RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CHRNA4P43681 627 aa3.44□□□□□ -1.86
COPB1-212ENST00000534771 RSPO4Q2I0M5 234 aaPredicted RBP3.44□□□□□ -1.86
COPB1-212ENST00000534771 PADI6Q6TGC4 694 aa3.44□□□□□ -1.86
COPB1-212ENST00000534771 RBM27Q9P2N5 1060 aaKnown RBP3.44□□□□□ -1.86
COPB1-212ENST00000534771 RNF114Q9Y508 228 aa3.44□□□□□ -1.86
COPB1-212ENST00000534771 SOS2Q07890 1332 aaPredicted RBP3.44□□□□□ -1.86
COPB1-212ENST00000534771 RGL2O15211 777 aa3.43□□□□□ -1.86
COPB1-212ENST00000534771 PRIM1P49642 420 aaKnown RBP3.43□□□□□ -1.86
COPB1-212ENST00000534771 KRTAP1-1Q07627 177 aa3.43□□□□□ -1.86
COPB1-212ENST00000534771 NNTQ13423 1086 aa3.43□□□□□ -1.86
COPB1-212ENST00000534771 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.43□□□□□ -1.863e-6■■□□□ 14.3
COPB1-212ENST00000534771 CCDC24Q8N4L8 307 aa3.43□□□□□ -1.86
COPB1-212ENST00000534771 TTC13Q8NBP0 860 aa3.43□□□□□ -1.86
COPB1-212ENST00000534771 FIGNL2A6NMB9 653 aa3.42□□□□□ -1.86
COPB1-212ENST00000534771 ITGA6P23229 1130 aa3.42□□□□□ -1.86
COPB1-212ENST00000534771 PKD2Q13563 968 aa3.42□□□□□ -1.86
COPB1-212ENST00000534771 PRSS36Q5K4E3 855 aa3.42□□□□□ -1.86
COPB1-212ENST00000534771 CDHR5Q9HBB8 845 aa3.42□□□□□ -1.86
COPB1-212ENST00000534771 DNAJB2P25686 324 aa3.41□□□□□ -1.86
COPB1-212ENST00000534771 GAS6Q14393 721 aa3.41□□□□□ -1.86
COPB1-212ENST00000534771 MKL2Q9ULH7 1088 aa3.41□□□□□ -1.86
COPB1-212ENST00000534771 UPP2O95045 317 aa3.4□□□□□ -1.87
COPB1-212ENST00000534771 ADH1CP00326 375 aa3.4□□□□□ -1.87
COPB1-212ENST00000534771 GATA4P43694 442 aa3.4□□□□□ -1.87
COPB1-212ENST00000534771 NKAPLQ5M9Q1 402 aa3.4□□□□□ -1.87
COPB1-212ENST00000534771 SUV39H2Q9H5I1 410 aa3.4□□□□□ -1.87
COPB1-212ENST00000534771 DYRK3O43781 588 aa3.39□□□□□ -1.87
COPB1-212ENST00000534771 MFSD10Q14728 455 aa3.39□□□□□ -1.87
COPB1-212ENST00000534771 MORN1Q5T089 497 aa3.39□□□□□ -1.87
COPB1-212ENST00000534771 BRICD5Q6PL45 260 aa3.39□□□□□ -1.87
COPB1-212ENST00000534771 TMEM134Q9H6X4 195 aa3.39□□□□□ -1.87
COPB1-212ENST00000534771 SLC27A5Q9Y2P5 690 aa3.39□□□□□ -1.87
COPB1-212ENST00000534771 SLC35F4A4IF30 521 aa3.38□□□□□ -1.87
COPB1-212ENST00000534771 MSS51Q4VC12 460 aa3.38□□□□□ -1.87
COPB1-212ENST00000534771 ACDQ96AP0 544 aa3.38□□□□□ -1.87
COPB1-212ENST00000534771 KLF16Q9BXK1 252 aaPredicted RBP3.38□□□□□ -1.87
COPB1-212ENST00000534771 ZFAND3Q9H8U3 227 aa3.38□□□□□ -1.87
COPB1-212ENST00000534771 RRAGCQ9HB90 399 aa3.38□□□□□ -1.87
COPB1-212ENST00000534771 IGF1RP08069 1367 aa3.38□□□□□ -1.87
COPB1-212ENST00000534771 TTLL8A6PVC2 850 aa3.36□□□□□ -1.87
COPB1-212ENST00000534771 KRTAP9-7A8MTY7 169 aa3.36□□□□□ -1.87
COPB1-212ENST00000534771 ZIC2O95409 532 aaPredicted RBP3.36□□□□□ -1.87
COPB1-212ENST00000534771 TAL1P17542 331 aaPredicted RBP3.36□□□□□ -1.87
COPB1-212ENST00000534771 HS6ST3Q8IZP7 471 aa3.36□□□□□ -1.87
COPB1-212ENST00000534771 LINC00528Q8N1L1 170 aa3.36□□□□□ -1.87
COPB1-212ENST00000534771 RYDENQ9NUL5 291 aaKnown RBP3.36□□□□□ -1.87
COPB1-212ENST00000534771 TLL2Q9Y6L7 1015 aa3.36□□□□□ -1.87
COPB1-212ENST00000534771 CHGAP10645 457 aaKnown RBP3.35□□□□□ -1.87
COPB1-212ENST00000534771 MMP16P51512 607 aa3.35□□□□□ -1.87
COPB1-212ENST00000534771 SALL2Q9Y467 1007 aaPredicted RBP3.35□□□□□ -1.87
COPB1-212ENST00000534771 PLEKHG3A1L390 1219 aa3.34□□□□□ -1.87
COPB1-212ENST00000534771 IRAK1P51617 712 aa3.34□□□□□ -1.87
COPB1-212ENST00000534771 RNF19BQ6ZMZ0 732 aa3.34□□□□□ -1.87
COPB1-212ENST00000534771 RIC3Q7Z5B4 369 aa3.34□□□□□ -1.87
COPB1-212ENST00000534771 ITPKCQ96DU7 683 aa3.34□□□□□ -1.87
COPB1-212ENST00000534771 MBIPQ9NS73 344 aa3.34□□□□□ -1.87
COPB1-212ENST00000534771 RCCD1A6NED2 376 aa3.33□□□□□ -1.88
COPB1-212ENST00000534771 GRXCR2A6NFK2 248 aa3.33□□□□□ -1.88
COPB1-212ENST00000534771 OIP5O43482 229 aa3.33□□□□□ -1.88
COPB1-212ENST00000534771 TPSG1Q9NRR2 321 aa3.33□□□□□ -1.88
COPB1-212ENST00000534771 ATP6V1AP38606 617 aa3.32□□□□□ -1.88
COPB1-212ENST00000534771 FUT2Q10981 343 aa3.32□□□□□ -1.88
COPB1-212ENST00000534771 NKX1-1Q15270 411 aaPredicted RBP3.32□□□□□ -1.88
COPB1-212ENST00000534771 FBLN7Q53RD9 439 aa3.32□□□□□ -1.88
COPB1-212ENST00000534771 RSPH4AQ5TD94 716 aa3.32□□□□□ -1.88
COPB1-212ENST00000534771 DNAJC5Q9H3Z4 198 aa3.32□□□□□ -1.88
COPB1-212ENST00000534771 NPDC1Q9NQX5 325 aaPredicted RBP3.32□□□□□ -1.88
COPB1-212ENST00000534771 LRRC4BQ9NT99 713 aa3.32□□□□□ -1.88
COPB1-212ENST00000534771 ELNP15502 786 aa3.31□□□□□ -1.88
COPB1-212ENST00000534771 LINC00114Q6XXX2 140 aa3.31□□□□□ -1.88
COPB1-212ENST00000534771 RBM46Q8TBY0 533 aaKnown RBP3.31□□□□□ -1.88
COPB1-212ENST00000534771 SHISA8B8ZZ34 492 aa3.3□□□□□ -1.88
COPB1-212ENST00000534771 SH3BP2P78314 561 aa3.3□□□□□ -1.88
COPB1-212ENST00000534771 GPR25O00155 361 aa3.29□□□□□ -1.88
COPB1-212ENST00000534771 DXOO77932 396 aaKnown RBP3.29□□□□□ -1.88
COPB1-212ENST00000534771 MEIOBQ8N635 442 aa3.29□□□□□ -1.88
COPB1-212ENST00000534771 CAMK2BQ13554 666 aa3.28□□□□□ -1.88
COPB1-212ENST00000534771 PTCRAQ6ISU1 281 aaPredicted RBP3.28□□□□□ -1.88
COPB1-212ENST00000534771 TSEN34Q9BSV6 310 aaKnown RBP3.28□□□□□ -1.88
COPB1-212ENST00000534771 CUEDC1Q9NWM3 386 aaPredicted RBP3.28□□□□□ -1.88
COPB1-212ENST00000534771 GTPBP6O43824 516 aaPredicted RBP3.27□□□□□ -1.89
COPB1-212ENST00000534771 OSBPP22059 807 aa3.27□□□□□ -1.89
COPB1-212ENST00000534771 GNB5O14775 395 aa3.26□□□□□ -1.89
COPB1-212ENST00000534771 PSPNO60542 156 aa3.26□□□□□ -1.89
COPB1-212ENST00000534771 MPNDQ8N594 471 aa3.26□□□□□ -1.89
COPB1-212ENST00000534771 PIK3R2O00459 728 aa3.25□□□□□ -1.89
COPB1-212ENST00000534771 FAM161AQ3B820 660 aa3.25□□□□□ -1.89
COPB1-212ENST00000534771 C1orf229Q6ZS94 237 aaPredicted RBP3.25□□□□□ -1.89
COPB1-212ENST00000534771 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
COPB1-212ENST00000534771 SENP3-EIF4A1A0A087X0R7 540 aa3.24□□□□□ -1.89
COPB1-212ENST00000534771 SPTLC1O15269 473 aa3.24□□□□□ -1.89
COPB1-212ENST00000534771 NR3C2P08235 984 aa3.24□□□□□ -1.89
COPB1-212ENST00000534771 VARSP26640 1264 aaKnown RBP3.24□□□□□ -1.89
COPB1-212ENST00000534771 ARID5BQ14865 1188 aa3.24□□□□□ -1.89
COPB1-212ENST00000534771 FOXR1Q6PIV2 292 aa3.24□□□□□ -1.89
COPB1-212ENST00000534771 OXCT2Q9BYC2 517 aaPredicted RBP3.24□□□□□ -1.89
COPB1-212ENST00000534771 C8AP07357 584 aa3.23□□□□□ -1.89
COPB1-212ENST00000534771 HOXB4P17483 251 aaPredicted RBP3.23□□□□□ -1.89
COPB1-212ENST00000534771 AMPD1P23109 780 aa3.23□□□□□ -1.89
COPB1-212ENST00000534771 PDIA6Q15084 440 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms