RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 CENPJQ9HC77 1338 aaPredicted RBP27.15■■□□□ 1.94
NDUFS3-213ENST00000534716 ONECUT3O60422 494 aaPredicted RBP27.14■■□□□ 1.94
NDUFS3-213ENST00000534716 PLEKHG5O94827 1062 aa27.14■■□□□ 1.94
NDUFS3-213ENST00000534716 PAK3O75914 559 aaPredicted RBP27.13■■□□□ 1.93
NDUFS3-213ENST00000534716 NBPF8Q3BBV2 869 aa27.12■■□□□ 1.93
NDUFS3-213ENST00000534716 ACEP12821 1306 aa27.12■■□□□ 1.93
NDUFS3-213ENST00000534716 CRYBG1Q9Y4K1 1723 aa27.11■■□□□ 1.93
NDUFS3-213ENST00000534716 CCDC125Q86Z20 511 aa27.11■■□□□ 1.93
NDUFS3-213ENST00000534716 COL14A1Q05707 1796 aaKnown RBP27.09■■□□□ 1.93
NDUFS3-213ENST00000534716 BTG4Q9NY30 223 aa27.08■■□□□ 1.93
NDUFS3-213ENST00000534716 SEPT12Q8IYM1 358 aa27.07■■□□□ 1.92
NDUFS3-213ENST00000534716 TRPM1Q7Z4N2 1603 aa27.06■■□□□ 1.92
NDUFS3-213ENST00000534716 NEUROD1Q13562 356 aa27.06■■□□□ 1.92
NDUFS3-213ENST00000534716 NRAPQ86VF7 1730 aa27.06■■□□□ 1.92
NDUFS3-213ENST00000534716 SRPK2P78362 688 aaKnown RBP27.05■■□□□ 1.92
NDUFS3-213ENST00000534716 CCDC9Q9Y3X0 531 aaKnown RBP27.04■■□□□ 1.92
NDUFS3-213ENST00000534716 PPIP5K1Q6PFW1 1433 aa27.04■■□□□ 1.92
NDUFS3-213ENST00000534716 BRD4O60885 1362 aaPredicted RBP27.03■■□□□ 1.92
NDUFS3-213ENST00000534716 QRICH2Q9H0J4 1663 aa27.03■■□□□ 1.92
NDUFS3-213ENST00000534716 CABP2Q9NPB3 220 aa27.02■■□□□ 1.92
NDUFS3-213ENST00000534716 PRDM11Q9NQV5 511 aa27.02■■□□□ 1.92
NDUFS3-213ENST00000534716 ROCK2O75116 1388 aaKnown RBP27.01■■□□□ 1.91
NDUFS3-213ENST00000534716 PHRF1Q9P1Y6 1649 aaKnown RBP27■■□□□ 1.91
NDUFS3-213ENST00000534716 KIAA0232Q92628 1395 aa26.99■■□□□ 1.91
NDUFS3-213ENST00000534716 SPATA31A5Q5VU36 1347 aa26.99■■□□□ 1.91
NDUFS3-213ENST00000534716 SPATA31A7Q8IWB4 1347 aa26.99■■□□□ 1.91
NDUFS3-213ENST00000534716 BLMP54132 1417 aaPredicted RBP26.99■■□□□ 1.91
NDUFS3-213ENST00000534716 ABTB2Q8N961 1025 aa26.98■■□□□ 1.91
NDUFS3-213ENST00000534716 USP19O94966 1318 aa26.97■■□□□ 1.91
NDUFS3-213ENST00000534716 EVC2Q86UK5 1308 aa26.97■■□□□ 1.91
NDUFS3-213ENST00000534716 KRT27Q7Z3Y8 459 aa26.97■■□□□ 1.91
NDUFS3-213ENST00000534716 BRWD3Q6RI45 1802 aa26.97■■□□□ 1.91
NDUFS3-213ENST00000534716 NUTM2GQ5VZR2 741 aa26.96■■□□□ 1.91
NDUFS3-213ENST00000534716 CABP1Q9NZU7 370 aa26.96■■□□□ 1.91
NDUFS3-213ENST00000534716 FAM98CQ17RN3 349 aaKnown RBP26.95■■□□□ 1.9
NDUFS3-213ENST00000534716 CPDO75976 1380 aa26.95■■□□□ 1.9
NDUFS3-213ENST00000534716 ZC3H6P61129 1189 aaKnown RBP26.94■■□□□ 1.9
NDUFS3-213ENST00000534716 USP6P35125 1406 aa26.93■■□□□ 1.9
NDUFS3-213ENST00000534716 NLRP13Q86W25 1043 aa26.93■■□□□ 1.9
NDUFS3-213ENST00000534716 NRKQ7Z2Y5 1582 aa26.92■■□□□ 1.9
NDUFS3-213ENST00000534716 SRCAPQ6ZRS2 3230 aa26.92■■□□□ 1.9
NDUFS3-213ENST00000534716 CHRNA2Q15822 529 aa26.92■■□□□ 1.9
NDUFS3-213ENST00000534716 SSH2Q76I76 1423 aa26.91■■□□□ 1.9
NDUFS3-213ENST00000534716 SPATA31A1Q5TZJ5 1347 aa26.9■■□□□ 1.9
NDUFS3-213ENST00000534716 SBNO2Q9Y2G9 1366 aa26.89■■□□□ 1.9
NDUFS3-213ENST00000534716 GCP02774 474 aa26.89■■□□□ 1.9
NDUFS3-213ENST00000534716 THSD7AQ9UPZ6 1657 aa26.88■■□□□ 1.89
NDUFS3-213ENST00000534716 A0A0G2JS52 829 aa26.87■■□□□ 1.89
NDUFS3-213ENST00000534716 MYT1Q01538 1121 aa26.87■■□□□ 1.89
NDUFS3-213ENST00000534716 ZNF692Q9BU19 519 aaPredicted RBP26.86■■□□□ 1.89
NDUFS3-213ENST00000534716 ZRANB1Q9UGI0 708 aa26.86■■□□□ 1.89
NDUFS3-213ENST00000534716 LMO7Q8WWI1 1683 aa26.85■■□□□ 1.89
NDUFS3-213ENST00000534716 TRIM26Q12899 539 aaPredicted RBP26.85■■□□□ 1.89
NDUFS3-213ENST00000534716 CAMTA1Q9Y6Y1 1673 aa26.85■■□□□ 1.89
NDUFS3-213ENST00000534716 SF3B2Q13435 895 aaKnown RBP26.84■■□□□ 1.89
NDUFS3-213ENST00000534716 STRN4Q9NRL3 753 aa26.84■■□□□ 1.89
NDUFS3-213ENST00000534716 TONSLQ96HA7 1378 aa26.84■■□□□ 1.89
NDUFS3-213ENST00000534716 CARD11Q9BXL7 1154 aa26.83■■□□□ 1.89
NDUFS3-213ENST00000534716 SLIT3O75094 1523 aa26.83■■□□□ 1.89
NDUFS3-213ENST00000534716 EVA1CP58658 441 aa26.82■■□□□ 1.88
NDUFS3-213ENST00000534716 NLRP6P59044 892 aa26.82■■□□□ 1.88
NDUFS3-213ENST00000534716 BARGINQ6ZT62 677 aa26.82■■□□□ 1.88
NDUFS3-213ENST00000534716 CPSF1Q10570 1443 aaKnown RBP26.82■■□□□ 1.88
NDUFS3-213ENST00000534716 DEFB132Q7Z7B7 95 aa26.8■■□□□ 1.88
NDUFS3-213ENST00000534716 PIK3C2AO00443 1686 aa26.79■■□□□ 1.88
NDUFS3-213ENST00000534716 LARP1Q6PKG0 1096 aaKnown RBP26.78■■□□□ 1.88
NDUFS3-213ENST00000534716 TTC21BQ7Z4L5 1316 aa26.78■■□□□ 1.88
NDUFS3-213ENST00000534716 COL5A2P05997 1499 aaPredicted RBP26.77■■□□□ 1.88
NDUFS3-213ENST00000534716 AATKQ6ZMQ8 1374 aa26.77■■□□□ 1.88
NDUFS3-213ENST00000534716 TTC21AQ8NDW8 1320 aa26.77■■□□□ 1.88
NDUFS3-213ENST00000534716 THRAP3Q9Y2W1 955 aaKnown RBP26.77■■□□□ 1.88
NDUFS3-213ENST00000534716 TCP11L2Q8N4U5 519 aa26.75■■□□□ 1.87
NDUFS3-213ENST00000534716 AKAP12Q02952 1782 aa26.75■■□□□ 1.87
NDUFS3-213ENST00000534716 KTN1Q86UP2 1357 aaKnown RBP26.73■■□□□ 1.87
NDUFS3-213ENST00000534716 BAG6P46379 1132 aa26.73■■□□□ 1.87
NDUFS3-213ENST00000534716 FAM182BQ5T319 152 aa26.73■■□□□ 1.87
NDUFS3-213ENST00000534716 PUS7Q96PZ0 661 aaKnown RBP26.73■■□□□ 1.87
NDUFS3-213ENST00000534716 USP35Q9P2H5 1018 aa26.73■■□□□ 1.87
NDUFS3-213ENST00000534716 FAM196AQ6ZSG2 479 aa26.72■■□□□ 1.87
NDUFS3-213ENST00000534716 KCNH5Q8NCM2 988 aa26.72■■□□□ 1.87
NDUFS3-213ENST00000534716 DISP2A7MBM2 1401 aa26.72■■□□□ 1.87
NDUFS3-213ENST00000534716 CRB1P82279 1406 aa26.72■■□□□ 1.87
NDUFS3-213ENST00000534716 ARHGEF25Q86VW2 580 aa26.7■■□□□ 1.86
NDUFS3-213ENST00000534716 RGPD1P0DJD0 1748 aa26.7■■□□□ 1.86
NDUFS3-213ENST00000534716 CD163L1Q9NR16 1453 aa26.68■■□□□ 1.86
NDUFS3-213ENST00000534716 COL18A1P39060 1754 aa26.67■■□□□ 1.86
NDUFS3-213ENST00000534716 PDE3BQ13370 1112 aa26.67■■□□□ 1.86
NDUFS3-213ENST00000534716 MON2Q7Z3U7 1717 aa26.66■■□□□ 1.86
NDUFS3-213ENST00000534716 AXIN2Q9Y2T1 843 aa26.66■■□□□ 1.86
NDUFS3-213ENST00000534716 USP31Q70CQ4 1352 aa26.66■■□□□ 1.86
NDUFS3-213ENST00000534716 SLC24A1O60721 1099 aa26.65■■□□□ 1.86
NDUFS3-213ENST00000534716 TESK2Q96S53 571 aa26.64■■□□□ 1.86
NDUFS3-213ENST00000534716 NFAT5O94916 1531 aa26.64■■□□□ 1.85
NDUFS3-213ENST00000534716 TNS1Q9HBL0 1735 aaKnown RBP26.63■■□□□ 1.85
NDUFS3-213ENST00000534716 ZBTB7CA1YPR0 619 aa26.63■■□□□ 1.85
NDUFS3-213ENST00000534716 EN1Q05925 392 aaPredicted RBP26.63■■□□□ 1.85
NDUFS3-213ENST00000534716 WDR17Q8IZU2 1322 aa26.63■■□□□ 1.85
NDUFS3-213ENST00000534716 PARP4Q9UKK3 1724 aaKnown RBP26.62■■□□□ 1.85
NDUFS3-213ENST00000534716 SLC12A5Q9H2X9 1139 aa26.62■■□□□ 1.85
NDUFS3-213ENST00000534716 ABCC6O95255 1503 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms