RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 USP32Q8NFA0 1604 aa10.77□□□□□ -0.68
GEN1-207ENST00000534669 TMEM132EQ6IEE7 984 aa10.77□□□□□ -0.69
GEN1-207ENST00000534669 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.69
GEN1-207ENST00000534669 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
GEN1-207ENST00000534669 KIF1AQ12756 1690 aa10.76□□□□□ -0.69
GEN1-207ENST00000534669 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
GEN1-207ENST00000534669 RALGAPBQ86X10 1494 aa10.76□□□□□ -0.69
GEN1-207ENST00000534669 SLIT2O94813 1529 aa10.76□□□□□ -0.69
GEN1-207ENST00000534669 GJD4Q96KN9 370 aaPredicted RBP10.76□□□□□ -0.69
GEN1-207ENST00000534669 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
GEN1-207ENST00000534669 RGL3Q3MIN7 710 aa10.74□□□□□ -0.69
GEN1-207ENST00000534669 SPATA31A3Q5VYP0 1347 aa10.74□□□□□ -0.69
GEN1-207ENST00000534669 ABCC11Q96J66 1382 aa10.73□□□□□ -0.69
GEN1-207ENST00000534669 CCDC144AA2RUR9 1427 aa10.73□□□□□ -0.69
GEN1-207ENST00000534669 YTHDC2Q9H6S0 1430 aaKnown RBP10.73□□□□□ -0.69
GEN1-207ENST00000534669 DEFB132Q7Z7B7 95 aa10.72□□□□□ -0.69
GEN1-207ENST00000534669 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
GEN1-207ENST00000534669 CABLES1Q8TDN4 633 aa10.72□□□□□ -0.69
GEN1-207ENST00000534669 NWD2Q9ULI1 1742 aa10.72□□□□□ -0.69
GEN1-207ENST00000534669 NRAPQ86VF7 1730 aa10.71□□□□□ -0.69
GEN1-207ENST00000534669 TRPM3Q9HCF6 1732 aaPredicted RBP10.7□□□□□ -0.7
GEN1-207ENST00000534669 NRXN1Q9ULB1 1477 aa10.7□□□□□ -0.7
GEN1-207ENST00000534669 BLMP54132 1417 aaPredicted RBP10.7□□□□□ -0.7
GEN1-207ENST00000534669 TNS3Q68CZ2 1445 aa10.7□□□□□ -0.7
GEN1-207ENST00000534669 ANKRD30BQ9BXX2 1392 aa10.7□□□□□ -0.7
GEN1-207ENST00000534669 KRT28Q7Z3Y7 464 aa10.7□□□□□ -0.7
GEN1-207ENST00000534669 MPHOSPH9Q99550 1183 aa10.7□□□□□ -0.7
GEN1-207ENST00000534669 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
GEN1-207ENST00000534669 PHF12Q96QT6 1004 aa10.69□□□□□ -0.7
GEN1-207ENST00000534669 TSPYL2Q9H2G4 693 aaPredicted RBP10.69□□□□□ -0.7
GEN1-207ENST00000534669 CRYBG1Q9Y4K1 1723 aa10.68□□□□□ -0.7
GEN1-207ENST00000534669 CFAP70Q5T0N1 1121 aa10.68□□□□□ -0.7
GEN1-207ENST00000534669 CCDC125Q86Z20 511 aa10.68□□□□□ -0.7
GEN1-207ENST00000534669 SEPT12Q8IYM1 358 aa10.68□□□□□ -0.7
GEN1-207ENST00000534669 ALS2Q96Q42 1657 aa10.67□□□□□ -0.7
GEN1-207ENST00000534669 SAFB2Q14151 953 aaKnown RBP eCLIP10.67□□□□□ -0.7
GEN1-207ENST00000534669 VPS72Q15906 364 aa10.67□□□□□ -0.7
GEN1-207ENST00000534669 RASEFQ8IZ41 740 aa10.67□□□□□ -0.7
GEN1-207ENST00000534669 C14orf93Q9H972 538 aaKnown RBP10.67□□□□□ -0.7
GEN1-207ENST00000534669 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
GEN1-207ENST00000534669 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
GEN1-207ENST00000534669 LRP5O75197 1615 aa10.66□□□□□ -0.7
GEN1-207ENST00000534669 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
GEN1-207ENST00000534669 ADGRB2O60241 1585 aa10.66□□□□□ -0.7
GEN1-207ENST00000534669 SBNO1A3KN83 1393 aa10.65□□□□□ -0.7
GEN1-207ENST00000534669 FAM83GA6ND36 823 aa10.65□□□□□ -0.7
GEN1-207ENST00000534669 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
GEN1-207ENST00000534669 ONECUT3O60422 494 aaPredicted RBP10.65□□□□□ -0.7
GEN1-207ENST00000534669 NUBP1P53384 320 aa10.65□□□□□ -0.7
GEN1-207ENST00000534669 PMFBP1Q8TBY8 1022 aa10.65□□□□□ -0.7
GEN1-207ENST00000534669 SIRT1Q96EB6 747 aa10.65□□□□□ -0.7
GEN1-207ENST00000534669 PRAM1Q96QH2 718 aa10.65□□□□□ -0.7
GEN1-207ENST00000534669 DLC1Q96QB1 1528 aa10.64□□□□□ -0.71
GEN1-207ENST00000534669 TNS1Q9HBL0 1735 aaKnown RBP10.64□□□□□ -0.71
GEN1-207ENST00000534669 PRR36Q9H6K5 1346 aa10.63□□□□□ -0.71
GEN1-207ENST00000534669 COL14A1Q05707 1796 aaKnown RBP10.63□□□□□ -0.71
GEN1-207ENST00000534669 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
GEN1-207ENST00000534669 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
GEN1-207ENST00000534669 KRT27Q7Z3Y8 459 aa10.63□□□□□ -0.71
GEN1-207ENST00000534669 DCBLD2Q96PD2 775 aa10.63□□□□□ -0.71
GEN1-207ENST00000534669 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
GEN1-207ENST00000534669 DHX57Q6P158 1386 aaKnown RBP10.63□□□□□ -0.71
GEN1-207ENST00000534669 THSD7AQ9UPZ6 1657 aa10.63□□□□□ -0.71
GEN1-207ENST00000534669 RGPD1P0DJD0 1748 aa10.62□□□□□ -0.71
GEN1-207ENST00000534669 ANKARQ7Z5J8 1434 aa10.62□□□□□ -0.71
GEN1-207ENST00000534669 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
GEN1-207ENST00000534669 FAM182BQ5T319 152 aa10.62□□□□□ -0.71
GEN1-207ENST00000534669 ARHGEF10O15013 1369 aa10.62□□□□□ -0.71
GEN1-207ENST00000534669 POTEIP0CG38 1075 aa10.61□□□□□ -0.71
GEN1-207ENST00000534669 PSME1Q06323 249 aa10.61□□□□□ -0.71
GEN1-207ENST00000534669 FAM98CQ17RN3 349 aaKnown RBP10.61□□□□□ -0.71
GEN1-207ENST00000534669 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
GEN1-207ENST00000534669 TULP4Q9NRJ4 1543 aa10.6□□□□□ -0.71
GEN1-207ENST00000534669 PHRF1Q9P1Y6 1649 aaKnown RBP10.6□□□□□ -0.71
GEN1-207ENST00000534669 FAM212AQ96EL1 285 aa10.6□□□□□ -0.71
GEN1-207ENST00000534669 BTG4Q9NY30 223 aa10.6□□□□□ -0.71
GEN1-207ENST00000534669 ARHGEF28Q8N1W1 1705 aaKnown RBP10.6□□□□□ -0.71
GEN1-207ENST00000534669 MINK1Q8N4C8 1332 aaPredicted RBP10.59□□□□□ -0.71
GEN1-207ENST00000534669 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
GEN1-207ENST00000534669 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
GEN1-207ENST00000534669 ACIN1Q9UKV3 1341 aaKnown RBP10.58□□□□□ -0.71
GEN1-207ENST00000534669 A0A0G2JS52 829 aa10.58□□□□□ -0.72
GEN1-207ENST00000534669 HRCP23327 699 aa10.58□□□□□ -0.72
GEN1-207ENST00000534669 MYT1Q01538 1121 aa10.58□□□□□ -0.72
GEN1-207ENST00000534669 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
GEN1-207ENST00000534669 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
GEN1-207ENST00000534669 POGKQ9P215 609 aa10.58□□□□□ -0.72
GEN1-207ENST00000534669 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.72
GEN1-207ENST00000534669 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.72
GEN1-207ENST00000534669 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
GEN1-207ENST00000534669 MS4A3Q96HJ5 214 aa10.57□□□□□ -0.72
GEN1-207ENST00000534669 TOPAZ1Q8N9V7 1692 aa10.57□□□□□ -0.72
GEN1-207ENST00000534669 ATP7BP35670 1465 aa10.56□□□□□ -0.72
GEN1-207ENST00000534669 ITSN1Q15811 1721 aa10.56□□□□□ -0.72
GEN1-207ENST00000534669 RAB3GAP2Q9H2M9 1393 aa10.55□□□□□ -0.72
GEN1-207ENST00000534669 WASLO00401 505 aaPredicted RBP10.55□□□□□ -0.72
GEN1-207ENST00000534669 BAG6P46379 1132 aa10.55□□□□□ -0.72
GEN1-207ENST00000534669 GPRASP1Q5JY77 1395 aa10.54□□□□□ -0.72
GEN1-207ENST00000534669 KIAA0232Q92628 1395 aa10.54□□□□□ -0.72
GEN1-207ENST00000534669 RREB1Q92766 1687 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms