RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 CRYBG1Q9Y4K1 1723 aa30.21■■■□□ 2.43
PKP3-211ENST00000534401 SLC24A1O60721 1099 aa30.18■■■□□ 2.42
PKP3-211ENST00000534401 NGLY1Q96IV0 654 aa30.18■■■□□ 2.42
PKP3-211ENST00000534401 SSH2Q76I76 1423 aa30.18■■■□□ 2.42
PKP3-211ENST00000534401 USP47Q96K76 1375 aa30.17■■■□□ 2.42
PKP3-211ENST00000534401 CABLES1Q8TDN4 633 aa30.17■■■□□ 2.42
PKP3-211ENST00000534401 USP6P35125 1406 aa30.15■■■□□ 2.42
PKP3-211ENST00000534401 CPSF1Q10570 1443 aaKnown RBP30.15■■■□□ 2.42
PKP3-211ENST00000534401 LMOD2Q6P5Q4 547 aa30.15■■■□□ 2.42
PKP3-211ENST00000534401 AKAP12Q02952 1782 aa30.15■■■□□ 2.42
PKP3-211ENST00000534401 BCL9LQ86UU0 1499 aa30.13■■■□□ 2.41
PKP3-211ENST00000534401 SLIT2O94813 1529 aa30.13■■■□□ 2.41
PKP3-211ENST00000534401 PAK3O75914 559 aaPredicted RBP30.13■■■□□ 2.41
PKP3-211ENST00000534401 ZNF692Q9BU19 519 aaPredicted RBP30.13■■■□□ 2.41
PKP3-211ENST00000534401 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.09■■■□□ 2.41
PKP3-211ENST00000534401 QTRT2Q9H974 415 aaKnown RBP30.09■■■□□ 2.41
PKP3-211ENST00000534401 USP21Q9UK80 565 aa30.09■■■□□ 2.41
PKP3-211ENST00000534401 CD163L1Q9NR16 1453 aa30.08■■■□□ 2.41
PKP3-211ENST00000534401 ATRNO75882 1429 aa30.08■■■□□ 2.41
PKP3-211ENST00000534401 CDK12Q9NYV4 1490 aaPredicted RBP30.07■■■□□ 2.4
PKP3-211ENST00000534401 USP19O94966 1318 aa30.07■■■□□ 2.4
PKP3-211ENST00000534401 PHRF1Q9P1Y6 1649 aaKnown RBP30.06■■■□□ 2.4
PKP3-211ENST00000534401 NWD2Q9ULI1 1742 aa30.05■■■□□ 2.4
PKP3-211ENST00000534401 RXRBP28702 533 aa30.05■■■□□ 2.4
PKP3-211ENST00000534401 MON2Q7Z3U7 1717 aa30.05■■■□□ 2.4
PKP3-211ENST00000534401 NRKQ7Z2Y5 1582 aa30.04■■■□□ 2.4
PKP3-211ENST00000534401 FAM83GA6ND36 823 aa30.04■■■□□ 2.4
PKP3-211ENST00000534401 ABTB2Q8N961 1025 aa30.04■■■□□ 2.4
PKP3-211ENST00000534401 HAP1P54257 671 aaPredicted RBP30.03■■■□□ 2.4
PKP3-211ENST00000534401 RBM6P78332 1123 aaKnown RBP30.03■■■□□ 2.4
PKP3-211ENST00000534401 TRPC5Q9UL62 973 aaPredicted RBP30.03■■■□□ 2.4
PKP3-211ENST00000534401 TTC21BQ7Z4L5 1316 aa30.02■■■□□ 2.4
PKP3-211ENST00000534401 PLCH1Q4KWH8 1693 aa30.02■■■□□ 2.4
PKP3-211ENST00000534401 UNC5CLQ8IV45 518 aa30.02■■■□□ 2.4
PKP3-211ENST00000534401 SLC12A5Q9H2X9 1139 aa30.02■■■□□ 2.4
PKP3-211ENST00000534401 NINLQ9Y2I6 1382 aa30.02■■■□□ 2.4
PKP3-211ENST00000534401 NLRP13Q86W25 1043 aa30.01■■■□□ 2.39
PKP3-211ENST00000534401 PIK3C2AO00443 1686 aa30.01■■■□□ 2.39
PKP3-211ENST00000534401 COL14A1Q05707 1796 aaKnown RBP30■■■□□ 2.39
PKP3-211ENST00000534401 TMF1P82094 1093 aa30■■■□□ 2.39
PKP3-211ENST00000534401 TTC21AQ8NDW8 1320 aa29.99■■■□□ 2.39
PKP3-211ENST00000534401 NUTM2GQ5VZR2 741 aa29.99■■■□□ 2.39
PKP3-211ENST00000534401 KTN1Q86UP2 1357 aaKnown RBP29.99■■■□□ 2.39
PKP3-211ENST00000534401 SLIT3O75094 1523 aa29.97■■■□□ 2.39
PKP3-211ENST00000534401 PLEKHG5O94827 1062 aa29.97■■■□□ 2.39
PKP3-211ENST00000534401 CPDO75976 1380 aa29.96■■■□□ 2.39
PKP3-211ENST00000534401 NRAPQ86VF7 1730 aa29.96■■■□□ 2.39
PKP3-211ENST00000534401 GCP02774 474 aa29.94■■■□□ 2.38
PKP3-211ENST00000534401 TMC1Q8TDI8 760 aa29.94■■■□□ 2.38
PKP3-211ENST00000534401 USP54Q70EL1 1684 aa29.94■■■□□ 2.38
PKP3-211ENST00000534401 A0A1W2PP64 1363 aa29.93■■■□□ 2.38
PKP3-211ENST00000534401 KIAA0232Q92628 1395 aa29.93■■■□□ 2.38
PKP3-211ENST00000534401 NLRP6P59044 892 aa29.93■■■□□ 2.38
PKP3-211ENST00000534401 GJD4Q96KN9 370 aaPredicted RBP29.93■■■□□ 2.38
PKP3-211ENST00000534401 TERF2IPQ9NYB0 399 aa29.93■■■□□ 2.38
PKP3-211ENST00000534401 VPS72Q15906 364 aa29.92■■■□□ 2.38
PKP3-211ENST00000534401 CDCA8Q53HL2 280 aa29.92■■■□□ 2.38
PKP3-211ENST00000534401 EDC4Q6P2E9 1401 aaKnown RBP29.92■■■□□ 2.38
PKP3-211ENST00000534401 HDGFL2Q7Z4V5 671 aaPredicted RBP29.92■■■□□ 2.38
PKP3-211ENST00000534401 USP31Q70CQ4 1352 aa29.91■■■□□ 2.38
PKP3-211ENST00000534401 EIF4G2P78344 907 aaKnown RBP eCLIP29.91■■■□□ 2.38
PKP3-211ENST00000534401 GLI3P10071 1580 aa29.9■■■□□ 2.38
PKP3-211ENST00000534401 RGS12O14924 1447 aa29.9■■■□□ 2.38
PKP3-211ENST00000534401 PRDM11Q9NQV5 511 aa29.9■■■□□ 2.38
PKP3-211ENST00000534401 BTG4Q9NY30 223 aa29.89■■■□□ 2.38
PKP3-211ENST00000534401 ZC3H6P61129 1189 aaKnown RBP29.88■■■□□ 2.37
PKP3-211ENST00000534401 LMO7Q8WWI1 1683 aa29.88■■■□□ 2.37
PKP3-211ENST00000534401 HSPA5P11021 654 aaKnown RBP29.87■■■□□ 2.37
PKP3-211ENST00000534401 ANKRD36BQ8N2N9 1353 aa29.87■■■□□ 2.37
PKP3-211ENST00000534401 ONECUT3O60422 494 aaPredicted RBP29.85■■■□□ 2.37
PKP3-211ENST00000534401 MYOM1P52179 1685 aa29.84■■■□□ 2.37
PKP3-211ENST00000534401 CAMTA1Q9Y6Y1 1673 aa29.83■■■□□ 2.37
PKP3-211ENST00000534401 CHRNA2Q15822 529 aa29.83■■■□□ 2.37
PKP3-211ENST00000534401 COL18A1P39060 1754 aa29.82■■■□□ 2.36
PKP3-211ENST00000534401 NFAT5O94916 1531 aa29.81■■■□□ 2.36
PKP3-211ENST00000534401 NME9Q86XW9 330 aa29.81■■■□□ 2.36
PKP3-211ENST00000534401 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.81■■■□□ 2.36
PKP3-211ENST00000534401 KCNH5Q8NCM2 988 aa29.81■■■□□ 2.36
PKP3-211ENST00000534401 AATKQ6ZMQ8 1374 aa29.8■■■□□ 2.36
PKP3-211ENST00000534401 ZRANB1Q9UGI0 708 aa29.8■■■□□ 2.36
PKP3-211ENST00000534401 ARHGEF25Q86VW2 580 aa29.79■■■□□ 2.36
PKP3-211ENST00000534401 SPATA31A5Q5VU36 1347 aa29.78■■■□□ 2.36
PKP3-211ENST00000534401 SPATA31A7Q8IWB4 1347 aa29.78■■■□□ 2.36
PKP3-211ENST00000534401 OVOS2A0A0J9YW53 1432 aa29.78■■■□□ 2.36
PKP3-211ENST00000534401 OVOS2Q6IE36 1432 aa29.78■■■□□ 2.36
PKP3-211ENST00000534401 ABCC6O95255 1503 aa29.73■■■□□ 2.35
PKP3-211ENST00000534401 COL5A2P05997 1499 aaPredicted RBP29.72■■■□□ 2.35
PKP3-211ENST00000534401 SPATA31A1Q5TZJ5 1347 aa29.71■■■□□ 2.35
PKP3-211ENST00000534401 CARD14Q9BXL6 1004 aa29.71■■■□□ 2.35
PKP3-211ENST00000534401 BRWD3Q6RI45 1802 aa29.71■■■□□ 2.35
PKP3-211ENST00000534401 C11orf95C9JLR9 678 aaPredicted RBP29.69■■■□□ 2.34
PKP3-211ENST00000534401 FYB1O15117 783 aa29.69■■■□□ 2.34
PKP3-211ENST00000534401 AXIN2Q9Y2T1 843 aa29.69■■■□□ 2.34
PKP3-211ENST00000534401 CCDC9Q9Y3X0 531 aaKnown RBP29.69■■■□□ 2.34
PKP3-211ENST00000534401 SEPT12Q8IYM1 358 aa29.68■■■□□ 2.34
PKP3-211ENST00000534401 UPF1Q92900 1129 aaKnown RBP eCLIP29.68■■■□□ 2.34
PKP3-211ENST00000534401 THSD7AQ9UPZ6 1657 aa29.67■■■□□ 2.34
PKP3-211ENST00000534401 RGPD5Q99666 1765 aa29.67■■■□□ 2.34
PKP3-211ENST00000534401 LARP1Q6PKG0 1096 aaKnown RBP29.66■■■□□ 2.34
PKP3-211ENST00000534401 STRN4Q9NRL3 753 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms