RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 PRDM11Q9NQV5 511 aa26.28■■□□□ 1.8
VPS51-215ENST00000534557 ACEP12821 1306 aa26.28■■□□□ 1.8
VPS51-215ENST00000534557 ATP7BP35670 1465 aa26.26■■□□□ 1.79
VPS51-215ENST00000534557 ONECUT3O60422 494 aaPredicted RBP26.26■■□□□ 1.79
VPS51-215ENST00000534557 SF3B2Q13435 895 aaKnown RBP26.26■■□□□ 1.79
VPS51-215ENST00000534557 SIN3AQ96ST3 1273 aa26.26■■□□□ 1.79
VPS51-215ENST00000534557 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
VPS51-215ENST00000534557 ABTB2Q8N961 1025 aa26.23■■□□□ 1.79
VPS51-215ENST00000534557 TRPM3Q9HCF6 1732 aaPredicted RBP26.22■■□□□ 1.79
VPS51-215ENST00000534557 NWD2Q9ULI1 1742 aa26.22■■□□□ 1.79
VPS51-215ENST00000534557 POLR3AO14802 1390 aaPredicted RBP26.22■■□□□ 1.79
VPS51-215ENST00000534557 KRT27Q7Z3Y8 459 aa26.22■■□□□ 1.79
VPS51-215ENST00000534557 ZRANB1Q9UGI0 708 aa26.22■■□□□ 1.79
VPS51-215ENST00000534557 GLI3P10071 1580 aa26.2■■□□□ 1.79
VPS51-215ENST00000534557 NUTM2GQ5VZR2 741 aa26.2■■□□□ 1.78
VPS51-215ENST00000534557 CABP2Q9NPB3 220 aa26.2■■□□□ 1.78
VPS51-215ENST00000534557 EVC2Q86UK5 1308 aa26.19■■□□□ 1.78
VPS51-215ENST00000534557 ALS2Q96Q42 1657 aa26.19■■□□□ 1.78
VPS51-215ENST00000534557 FAM98CQ17RN3 349 aaKnown RBP26.19■■□□□ 1.78
VPS51-215ENST00000534557 EVA1CP58658 441 aa26.18■■□□□ 1.78
VPS51-215ENST00000534557 NLRP13Q86W25 1043 aa26.18■■□□□ 1.78
VPS51-215ENST00000534557 ROCK2O75116 1388 aaKnown RBP26.18■■□□□ 1.78
VPS51-215ENST00000534557 ZC3H6P61129 1189 aaKnown RBP26.17■■□□□ 1.78
VPS51-215ENST00000534557 PLCH1Q4KWH8 1693 aa26.17■■□□□ 1.78
VPS51-215ENST00000534557 ABCA3Q99758 1704 aa26.17■■□□□ 1.78
VPS51-215ENST00000534557 BLMP54132 1417 aaPredicted RBP26.16■■□□□ 1.78
VPS51-215ENST00000534557 PPIP5K1Q6PFW1 1433 aa26.16■■□□□ 1.78
VPS51-215ENST00000534557 COL14A1Q05707 1796 aaKnown RBP26.16■■□□□ 1.78
VPS51-215ENST00000534557 BRD4O60885 1362 aaPredicted RBP26.16■■□□□ 1.78
VPS51-215ENST00000534557 KIAA0232Q92628 1395 aa26.15■■□□□ 1.78
VPS51-215ENST00000534557 SPATA31A5Q5VU36 1347 aa26.14■■□□□ 1.78
VPS51-215ENST00000534557 SPATA31A7Q8IWB4 1347 aa26.14■■□□□ 1.78
VPS51-215ENST00000534557 CHRNA2Q15822 529 aa26.14■■□□□ 1.78
VPS51-215ENST00000534557 CABP1Q9NZU7 370 aa26.14■■□□□ 1.78
VPS51-215ENST00000534557 STRN4Q9NRL3 753 aa26.13■■□□□ 1.77
VPS51-215ENST00000534557 ZNF692Q9BU19 519 aaPredicted RBP26.09■■□□□ 1.77
VPS51-215ENST00000534557 GCP02774 474 aa26.08■■□□□ 1.77
VPS51-215ENST00000534557 NLRP6P59044 892 aa26.08■■□□□ 1.77
VPS51-215ENST00000534557 TOPAZ1Q8N9V7 1692 aa26.06■■□□□ 1.76
VPS51-215ENST00000534557 BAG6P46379 1132 aa26.06■■□□□ 1.76
VPS51-215ENST00000534557 SPATA31A1Q5TZJ5 1347 aa26.06■■□□□ 1.76
VPS51-215ENST00000534557 TONSLQ96HA7 1378 aa26.05■■□□□ 1.76
VPS51-215ENST00000534557 QRICH2Q9H0J4 1663 aa26.04■■□□□ 1.76
VPS51-215ENST00000534557 DEFB132Q7Z7B7 95 aa26.04■■□□□ 1.76
VPS51-215ENST00000534557 CARD11Q9BXL7 1154 aa26.04■■□□□ 1.76
VPS51-215ENST00000534557 USP35Q9P2H5 1018 aa26.04■■□□□ 1.76
VPS51-215ENST00000534557 USP19O94966 1318 aa26.04■■□□□ 1.76
VPS51-215ENST00000534557 CPDO75976 1380 aa26.04■■□□□ 1.76
VPS51-215ENST00000534557 EP400Q96L91 3159 aa26.03■■□□□ 1.76
VPS51-215ENST00000534557 NRAPQ86VF7 1730 aa26.02■■□□□ 1.76
VPS51-215ENST00000534557 BRWD3Q6RI45 1802 aa26.02■■□□□ 1.76
VPS51-215ENST00000534557 USP6P35125 1406 aa26.01■■□□□ 1.75
VPS51-215ENST00000534557 TRIM26Q12899 539 aaPredicted RBP26.01■■□□□ 1.75
VPS51-215ENST00000534557 TRPM1Q7Z4N2 1603 aa26.01■■□□□ 1.75
VPS51-215ENST00000534557 ZBTB7CA1YPR0 619 aa26■■□□□ 1.75
VPS51-215ENST00000534557 PDE3BQ13370 1112 aa26■■□□□ 1.75
VPS51-215ENST00000534557 CRYBG1Q9Y4K1 1723 aa26■■□□□ 1.75
VPS51-215ENST00000534557 FAM196AQ6ZSG2 479 aa25.99■■□□□ 1.75
VPS51-215ENST00000534557 BARGINQ6ZT62 677 aa25.99■■□□□ 1.75
VPS51-215ENST00000534557 TCP11L2Q8N4U5 519 aa25.99■■□□□ 1.75
VPS51-215ENST00000534557 THRAP3Q9Y2W1 955 aaKnown RBP25.99■■□□□ 1.75
VPS51-215ENST00000534557 PHRF1Q9P1Y6 1649 aaKnown RBP25.98■■□□□ 1.75
VPS51-215ENST00000534557 LARP1Q6PKG0 1096 aaKnown RBP25.97■■□□□ 1.75
VPS51-215ENST00000534557 KCNH5Q8NCM2 988 aa25.97■■□□□ 1.75
VPS51-215ENST00000534557 SSH2Q76I76 1423 aa25.97■■□□□ 1.75
VPS51-215ENST00000534557 TTC21AQ8NDW8 1320 aa25.95■■□□□ 1.75
VPS51-215ENST00000534557 FAM182BQ5T319 152 aa25.95■■□□□ 1.74
VPS51-215ENST00000534557 TTC21BQ7Z4L5 1316 aa25.93■■□□□ 1.74
VPS51-215ENST00000534557 SLC24A1O60721 1099 aa25.93■■□□□ 1.74
VPS51-215ENST00000534557 KTN1Q86UP2 1357 aaKnown RBP25.92■■□□□ 1.74
VPS51-215ENST00000534557 SBNO2Q9Y2G9 1366 aa25.92■■□□□ 1.74
VPS51-215ENST00000534557 NRKQ7Z2Y5 1582 aa25.91■■□□□ 1.74
VPS51-215ENST00000534557 C11orf95C9JLR9 678 aaPredicted RBP25.91■■□□□ 1.74
VPS51-215ENST00000534557 TMC1Q8TDI8 760 aa25.91■■□□□ 1.74
VPS51-215ENST00000534557 AATKQ6ZMQ8 1374 aa25.91■■□□□ 1.74
VPS51-215ENST00000534557 CAMTA1Q9Y6Y1 1673 aa25.9■■□□□ 1.74
VPS51-215ENST00000534557 EN1Q05925 392 aaPredicted RBP25.89■■□□□ 1.74
VPS51-215ENST00000534557 TOM1L2Q6ZVM7 507 aa25.89■■□□□ 1.74
VPS51-215ENST00000534557 HDGFL2Q7Z4V5 671 aaPredicted RBP25.89■■□□□ 1.74
VPS51-215ENST00000534557 TRIM37O94972 964 aa25.87■■□□□ 1.73
VPS51-215ENST00000534557 THSD7AQ9UPZ6 1657 aa25.87■■□□□ 1.73
VPS51-215ENST00000534557 SOX12O15370 315 aa25.86■■□□□ 1.73
VPS51-215ENST00000534557 TERF2IPQ9NYB0 399 aa25.86■■□□□ 1.73
VPS51-215ENST00000534557 CRB1P82279 1406 aa25.86■■□□□ 1.73
VPS51-215ENST00000534557 APBA3O96018 575 aa25.85■■□□□ 1.73
VPS51-215ENST00000534557 PUS7Q96PZ0 661 aaKnown RBP25.85■■□□□ 1.73
VPS51-215ENST00000534557 COL5A2P05997 1499 aaPredicted RBP25.85■■□□□ 1.73
VPS51-215ENST00000534557 CSB-PGBD3P0DP91 1061 aa25.84■■□□□ 1.73
VPS51-215ENST00000534557 CPSF1Q10570 1443 aaKnown RBP25.84■■□□□ 1.73
VPS51-215ENST00000534557 ARHGEF25Q86VW2 580 aa25.84■■□□□ 1.73
VPS51-215ENST00000534557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.84■■□□□ 1.73
VPS51-215ENST00000534557 SLIT3O75094 1523 aa25.83■■□□□ 1.72
VPS51-215ENST00000534557 CDCA7Q9BWT1 371 aaPredicted RBP25.82■■□□□ 1.72
VPS51-215ENST00000534557 LMO7Q8WWI1 1683 aa25.81■■□□□ 1.72
VPS51-215ENST00000534557 DDB1Q16531 1140 aa25.8■■□□□ 1.72
VPS51-215ENST00000534557 SLC12A5Q9H2X9 1139 aa25.8■■□□□ 1.72
VPS51-215ENST00000534557 WDR17Q8IZU2 1322 aa25.8■■□□□ 1.72
VPS51-215ENST00000534557 RGPD1P0DJD0 1748 aa25.8■■□□□ 1.72
VPS51-215ENST00000534557 AXIN2Q9Y2T1 843 aa25.79■■□□□ 1.72
VPS51-215ENST00000534557 DISP2A7MBM2 1401 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms