RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 PAK3O75914 559 aaPredicted RBP30.88■■■□□ 2.53
GSDMD-216ENST00000534602 NEUROD1Q13562 356 aa30.88■■■□□ 2.53
GSDMD-216ENST00000534602 GLI3P10071 1580 aa30.87■■■□□ 2.53
GSDMD-216ENST00000534602 ACEP12821 1306 aa30.85■■■□□ 2.53
GSDMD-216ENST00000534602 NBPF8Q3BBV2 869 aa30.84■■■□□ 2.53
GSDMD-216ENST00000534602 TRPM1Q7Z4N2 1603 aa30.84■■■□□ 2.53
GSDMD-216ENST00000534602 SRPK2P78362 688 aaKnown RBP30.82■■■□□ 2.52
GSDMD-216ENST00000534602 CRYBG1Q9Y4K1 1723 aa30.81■■■□□ 2.52
GSDMD-216ENST00000534602 COL14A1Q05707 1796 aaKnown RBP30.81■■■□□ 2.52
GSDMD-216ENST00000534602 QRICH2Q9H0J4 1663 aa30.81■■■□□ 2.52
GSDMD-216ENST00000534602 ONECUT3O60422 494 aaPredicted RBP30.8■■■□□ 2.52
GSDMD-216ENST00000534602 BTG4Q9NY30 223 aa30.78■■■□□ 2.52
GSDMD-216ENST00000534602 ROCK2O75116 1388 aaKnown RBP30.78■■■□□ 2.52
GSDMD-216ENST00000534602 PPIP5K1Q6PFW1 1433 aa30.77■■■□□ 2.52
GSDMD-216ENST00000534602 CCDC125Q86Z20 511 aa30.77■■■□□ 2.52
GSDMD-216ENST00000534602 CABP2Q9NPB3 220 aa30.77■■■□□ 2.52
GSDMD-216ENST00000534602 CCDC9Q9Y3X0 531 aaKnown RBP30.77■■■□□ 2.52
GSDMD-216ENST00000534602 NRAPQ86VF7 1730 aa30.76■■■□□ 2.51
GSDMD-216ENST00000534602 SEPT12Q8IYM1 358 aa30.75■■■□□ 2.51
GSDMD-216ENST00000534602 EP400Q96L91 3159 aa30.75■■■□□ 2.51
GSDMD-216ENST00000534602 BRD4O60885 1362 aaPredicted RBP30.75■■■□□ 2.51
GSDMD-216ENST00000534602 PRDM11Q9NQV5 511 aa30.74■■■□□ 2.51
GSDMD-216ENST00000534602 EVC2Q86UK5 1308 aa30.73■■■□□ 2.51
GSDMD-216ENST00000534602 TRIM26Q12899 539 aaPredicted RBP30.71■■■□□ 2.51
GSDMD-216ENST00000534602 PHRF1Q9P1Y6 1649 aaKnown RBP30.7■■■□□ 2.51
GSDMD-216ENST00000534602 ABTB2Q8N961 1025 aa30.7■■■□□ 2.51
GSDMD-216ENST00000534602 KIAA0232Q92628 1395 aa30.69■■■□□ 2.5
GSDMD-216ENST00000534602 BRWD3Q6RI45 1802 aa30.68■■■□□ 2.5
GSDMD-216ENST00000534602 NUTM2GQ5VZR2 741 aa30.68■■■□□ 2.5
GSDMD-216ENST00000534602 CABP1Q9NZU7 370 aa30.68■■■□□ 2.5
GSDMD-216ENST00000534602 USP19O94966 1318 aa30.66■■■□□ 2.5
GSDMD-216ENST00000534602 SPATA31A5Q5VU36 1347 aa30.66■■■□□ 2.5
GSDMD-216ENST00000534602 SPATA31A7Q8IWB4 1347 aa30.66■■■□□ 2.5
GSDMD-216ENST00000534602 NLRP13Q86W25 1043 aa30.65■■■□□ 2.5
GSDMD-216ENST00000534602 KRT27Q7Z3Y8 459 aa30.64■■■□□ 2.5
GSDMD-216ENST00000534602 TONSLQ96HA7 1378 aa30.64■■■□□ 2.5
GSDMD-216ENST00000534602 ZC3H6P61129 1189 aaKnown RBP30.63■■■□□ 2.49
GSDMD-216ENST00000534602 CPDO75976 1380 aa30.63■■■□□ 2.49
GSDMD-216ENST00000534602 USP6P35125 1406 aa30.63■■■□□ 2.49
GSDMD-216ENST00000534602 BLMP54132 1417 aaPredicted RBP30.63■■■□□ 2.49
GSDMD-216ENST00000534602 FAM98CQ17RN3 349 aaKnown RBP30.62■■■□□ 2.49
GSDMD-216ENST00000534602 CHRNA2Q15822 529 aa30.61■■■□□ 2.49
GSDMD-216ENST00000534602 SBNO2Q9Y2G9 1366 aa30.61■■■□□ 2.49
GSDMD-216ENST00000534602 NRKQ7Z2Y5 1582 aa30.61■■■□□ 2.49
GSDMD-216ENST00000534602 CARD11Q9BXL7 1154 aa30.59■■■□□ 2.49
GSDMD-216ENST00000534602 SSH2Q76I76 1423 aa30.58■■■□□ 2.49
GSDMD-216ENST00000534602 A0A0G2JS52 829 aa30.58■■■□□ 2.49
GSDMD-216ENST00000534602 GCP02774 474 aa30.58■■■□□ 2.49
GSDMD-216ENST00000534602 MYT1Q01538 1121 aa30.58■■■□□ 2.49
GSDMD-216ENST00000534602 ZNF692Q9BU19 519 aaPredicted RBP30.58■■■□□ 2.49
GSDMD-216ENST00000534602 SPATA31A1Q5TZJ5 1347 aa30.56■■■□□ 2.48
GSDMD-216ENST00000534602 STRN4Q9NRL3 753 aa30.54■■■□□ 2.48
GSDMD-216ENST00000534602 NLRP6P59044 892 aa30.53■■■□□ 2.48
GSDMD-216ENST00000534602 THSD7AQ9UPZ6 1657 aa30.52■■■□□ 2.48
GSDMD-216ENST00000534602 EVA1CP58658 441 aa30.52■■■□□ 2.48
GSDMD-216ENST00000534602 SF3B2Q13435 895 aaKnown RBP30.52■■■□□ 2.48
GSDMD-216ENST00000534602 LMO7Q8WWI1 1683 aa30.52■■■□□ 2.48
GSDMD-216ENST00000534602 CAMTA1Q9Y6Y1 1673 aa30.52■■■□□ 2.48
GSDMD-216ENST00000534602 SLIT3O75094 1523 aa30.5■■■□□ 2.47
GSDMD-216ENST00000534602 CPSF1Q10570 1443 aaKnown RBP30.49■■■□□ 2.47
GSDMD-216ENST00000534602 ZRANB1Q9UGI0 708 aa30.49■■■□□ 2.47
GSDMD-216ENST00000534602 AKAP12Q02952 1782 aa30.48■■■□□ 2.47
GSDMD-216ENST00000534602 TTC21BQ7Z4L5 1316 aa30.47■■■□□ 2.47
GSDMD-216ENST00000534602 TTC21AQ8NDW8 1320 aa30.47■■■□□ 2.47
GSDMD-216ENST00000534602 PIK3C2AO00443 1686 aa30.47■■■□□ 2.47
GSDMD-216ENST00000534602 BARGINQ6ZT62 677 aa30.47■■■□□ 2.47
GSDMD-216ENST00000534602 AATKQ6ZMQ8 1374 aa30.44■■■□□ 2.46
GSDMD-216ENST00000534602 LARP1Q6PKG0 1096 aaKnown RBP30.44■■■□□ 2.46
GSDMD-216ENST00000534602 KTN1Q86UP2 1357 aaKnown RBP30.43■■■□□ 2.46
GSDMD-216ENST00000534602 DEFB132Q7Z7B7 95 aa30.43■■■□□ 2.46
GSDMD-216ENST00000534602 PUS7Q96PZ0 661 aaKnown RBP30.43■■■□□ 2.46
GSDMD-216ENST00000534602 KCNH5Q8NCM2 988 aa30.42■■■□□ 2.46
GSDMD-216ENST00000534602 THRAP3Q9Y2W1 955 aaKnown RBP30.42■■■□□ 2.46
GSDMD-216ENST00000534602 COL5A2P05997 1499 aaPredicted RBP30.42■■■□□ 2.46
GSDMD-216ENST00000534602 TCP11L2Q8N4U5 519 aa30.41■■■□□ 2.46
GSDMD-216ENST00000534602 USP35Q9P2H5 1018 aa30.41■■■□□ 2.46
GSDMD-216ENST00000534602 SLC24A1O60721 1099 aa30.38■■■□□ 2.45
GSDMD-216ENST00000534602 BAG6P46379 1132 aa30.38■■■□□ 2.45
GSDMD-216ENST00000534602 MON2Q7Z3U7 1717 aa30.38■■■□□ 2.45
GSDMD-216ENST00000534602 FAM182BQ5T319 152 aa30.36■■■□□ 2.45
GSDMD-216ENST00000534602 FAM196AQ6ZSG2 479 aa30.36■■■□□ 2.45
GSDMD-216ENST00000534602 CRB1P82279 1406 aa30.36■■■□□ 2.45
GSDMD-216ENST00000534602 ARHGEF25Q86VW2 580 aa30.35■■■□□ 2.45
GSDMD-216ENST00000534602 CD163L1Q9NR16 1453 aa30.35■■■□□ 2.45
GSDMD-216ENST00000534602 RGPD1P0DJD0 1748 aa30.35■■■□□ 2.45
GSDMD-216ENST00000534602 COL18A1P39060 1754 aa30.34■■■□□ 2.45
GSDMD-216ENST00000534602 ZBTB7CA1YPR0 619 aa30.34■■■□□ 2.45
GSDMD-216ENST00000534602 TMC1Q8TDI8 760 aa30.34■■■□□ 2.45
GSDMD-216ENST00000534602 USP31Q70CQ4 1352 aa30.33■■■□□ 2.45
GSDMD-216ENST00000534602 PDE3BQ13370 1112 aa30.33■■■□□ 2.45
GSDMD-216ENST00000534602 HDGFL2Q7Z4V5 671 aaPredicted RBP30.33■■■□□ 2.45
GSDMD-216ENST00000534602 TESK2Q96S53 571 aa30.32■■■□□ 2.44
GSDMD-216ENST00000534602 SLC12A5Q9H2X9 1139 aa30.32■■■□□ 2.44
GSDMD-216ENST00000534602 ST20-MTHFSA0A0A6YYL1 179 aa30.31■■■□□ 2.44
GSDMD-216ENST00000534602 TERF2IPQ9NYB0 399 aa30.31■■■□□ 2.44
GSDMD-216ENST00000534602 DISP2A7MBM2 1401 aa30.3■■■□□ 2.44
GSDMD-216ENST00000534602 AXIN2Q9Y2T1 843 aa30.3■■■□□ 2.44
GSDMD-216ENST00000534602 NFAT5O94916 1531 aa30.29■■■□□ 2.44
GSDMD-216ENST00000534602 NINLQ9Y2I6 1382 aa30.28■■■□□ 2.44
GSDMD-216ENST00000534602 WDR17Q8IZU2 1322 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms