RNA–Protein interactions for RNA: ENST00000534903.1

NPIPB3-206, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-206ENST00000534903 TRAK1Q9UPV9 953 aa7.42□□□□□ -1.22
NPIPB3-206ENST00000534903 EVC2Q86UK5 1308 aa7.42□□□□□ -1.22
NPIPB3-206ENST00000534903 TMEM132EQ6IEE7 984 aa7.41□□□□□ -1.22
NPIPB3-206ENST00000534903 NLRP13Q86W25 1043 aa7.41□□□□□ -1.22
NPIPB3-206ENST00000534903 TRPC5Q9UL62 973 aaPredicted RBP7.41□□□□□ -1.22
NPIPB3-206ENST00000534903 INSRP06213 1382 aa7.41□□□□□ -1.22
NPIPB3-206ENST00000534903 ABCC11Q96J66 1382 aa7.41□□□□□ -1.22
NPIPB3-206ENST00000534903 PIK3R4Q99570 1358 aa7.41□□□□□ -1.22
NPIPB3-206ENST00000534903 DCCP43146 1447 aa7.41□□□□□ -1.22
NPIPB3-206ENST00000534903 ZBTB22O15209 634 aa7.4□□□□□ -1.22
NPIPB3-206ENST00000534903 FXR2P51116 673 aaKnown RBP eCLIP7.4□□□□□ -1.22
NPIPB3-206ENST00000534903 KNSTRNQ9Y448 316 aa7.4□□□□□ -1.22
NPIPB3-206ENST00000534903 ADGRB2O60241 1585 aa7.4□□□□□ -1.22
NPIPB3-206ENST00000534903 ADAMTS13Q76LX8 1427 aa7.39□□□□□ -1.23
NPIPB3-206ENST00000534903 PNPLA6Q8IY17 1366 aa7.39□□□□□ -1.23
NPIPB3-206ENST00000534903 ANKRD36BQ8N2N9 1353 aa7.39□□□□□ -1.23
NPIPB3-206ENST00000534903 FNBP4Q8N3X1 1017 aaPredicted RBP7.39□□□□□ -1.23
NPIPB3-206ENST00000534903 NSD3Q9BZ95 1437 aa7.38□□□□□ -1.23
NPIPB3-206ENST00000534903 NSD2O96028 1365 aa7.38□□□□□ -1.23
NPIPB3-206ENST00000534903 ZBED9Q6R2W3 1325 aa7.38□□□□□ -1.23
NPIPB3-206ENST00000534903 CCDC184Q52MB2 194 aa7.38□□□□□ -1.23
NPIPB3-206ENST00000534903 AMER1Q5JTC6 1135 aaPredicted RBP7.38□□□□□ -1.23
NPIPB3-206ENST00000534903 USP21Q9UK80 565 aa7.38□□□□□ -1.23
NPIPB3-206ENST00000534903 ATP7BP35670 1465 aa7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 PTCH1Q13635 1447 aa7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 HNRNPUQ00839 825 aaKnown RBP eCLIP7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 TMC1Q8TDI8 760 aa7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 PRAM1Q96QH2 718 aa7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 ANKRD26Q9UPS8 1709 aa7.37□□□□□ -1.23
NPIPB3-206ENST00000534903 ATRNO75882 1429 aa7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 BLMP54132 1417 aaPredicted RBP7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 METP08581 1390 aa7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 CC2D1BQ5T0F9 858 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 FAM9BQ8IZU0 186 aa7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 POGKQ9P215 609 aa7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 LRP5O75197 1615 aa7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 CHD2O14647 1828 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-206ENST00000534903 PITPNM1O00562 1244 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 ADAMTS2O95450 1211 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 PNISRQ8TF01 805 aaKnown RBP7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 STK26Q9P289 416 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 AMOTL2Q9Y2J4 779 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 GTF3C3Q9Y5Q9 886 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 KIF20BQ96Q89 1820 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 MST1RQ04912 1400 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 TOPAZ1Q8N9V7 1692 aa7.35□□□□□ -1.23
NPIPB3-206ENST00000534903 A0A1W2PP64 1363 aa7.34□□□□□ -1.23
NPIPB3-206ENST00000534903 CDC42BPGQ6DT37 1551 aa7.34□□□□□ -1.23
NPIPB3-206ENST00000534903 CGNL1Q0VF96 1302 aa7.34□□□□□ -1.23
NPIPB3-206ENST00000534903 MINK1Q8N4C8 1332 aaPredicted RBP7.34□□□□□ -1.23
NPIPB3-206ENST00000534903 GJD4Q96KN9 370 aaPredicted RBP7.34□□□□□ -1.23
NPIPB3-206ENST00000534903 CD163L1Q9NR16 1453 aa7.34□□□□□ -1.23
NPIPB3-206ENST00000534903 PLEKHH1Q9ULM0 1364 aa7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 SOS2Q07890 1332 aaPredicted RBP7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 PPP2R1AP30153 589 aa7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 SF3B2Q13435 895 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 CNGB1Q14028 1251 aaPredicted RBP7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 SAFB2Q14151 953 aaKnown RBP eCLIP7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 CARD14Q9BXL6 1004 aa7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 EP400Q96L91 3159 aa7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 ROBO2Q9HCK4 1378 aa7.33□□□□□ -1.24
NPIPB3-206ENST00000534903 ITSN1Q15811 1721 aa7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 MON2Q7Z3U7 1717 aa7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 SLC12A5Q9H2X9 1139 aa7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 CABP2Q9NPB3 220 aa7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 TERF2IPQ9NYB0 399 aa7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 AKAP12Q02952 1782 aa7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 PTPRUQ92729 1446 aa7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 POLR3AO14802 1390 aaPredicted RBP7.32□□□□□ -1.24
NPIPB3-206ENST00000534903 BCL9LQ86UU0 1499 aa7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 NHSL1Q5SYE7 1610 aa7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 YY1P25490 414 aa7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 EDC4Q6P2E9 1401 aaKnown RBP7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 NRKQ7Z2Y5 1582 aa7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 HDGFL2Q7Z4V5 671 aaPredicted RBP7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 DEFB132Q7Z7B7 95 aa7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 DDX17Q92841 729 aaKnown RBP7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 CDK19Q9BWU1 502 aa7.31□□□□□ -1.24
NPIPB3-206ENST00000534903 CPSF1Q10570 1443 aaKnown RBP7.3□□□□□ -1.24
NPIPB3-206ENST00000534903 PPIP5K1Q6PFW1 1433 aa7.3□□□□□ -1.24
NPIPB3-206ENST00000534903 SMG6Q86US8 1419 aaKnown RBP7.3□□□□□ -1.24
NPIPB3-206ENST00000534903 WASLO00401 505 aaPredicted RBP7.3□□□□□ -1.24
NPIPB3-206ENST00000534903 MYCNP04198 464 aaPredicted RBP7.3□□□□□ -1.24
NPIPB3-206ENST00000534903 IFFO2Q5TF58 517 aa7.3□□□□□ -1.24
NPIPB3-206ENST00000534903 ADGRL3Q9HAR2 1447 aa7.29□□□□□ -1.24
NPIPB3-206ENST00000534903 WDR43Q15061 677 aaKnown RBP eCLIP7.29□□□□□ -1.24
NPIPB3-206ENST00000534903 WAPLQ7Z5K2 1190 aa7.29□□□□□ -1.24
NPIPB3-206ENST00000534903 MORC1Q86VD1 984 aa7.29□□□□□ -1.24
NPIPB3-206ENST00000534903 ANKARQ7Z5J8 1434 aa7.28□□□□□ -1.24
NPIPB3-206ENST00000534903 FMN2Q9NZ56 1722 aa7.28□□□□□ -1.24
NPIPB3-206ENST00000534903 ONECUT3O60422 494 aaPredicted RBP7.28□□□□□ -1.24
NPIPB3-206ENST00000534903 NEFLP07196 543 aa7.28□□□□□ -1.24
NPIPB3-206ENST00000534903 BAG6P46379 1132 aa7.28□□□□□ -1.24
NPIPB3-206ENST00000534903 UNC5CLQ8IV45 518 aa7.28□□□□□ -1.24
NPIPB3-206ENST00000534903 C1orf167Q5SNV9 1468 aa7.28□□□□□ -1.24
NPIPB3-206ENST00000534903 NALCNQ8IZF0 1738 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms