535419 RUNDC1Q96C34 613 aa23.29■■□□□ 1.32
PGRMC1-202ENST00000535419 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
PGRMC1-202ENST00000535419 ABTB2Q8N961 1025 aa23.29■■□□□ 1.32
PGRMC1-202ENST00000535419 FOXO3O43524 673 aa23.27■■□□□ 1.32
PGRMC1-202ENST00000535419 SOX12O15370 315 aa23.26■■□□□ 1.31
PGRMC1-202ENST00000535419 NGEFQ8N5V2 710 aa23.26■■□□□ 1.31
PGRMC1-202ENST00000535419 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
PGRMC1-202ENST00000535419 NUTM2GQ5VZR2 741 aa23.25■■□□□ 1.31
PGRMC1-202ENST00000535419 PEAK1Q9H792 1746 aa23.24■■□□□ 1.31
PGRMC1-202ENST00000535419 ZNF521Q96K83 1311 aa23.23■■□□□ 1.31
PGRMC1-202ENST00000535419 TRPM3Q9HCF6 1732 aaPredicted RBP23.23■■□□□ 1.31
PGRMC1-202ENST00000535419 IL13P35225 146 aa23.22■■□□□ 1.31
PGRMC1-202ENST00000535419 XPCQ01831 940 aaPredicted RBP23.22■■□□□ 1.31
PGRMC1-202ENST00000535419 TCP11L2Q8N4U5 519 aa23.22■■□□□ 1.31
PGRMC1-202ENST00000535419 SUPT16HQ9Y5B9 1047 aaKnown RBP23.22■■□□□ 1.31
PGRMC1-202ENST00000535419 MAP3K19Q56UN5 1328 aa23.21■■□□□ 1.31
PGRMC1-202ENST00000535419 CDCA7LQ96GN5 454 aa23.21■■□□□ 1.31
PGRMC1-202ENST00000535419 PNNQ9H307 717 aaKnown RBP23.21■■□□□ 1.31
PGRMC1-202ENST00000535419 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
PGRMC1-202ENST00000535419 SBNO1A3KN83 1393 aa23.19■■□□□ 1.3
PGRMC1-202ENST00000535419 NEFLP07196 543 aa23.19■■□□□ 1.3
PGRMC1-202ENST00000535419 PLEKHF1Q96S99 279 aa23.19■■□□□ 1.3
PGRMC1-202ENST00000535419 FCHSD2O94868 740 aa23.18■■□□□ 1.3
PGRMC1-202ENST00000535419 FLT4P35916 1363 aa23.18■■□□□ 1.3
PGRMC1-202ENST00000535419 MAPK8IP3Q9UPT6 1336 aa23.18■■□□□ 1.3
PGRMC1-202ENST00000535419 GOLGA2Q08379 1002 aa23.17■■□□□ 1.3
PGRMC1-202ENST00000535419 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
PGRMC1-202ENST00000535419 RRP7AQ9Y3A4 280 aaKnown RBP23.17■■□□□ 1.3
PGRMC1-202ENST00000535419 AMPHP49418 695 aa23.16■■□□□ 1.3
PGRMC1-202ENST00000535419 HSP90AB2PQ58FF8 381 aa23.16■■□□□ 1.3
PGRMC1-202ENST00000535419 EIF4A2Q14240 407 aaKnown RBP23.15■■□□□ 1.3
PGRMC1-202ENST00000535419 RSPH6AQ9H0K4 717 aa23.15■■□□□ 1.3
PGRMC1-202ENST00000535419 NPHP3Q7Z494 1330 aa23.15■■□□□ 1.3
PGRMC1-202ENST00000535419 KIF24Q5T7B8 1368 aa23.15■■□□□ 1.3
PGRMC1-202ENST00000535419 NCBP3Q53F19 620 aaKnown RBP23.14■■□□□ 1.3
PGRMC1-202ENST00000535419 ALS2Q96Q42 1657 aa23.14■■□□□ 1.29
PGRMC1-202ENST00000535419 NFAT5O94916 1531 aa23.14■■□□□ 1.29
PGRMC1-202ENST00000535419 HMOX1P09601 288 aa23.14■■□□□ 1.29
PGRMC1-202ENST00000535419 LMOD2Q6P5Q4 547 aa23.14■■□□□ 1.29
PGRMC1-202ENST00000535419 WWC1Q8IX03 1113 aa23.14■■□□□ 1.29
PGRMC1-202ENST00000535419 LTN1O94822 1766 aa23.14■■□□□ 1.29
PGRMC1-202ENST00000535419 PRKAR2BP31323 418 aa23.13■■□□□ 1.29
PGRMC1-202ENST00000535419 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
PGRMC1-202ENST00000535419 KCNH5Q8NCM2 988 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms