RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CPSF1Q10570 1443 aaKnown RBP19.68■□□□□ 0.74
VPS11-205ENST00000534551 PAK3O75914 559 aaPredicted RBP19.67■□□□□ 0.74
VPS11-205ENST00000534551 TMF1P82094 1093 aa19.67■□□□□ 0.74
VPS11-205ENST00000534551 TMC1Q8TDI8 760 aa19.67■□□□□ 0.74
VPS11-205ENST00000534551 PLCH1Q4KWH8 1693 aa19.66■□□□□ 0.74
VPS11-205ENST00000534551 CABLES1Q8TDN4 633 aa19.66■□□□□ 0.74
VPS11-205ENST00000534551 SLC12A5Q9H2X9 1139 aa19.66■□□□□ 0.74
VPS11-205ENST00000534551 A0A1W2PP64 1363 aa19.66■□□□□ 0.74
VPS11-205ENST00000534551 SSH2Q76I76 1423 aa19.66■□□□□ 0.74
VPS11-205ENST00000534551 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
VPS11-205ENST00000534551 NUTM2GQ5VZR2 741 aa19.65■□□□□ 0.74
VPS11-205ENST00000534551 ARHGEF10O15013 1369 aa19.65■□□□□ 0.74
VPS11-205ENST00000534551 KIF20BQ96Q89 1820 aa19.63■□□□□ 0.73
VPS11-205ENST00000534551 USP54Q70EL1 1684 aa19.62■□□□□ 0.73
VPS11-205ENST00000534551 KTN1Q86UP2 1357 aaKnown RBP19.62■□□□□ 0.73
VPS11-205ENST00000534551 MEX3CQ5U5Q3 659 aaKnown RBP19.62■□□□□ 0.73
VPS11-205ENST00000534551 POLR3GLQ9BT43 218 aa19.62■□□□□ 0.73
VPS11-205ENST00000534551 C11orf95C9JLR9 678 aaPredicted RBP19.6■□□□□ 0.73
VPS11-205ENST00000534551 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
VPS11-205ENST00000534551 NRAPQ86VF7 1730 aa19.59■□□□□ 0.73
VPS11-205ENST00000534551 C8orf37Q96NL8 207 aa19.59■□□□□ 0.73
VPS11-205ENST00000534551 RGS17Q9UGC6 210 aaPredicted RBP19.59■□□□□ 0.73
VPS11-205ENST00000534551 NINLQ9Y2I6 1382 aa19.58■□□□□ 0.73
VPS11-205ENST00000534551 SLIT3O75094 1523 aa19.58■□□□□ 0.73
VPS11-205ENST00000534551 PUS7Q96PZ0 661 aaKnown RBP19.58■□□□□ 0.72
VPS11-205ENST00000534551 ANKRD36BQ8N2N9 1353 aa19.57■□□□□ 0.72
VPS11-205ENST00000534551 TTC21BQ7Z4L5 1316 aa19.57■□□□□ 0.72
VPS11-205ENST00000534551 ABTB2Q8N961 1025 aa19.57■□□□□ 0.72
VPS11-205ENST00000534551 EDC4Q6P2E9 1401 aaKnown RBP19.57■□□□□ 0.72
VPS11-205ENST00000534551 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.56■□□□□ 0.72
VPS11-205ENST00000534551 ZRANB1Q9UGI0 708 aa19.56■□□□□ 0.72
VPS11-205ENST00000534551 COL14A1Q05707 1796 aaKnown RBP19.56■□□□□ 0.72
VPS11-205ENST00000534551 AFF2P51816 1311 aa19.55■□□□□ 0.72
VPS11-205ENST00000534551 HAP1P54257 671 aaPredicted RBP19.55■□□□□ 0.72
VPS11-205ENST00000534551 HDGFL2Q7Z4V5 671 aaPredicted RBP19.55■□□□□ 0.72
VPS11-205ENST00000534551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.55■□□□□ 0.72
VPS11-205ENST00000534551 NWD2Q9ULI1 1742 aa19.55■□□□□ 0.72
VPS11-205ENST00000534551 BRD4O60885 1362 aaPredicted RBP19.55■□□□□ 0.72
VPS11-205ENST00000534551 LTN1O94822 1766 aa19.55■□□□□ 0.72
VPS11-205ENST00000534551 USP19O94966 1318 aa19.54■□□□□ 0.72
VPS11-205ENST00000534551 SLC24A1O60721 1099 aa19.54■□□□□ 0.72
VPS11-205ENST00000534551 NME9Q86XW9 330 aa19.54■□□□□ 0.72
VPS11-205ENST00000534551 RGPD5Q99666 1765 aa19.53■□□□□ 0.72
VPS11-205ENST00000534551 NFAT5O94916 1531 aa19.53■□□□□ 0.72
VPS11-205ENST00000534551 CDCA8Q53HL2 280 aa19.53■□□□□ 0.72
VPS11-205ENST00000534551 TERF2IPQ9NYB0 399 aa19.53■□□□□ 0.72
VPS11-205ENST00000534551 KIF7Q2M1P5 1343 aa19.52■□□□□ 0.72
VPS11-205ENST00000534551 ZNF692Q9BU19 519 aaPredicted RBP19.52■□□□□ 0.72
VPS11-205ENST00000534551 LMO7Q8WWI1 1683 aa19.52■□□□□ 0.71
VPS11-205ENST00000534551 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
VPS11-205ENST00000534551 NSD3Q9BZ95 1437 aa19.51■□□□□ 0.71
VPS11-205ENST00000534551 ANKRD26Q9UPS8 1709 aa19.51■□□□□ 0.71
VPS11-205ENST00000534551 SLIT2O94813 1529 aa19.51■□□□□ 0.71
VPS11-205ENST00000534551 OVOS2A0A0J9YW53 1432 aa19.51■□□□□ 0.71
VPS11-205ENST00000534551 OVOS2Q6IE36 1432 aa19.51■□□□□ 0.71
VPS11-205ENST00000534551 KIAA0232Q92628 1395 aa19.5■□□□□ 0.71
VPS11-205ENST00000534551 NLRP6P59044 892 aa19.5■□□□□ 0.71
VPS11-205ENST00000534551 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
VPS11-205ENST00000534551 COL18A1P39060 1754 aa19.49■□□□□ 0.71
VPS11-205ENST00000534551 SOX12O15370 315 aa19.49■□□□□ 0.71
VPS11-205ENST00000534551 NGLY1Q96IV0 654 aa19.49■□□□□ 0.71
VPS11-205ENST00000534551 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
VPS11-205ENST00000534551 ZC3H6P61129 1189 aaKnown RBP19.48■□□□□ 0.71
VPS11-205ENST00000534551 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
VPS11-205ENST00000534551 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
VPS11-205ENST00000534551 ILDR2Q71H61 639 aa19.47■□□□□ 0.71
VPS11-205ENST00000534551 NLRP13Q86W25 1043 aa19.47■□□□□ 0.71
VPS11-205ENST00000534551 CARD14Q9BXL6 1004 aa19.47■□□□□ 0.71
VPS11-205ENST00000534551 USP31Q70CQ4 1352 aa19.46■□□□□ 0.71
VPS11-205ENST00000534551 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
VPS11-205ENST00000534551 GLI3P10071 1580 aa19.45■□□□□ 0.7
VPS11-205ENST00000534551 FAM83GA6ND36 823 aa19.45■□□□□ 0.7
VPS11-205ENST00000534551 USP21Q9UK80 565 aa19.45■□□□□ 0.7
VPS11-205ENST00000534551 ATRNO75882 1429 aa19.44■□□□□ 0.7
VPS11-205ENST00000534551 CAMTA1Q9Y6Y1 1673 aa19.44■□□□□ 0.7
VPS11-205ENST00000534551 ZBTB7CA1YPR0 619 aa19.44■□□□□ 0.7
VPS11-205ENST00000534551 FNBP4Q8N3X1 1017 aaPredicted RBP19.44■□□□□ 0.7
VPS11-205ENST00000534551 PRDM11Q9NQV5 511 aa19.44■□□□□ 0.7
VPS11-205ENST00000534551 GCP02774 474 aa19.43■□□□□ 0.7
VPS11-205ENST00000534551 CPDO75976 1380 aa19.43■□□□□ 0.7
VPS11-205ENST00000534551 GGNBP2Q9H3C7 697 aa19.42■□□□□ 0.7
VPS11-205ENST00000534551 PANK3Q9H999 370 aa19.42■□□□□ 0.7
VPS11-205ENST00000534551 ZNF772Q68DY9 489 aaPredicted RBP19.41■□□□□ 0.7
VPS11-205ENST00000534551 PEAK1Q9H792 1746 aa19.4■□□□□ 0.7
VPS11-205ENST00000534551 BTG4Q9NY30 223 aa19.4■□□□□ 0.7
VPS11-205ENST00000534551 COL5A2P05997 1499 aaPredicted RBP19.39■□□□□ 0.69
VPS11-205ENST00000534551 WNK3Q9BYP7 1800 aa19.39■□□□□ 0.69
VPS11-205ENST00000534551 RGS12O14924 1447 aa19.38■□□□□ 0.69
VPS11-205ENST00000534551 FYB1O15117 783 aa19.38■□□□□ 0.69
VPS11-205ENST00000534551 FBLN1P23142 703 aa19.38■□□□□ 0.69
VPS11-205ENST00000534551 BRWD3Q6RI45 1802 aa19.37■□□□□ 0.69
VPS11-205ENST00000534551 RGPD2P0DJD1 1756 aa19.37■□□□□ 0.69
VPS11-205ENST00000534551 UNC5CLQ8IV45 518 aa19.37■□□□□ 0.69
VPS11-205ENST00000534551 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
VPS11-205ENST00000534551 ZEB1P37275 1124 aaPredicted RBP19.36■□□□□ 0.69
VPS11-205ENST00000534551 COG3Q96JB2 828 aa19.36■□□□□ 0.69
VPS11-205ENST00000534551 QTRT2Q9H974 415 aaKnown RBP19.36■□□□□ 0.69
VPS11-205ENST00000534551 ABCC6O95255 1503 aa19.35■□□□□ 0.69
VPS11-205ENST00000534551 STRN4Q9NRL3 753 aa19.35■□□□□ 0.69
VPS11-205ENST00000534551 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms