RNA–Protein interactions for RNA: ENST00000534640.1

AC090099.1-202, humanhuman

TSL 1 (best)

Gene AC090099.1, Length 2,074 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090099.1-202ENST00000534640 KIF20BQ96Q89 1820 aa12.79□□□□□ -0.36
AC090099.1-202ENST00000534640 STRCP1A6NGW2 1772 aa12.78□□□□□ -0.36
AC090099.1-202ENST00000534640 NUTM2FA1L443 756 aa12.78□□□□□ -0.36
AC090099.1-202ENST00000534640 ACEP12821 1306 aa12.78□□□□□ -0.36
AC090099.1-202ENST00000534640 RBM33Q96EV2 1170 aaKnown RBP12.77□□□□□ -0.36
AC090099.1-202ENST00000534640 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.36
AC090099.1-202ENST00000534640 PROSER2Q86WR7 435 aaPredicted RBP12.77□□□□□ -0.37
AC090099.1-202ENST00000534640 GGNBP2Q9H3C7 697 aa12.77□□□□□ -0.37
AC090099.1-202ENST00000534640 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
AC090099.1-202ENST00000534640 INSRP06213 1382 aa12.76□□□□□ -0.37
AC090099.1-202ENST00000534640 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
AC090099.1-202ENST00000534640 NRKQ7Z2Y5 1582 aa12.75□□□□□ -0.37
AC090099.1-202ENST00000534640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
AC090099.1-202ENST00000534640 USP6P35125 1406 aa12.75□□□□□ -0.37
AC090099.1-202ENST00000534640 SSH2Q76I76 1423 aa12.74□□□□□ -0.37
AC090099.1-202ENST00000534640 TNNT2P45379 298 aaPredicted RBP12.74□□□□□ -0.37
AC090099.1-202ENST00000534640 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
AC090099.1-202ENST00000534640 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
AC090099.1-202ENST00000534640 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
AC090099.1-202ENST00000534640 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
AC090099.1-202ENST00000534640 MTHFSP49914 203 aa12.72□□□□□ -0.37
AC090099.1-202ENST00000534640 NME9Q86XW9 330 aa12.72□□□□□ -0.37
AC090099.1-202ENST00000534640 NGDNQ8NEJ9 315 aaKnown RBP12.72□□□□□ -0.37
AC090099.1-202ENST00000534640 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
AC090099.1-202ENST00000534640 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.38
AC090099.1-202ENST00000534640 PHF8Q9UPP1 1060 aa12.71□□□□□ -0.38
AC090099.1-202ENST00000534640 DMRT2Q9Y5R5 561 aa12.71□□□□□ -0.38
AC090099.1-202ENST00000534640 ZBED9Q6R2W3 1325 aa12.71□□□□□ -0.38
AC090099.1-202ENST00000534640 TTC21AQ8NDW8 1320 aa12.71□□□□□ -0.38
AC090099.1-202ENST00000534640 DCCP43146 1447 aa12.71□□□□□ -0.38
AC090099.1-202ENST00000534640 MAP2P11137 1827 aaKnown RBP12.7□□□□□ -0.38
AC090099.1-202ENST00000534640 BLMP54132 1417 aaPredicted RBP12.7□□□□□ -0.38
AC090099.1-202ENST00000534640 XIRP1Q702N8 1843 aaKnown RBP12.7□□□□□ -0.38
AC090099.1-202ENST00000534640 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC090099.1-202ENST00000534640 COG3Q96JB2 828 aa12.69□□□□□ -0.38
AC090099.1-202ENST00000534640 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
AC090099.1-202ENST00000534640 ESCO1Q5FWF5 840 aa12.68□□□□□ -0.38
AC090099.1-202ENST00000534640 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
AC090099.1-202ENST00000534640 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
AC090099.1-202ENST00000534640 SHPRHQ149N8 1683 aa12.68□□□□□ -0.38
AC090099.1-202ENST00000534640 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
AC090099.1-202ENST00000534640 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
AC090099.1-202ENST00000534640 PNPLA6Q8IY17 1366 aa12.68□□□□□ -0.38
AC090099.1-202ENST00000534640 C1orf167Q5SNV9 1468 aa12.67□□□□□ -0.38
AC090099.1-202ENST00000534640 ZNF335Q9H4Z2 1342 aaPredicted RBP12.67□□□□□ -0.38
AC090099.1-202ENST00000534640 ATF3P18847 181 aa12.67□□□□□ -0.38
AC090099.1-202ENST00000534640 HOMEZQ8IX15 550 aa12.67□□□□□ -0.38
AC090099.1-202ENST00000534640 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
AC090099.1-202ENST00000534640 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
AC090099.1-202ENST00000534640 USP31Q70CQ4 1352 aa12.67□□□□□ -0.38
AC090099.1-202ENST00000534640 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
AC090099.1-202ENST00000534640 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
AC090099.1-202ENST00000534640 PIK3C2AO00443 1686 aa12.66□□□□□ -0.38
AC090099.1-202ENST00000534640 MST1RQ04912 1400 aa12.66□□□□□ -0.38
AC090099.1-202ENST00000534640 SMG6Q86US8 1419 aaKnown RBP12.66□□□□□ -0.38
AC090099.1-202ENST00000534640 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
AC090099.1-202ENST00000534640 MSH6P52701 1360 aa12.65□□□□□ -0.38
AC090099.1-202ENST00000534640 KIF1AQ12756 1690 aa12.65□□□□□ -0.38
AC090099.1-202ENST00000534640 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
AC090099.1-202ENST00000534640 FBLN1P23142 703 aa12.65□□□□□ -0.39
AC090099.1-202ENST00000534640 PSME1Q06323 249 aa12.64□□□□□ -0.39
AC090099.1-202ENST00000534640 HAP1P54257 671 aaPredicted RBP12.63□□□□□ -0.39
AC090099.1-202ENST00000534640 MARF1Q9Y4F3 1742 aaKnown RBP12.63□□□□□ -0.39
AC090099.1-202ENST00000534640 FOXO3O43524 673 aa12.62□□□□□ -0.39
AC090099.1-202ENST00000534640 CDK12Q9NYV4 1490 aaPredicted RBP12.62□□□□□ -0.39
AC090099.1-202ENST00000534640 NLRP6P59044 892 aa12.61□□□□□ -0.39
AC090099.1-202ENST00000534640 ABTB2Q8N961 1025 aa12.61□□□□□ -0.39
AC090099.1-202ENST00000534640 NUDCQ9Y266 331 aa12.61□□□□□ -0.39
AC090099.1-202ENST00000534640 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
AC090099.1-202ENST00000534640 DIAPH1O60610 1272 aaKnown RBP12.61□□□□□ -0.39
AC090099.1-202ENST00000534640 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
AC090099.1-202ENST00000534640 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
AC090099.1-202ENST00000534640 TRPM3Q9HCF6 1732 aaPredicted RBP12.6□□□□□ -0.39
AC090099.1-202ENST00000534640 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
AC090099.1-202ENST00000534640 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
AC090099.1-202ENST00000534640 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
AC090099.1-202ENST00000534640 SENP3-EIF4A1A0A087X0R7 540 aa12.58□□□□□ -0.39
AC090099.1-202ENST00000534640 CCDC146Q8IYE0 955 aa12.58□□□□□ -0.39
AC090099.1-202ENST00000534640 NGEFQ8N5V2 710 aa12.58□□□□□ -0.39
AC090099.1-202ENST00000534640 RUNDC1Q96C34 613 aa12.58□□□□□ -0.39
AC090099.1-202ENST00000534640 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
AC090099.1-202ENST00000534640 KRT28Q7Z3Y7 464 aa12.58□□□□□ -0.4
AC090099.1-202ENST00000534640 APAF1O14727 1248 aa12.57□□□□□ -0.4
AC090099.1-202ENST00000534640 IL13P35225 146 aa12.57□□□□□ -0.4
AC090099.1-202ENST00000534640 PEAK1Q9H792 1746 aa12.57□□□□□ -0.4
AC090099.1-202ENST00000534640 U2SURPO15042 1029 aaKnown RBP12.57□□□□□ -0.4
AC090099.1-202ENST00000534640 SLAIN2Q9P270 581 aa12.57□□□□□ -0.4
AC090099.1-202ENST00000534640 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
AC090099.1-202ENST00000534640 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
AC090099.1-202ENST00000534640 KIF24Q5T7B8 1368 aa12.56□□□□□ -0.4
AC090099.1-202ENST00000534640 XPCQ01831 940 aaPredicted RBP12.56□□□□□ -0.4
AC090099.1-202ENST00000534640 NUTM2GQ5VZR2 741 aa12.56□□□□□ -0.4
AC090099.1-202ENST00000534640 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
AC090099.1-202ENST00000534640 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
AC090099.1-202ENST00000534640 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
AC090099.1-202ENST00000534640 ALS2Q96Q42 1657 aa12.55□□□□□ -0.4
AC090099.1-202ENST00000534640 FCHSD2O94868 740 aa12.55□□□□□ -0.4
AC090099.1-202ENST00000534640 SBNO1A3KN83 1393 aa12.55□□□□□ -0.4
AC090099.1-202ENST00000534640 BRINP3Q76B58 766 aa12.55□□□□□ -0.4
AC090099.1-202ENST00000534640 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms