RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 TECPR2O15040 1411 aa11.77□□□□□ -0.53
SF3B2-216ENST00000534765 ATP7BP35670 1465 aa11.76□□□□□ -0.53
SF3B2-216ENST00000534765 PLEKHG1Q9ULL1 1385 aa11.76□□□□□ -0.53
SF3B2-216ENST00000534765 KIF20BQ96Q89 1820 aa11.76□□□□□ -0.53
SF3B2-216ENST00000534765 CDCA8Q53HL2 280 aa11.76□□□□□ -0.53
SF3B2-216ENST00000534765 ANKRD26Q9UPS8 1709 aa11.76□□□□□ -0.53
SF3B2-216ENST00000534765 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.75□□□□□ -0.53
SF3B2-216ENST00000534765 MTHFSP49914 203 aa11.75□□□□□ -0.53
SF3B2-216ENST00000534765 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
SF3B2-216ENST00000534765 XRN1Q8IZH2 1706 aaKnown RBP11.74□□□□□ -0.53
SF3B2-216ENST00000534765 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
SF3B2-216ENST00000534765 SMG6Q86US8 1419 aaKnown RBP11.74□□□□□ -0.53
SF3B2-216ENST00000534765 COL3A1P02461 1466 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-216ENST00000534765 WASLO00401 505 aaPredicted RBP11.74□□□□□ -0.53
SF3B2-216ENST00000534765 MAP2P11137 1827 aaKnown RBP11.74□□□□□ -0.53
SF3B2-216ENST00000534765 MON2Q7Z3U7 1717 aa11.73□□□□□ -0.53
SF3B2-216ENST00000534765 PPIP5K1Q6PFW1 1433 aa11.73□□□□□ -0.53
SF3B2-216ENST00000534765 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-216ENST00000534765 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
SF3B2-216ENST00000534765 NME9Q86XW9 330 aa11.73□□□□□ -0.53
SF3B2-216ENST00000534765 ZNF142P52746 1687 aaPredicted RBP11.73□□□□□ -0.53
SF3B2-216ENST00000534765 AMOTL2Q9Y2J4 779 aa11.73□□□□□ -0.53
SF3B2-216ENST00000534765 NRKQ7Z2Y5 1582 aa11.73□□□□□ -0.53
SF3B2-216ENST00000534765 ZNF521Q96K83 1311 aa11.73□□□□□ -0.53
SF3B2-216ENST00000534765 KCNA6P17658 529 aa11.72□□□□□ -0.53
SF3B2-216ENST00000534765 USP35Q9P2H5 1018 aa11.72□□□□□ -0.53
SF3B2-216ENST00000534765 NALCNQ8IZF0 1738 aa11.72□□□□□ -0.53
SF3B2-216ENST00000534765 MORC1Q86VD1 984 aa11.72□□□□□ -0.53
SF3B2-216ENST00000534765 RRP7AQ9Y3A4 280 aaKnown RBP11.71□□□□□ -0.53
SF3B2-216ENST00000534765 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
SF3B2-216ENST00000534765 MARF1Q9Y4F3 1742 aaKnown RBP11.7□□□□□ -0.54
SF3B2-216ENST00000534765 APAF1O14727 1248 aa11.7□□□□□ -0.54
SF3B2-216ENST00000534765 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.7□□□□□ -0.54
SF3B2-216ENST00000534765 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
SF3B2-216ENST00000534765 CHD2O14647 1828 aaKnown RBP11.7□□□□□ -0.54
SF3B2-216ENST00000534765 NFKBIBQ15653 356 aa11.7□□□□□ -0.54
SF3B2-216ENST00000534765 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
SF3B2-216ENST00000534765 FAM135BQ49AJ0 1406 aa11.7□□□□□ -0.54
SF3B2-216ENST00000534765 PLIN1O60240 522 aa11.7□□□□□ -0.54
SF3B2-216ENST00000534765 ADGRB2O60241 1585 aa11.7□□□□□ -0.54
SF3B2-216ENST00000534765 CDC42BPGQ6DT37 1551 aa11.69□□□□□ -0.54
SF3B2-216ENST00000534765 FAM43AQ8N2R8 423 aa11.69□□□□□ -0.54
SF3B2-216ENST00000534765 PHF23Q9BUL5 403 aaPredicted RBP11.69□□□□□ -0.54
SF3B2-216ENST00000534765 IQSEC2Q5JU85 1478 aa11.69□□□□□ -0.54
SF3B2-216ENST00000534765 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
SF3B2-216ENST00000534765 CGNL1Q0VF96 1302 aa11.68□□□□□ -0.54
SF3B2-216ENST00000534765 ITSN1Q15811 1721 aa11.68□□□□□ -0.54
SF3B2-216ENST00000534765 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
SF3B2-216ENST00000534765 POLR3AO14802 1390 aaPredicted RBP11.68□□□□□ -0.54
SF3B2-216ENST00000534765 DIP2AQ14689 1571 aa11.68□□□□□ -0.54
SF3B2-216ENST00000534765 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
SF3B2-216ENST00000534765 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
SF3B2-216ENST00000534765 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
SF3B2-216ENST00000534765 PUS7Q96PZ0 661 aaKnown RBP11.67□□□□□ -0.54
SF3B2-216ENST00000534765 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
SF3B2-216ENST00000534765 RGS3P49796 1198 aa11.67□□□□□ -0.54
SF3B2-216ENST00000534765 PDIA4P13667 645 aaKnown RBP11.66□□□□□ -0.54
SF3B2-216ENST00000534765 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
SF3B2-216ENST00000534765 DUSP27Q5VZP5 1158 aa11.66□□□□□ -0.54
SF3B2-216ENST00000534765 POLKQ9UBT6 870 aa11.66□□□□□ -0.54
SF3B2-216ENST00000534765 NEUROD2Q15784 382 aa11.65□□□□□ -0.54
SF3B2-216ENST00000534765 THEMISQ8N1K5 641 aaPredicted RBP11.65□□□□□ -0.54
SF3B2-216ENST00000534765 ACEP12821 1306 aa11.65□□□□□ -0.54
SF3B2-216ENST00000534765 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.55
SF3B2-216ENST00000534765 TBX22Q9Y458 520 aa11.65□□□□□ -0.55
SF3B2-216ENST00000534765 PIK3C2AO00443 1686 aa11.64□□□□□ -0.55
SF3B2-216ENST00000534765 PLEKHF1Q96S99 279 aa11.64□□□□□ -0.55
SF3B2-216ENST00000534765 SSH2Q76I76 1423 aa11.64□□□□□ -0.55
SF3B2-216ENST00000534765 HSPA2P54652 639 aa11.64□□□□□ -0.55
SF3B2-216ENST00000534765 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
SF3B2-216ENST00000534765 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
SF3B2-216ENST00000534765 WDR43Q15061 677 aaKnown RBP eCLIP11.63□□□□□ -0.55
SF3B2-216ENST00000534765 KDM4FA0A1W2PPD8 638 aa11.63□□□□□ -0.55
SF3B2-216ENST00000534765 FGD1P98174 961 aa11.63□□□□□ -0.55
SF3B2-216ENST00000534765 EID1Q9Y6B2 187 aa11.63□□□□□ -0.55
SF3B2-216ENST00000534765 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
SF3B2-216ENST00000534765 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
SF3B2-216ENST00000534765 PTCH1Q13635 1447 aa11.63□□□□□ -0.55
SF3B2-216ENST00000534765 RRP9O43818 475 aaKnown RBP11.62□□□□□ -0.55
SF3B2-216ENST00000534765 AAMPQ13685 434 aa11.62□□□□□ -0.55
SF3B2-216ENST00000534765 SETD1BQ9UPS6 1966 aaKnown RBP11.62□□□□□ -0.55
SF3B2-216ENST00000534765 FRAT2O75474 233 aaPredicted RBP11.62□□□□□ -0.55
SF3B2-216ENST00000534765 SIRT1Q96EB6 747 aa11.62□□□□□ -0.55
SF3B2-216ENST00000534765 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
SF3B2-216ENST00000534765 PNPLA6Q8IY17 1366 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 LRRC7Q96NW7 1537 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 SOX12O15370 315 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 NUTM2GQ5VZR2 741 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 PDE4AP27815 886 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 TCP11L2Q8N4U5 519 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 PHACTR3Q96KR7 559 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 TERF2IPQ9NYB0 399 aa11.61□□□□□ -0.55
SF3B2-216ENST00000534765 TNNQ9UQP3 1299 aa11.6□□□□□ -0.55
SF3B2-216ENST00000534765 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
SF3B2-216ENST00000534765 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
SF3B2-216ENST00000534765 WWC1Q8IX03 1113 aa11.6□□□□□ -0.55
SF3B2-216ENST00000534765 INSRP06213 1382 aa11.6□□□□□ -0.55
SF3B2-216ENST00000534765 USP6P35125 1406 aa11.6□□□□□ -0.55
SF3B2-216ENST00000534765 DLG5Q8TDM6 1919 aa11.6□□□□□ -0.55
SF3B2-216ENST00000534765 SLFN5Q08AF3 891 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms