RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 C1orf115Q9H7X2 142 aa21.02■□□□□ 0.95
PHRF1-206ENST00000534320 DDX49Q9Y6V7 483 aaKnown RBP21.02■□□□□ 0.95
PHRF1-206ENST00000534320 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
PHRF1-206ENST00000534320 ASXL2Q76L83 1435 aa21.01■□□□□ 0.95
PHRF1-206ENST00000534320 DISP1Q96F81 1524 aa21.01■□□□□ 0.95
PHRF1-206ENST00000534320 ZKSCAN1P17029 563 aaPredicted RBP21.01■□□□□ 0.95
PHRF1-206ENST00000534320 GCC1Q96CN9 775 aa21■□□□□ 0.95
PHRF1-206ENST00000534320 SLC4A2P04920 1241 aa21■□□□□ 0.95
PHRF1-206ENST00000534320 SKOR2Q2VWA4 1001 aaPredicted RBP21■□□□□ 0.95
PHRF1-206ENST00000534320 NFE2L2Q16236 605 aa21■□□□□ 0.95
PHRF1-206ENST00000534320 SETQ01105 290 aaPredicted RBP20.99■□□□□ 0.95
PHRF1-206ENST00000534320 BACH2Q9BYV9 841 aa20.99■□□□□ 0.95
PHRF1-206ENST00000534320 FRAT2O75474 233 aaPredicted RBP20.99■□□□□ 0.95
PHRF1-206ENST00000534320 TOMM22Q9NS69 142 aa20.99■□□□□ 0.95
PHRF1-206ENST00000534320 ERC2O15083 957 aa20.98■□□□□ 0.95
PHRF1-206ENST00000534320 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
PHRF1-206ENST00000534320 SHANK2Q9UPX8 1470 aa20.98■□□□□ 0.95
PHRF1-206ENST00000534320 NUP160Q12769 1436 aa20.98■□□□□ 0.95
PHRF1-206ENST00000534320 PRAG1Q86YV5 1406 aa20.98■□□□□ 0.95
PHRF1-206ENST00000534320 TRAPPC8Q9Y2L5 1435 aa20.98■□□□□ 0.95
PHRF1-206ENST00000534320 TULP1O00294 542 aaPredicted RBP20.98■□□□□ 0.95
PHRF1-206ENST00000534320 PHF14O94880 888 aa20.98■□□□□ 0.95
PHRF1-206ENST00000534320 LRRFIP1Q32MZ4 808 aaKnown RBP20.98■□□□□ 0.95
PHRF1-206ENST00000534320 SYTL4Q96C24 671 aaPredicted RBP20.98■□□□□ 0.95
PHRF1-206ENST00000534320 ATP6V1DQ9Y5K8 247 aa20.97■□□□□ 0.95
PHRF1-206ENST00000534320 ZNF428Q96B54 188 aa20.97■□□□□ 0.95
PHRF1-206ENST00000534320 WDR7Q9Y4E6 1490 aa20.97■□□□□ 0.95
PHRF1-206ENST00000534320 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
PHRF1-206ENST00000534320 TMX4Q9H1E5 349 aaPredicted RBP20.96■□□□□ 0.95
PHRF1-206ENST00000534320 CALRP27797 417 aaKnown RBP20.95■□□□□ 0.94
PHRF1-206ENST00000534320 HDGFL1Q5TGJ6 251 aa20.95■□□□□ 0.94
PHRF1-206ENST00000534320 FOXD4L6Q3SYB3 417 aaPredicted RBP20.94■□□□□ 0.94
PHRF1-206ENST00000534320 FOXD4L3Q6VB84 417 aaPredicted RBP20.94■□□□□ 0.94
PHRF1-206ENST00000534320 DNMT1P26358 1616 aaKnown RBP20.94■□□□□ 0.94
PHRF1-206ENST00000534320 H3BQV1 296 aa20.94■□□□□ 0.94
PHRF1-206ENST00000534320 GNAI2P04899 355 aa20.94■□□□□ 0.94
PHRF1-206ENST00000534320 IFFO2Q5TF58 517 aa20.94■□□□□ 0.94
PHRF1-206ENST00000534320 SURF6O75683 361 aaKnown RBP20.94■□□□□ 0.94
PHRF1-206ENST00000534320 FAM184AQ8NB25 1140 aa20.94■□□□□ 0.94
PHRF1-206ENST00000534320 A2MP01023 1474 aa20.93■□□□□ 0.94
PHRF1-206ENST00000534320 NOC3LQ8WTT2 800 aaKnown RBP20.93■□□□□ 0.94
PHRF1-206ENST00000534320 CHMP4CQ96CF2 233 aa20.93■□□□□ 0.94
PHRF1-206ENST00000534320 WASLO00401 505 aaPredicted RBP20.93■□□□□ 0.94
PHRF1-206ENST00000534320 NME9Q86XW9 330 aa20.93■□□□□ 0.94
PHRF1-206ENST00000534320 SAMD9Q5K651 1589 aa20.93■□□□□ 0.94
PHRF1-206ENST00000534320 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
PHRF1-206ENST00000534320 RNF20Q5VTR2 975 aa20.92■□□□□ 0.94
PHRF1-206ENST00000534320 NKTRP30414 1462 aaKnown RBP20.92■□□□□ 0.94
PHRF1-206ENST00000534320 ZNF530Q6P9A1 599 aaPredicted RBP20.92■□□□□ 0.94
PHRF1-206ENST00000534320 NSD2O96028 1365 aa20.92■□□□□ 0.94
PHRF1-206ENST00000534320 ZNF518AQ6AHZ1 1483 aa20.92■□□□□ 0.94
PHRF1-206ENST00000534320 RARSP54136 660 aaKnown RBP20.91■□□□□ 0.94
PHRF1-206ENST00000534320 ABCC11Q96J66 1382 aa20.91■□□□□ 0.94
PHRF1-206ENST00000534320 TATP17735 454 aaPredicted RBP20.91■□□□□ 0.94
PHRF1-206ENST00000534320 C20orf194Q5TEA3 1177 aa20.91■□□□□ 0.94
PHRF1-206ENST00000534320 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
PHRF1-206ENST00000534320 CLASRPQ8N2M8 674 aaKnown RBP20.9■□□□□ 0.94
PHRF1-206ENST00000534320 THUMPD2Q9BTF0 503 aaKnown RBP20.9■□□□□ 0.94
PHRF1-206ENST00000534320 SF3A1Q15459 793 aaKnown RBP20.89■□□□□ 0.94
PHRF1-206ENST00000534320 NUCB2P80303 420 aa20.89■□□□□ 0.93
PHRF1-206ENST00000534320 PZPP20742 1482 aa20.89■□□□□ 0.93
PHRF1-206ENST00000534320 DUSP27Q5VZP5 1158 aa20.89■□□□□ 0.93
PHRF1-206ENST00000534320 CCDC34Q96HJ3 373 aa20.89■□□□□ 0.93
PHRF1-206ENST00000534320 ZNF771Q7L3S4 317 aaPredicted RBP20.89■□□□□ 0.93
PHRF1-206ENST00000534320 EMILIN1Q9Y6C2 1016 aa20.89■□□□□ 0.93
PHRF1-206ENST00000534320 TPM4P67936 248 aa20.88■□□□□ 0.93
PHRF1-206ENST00000534320 TMEM57Q8N5G2 664 aa20.88■□□□□ 0.93
PHRF1-206ENST00000534320 CNTROBQ8N137 903 aa20.87■□□□□ 0.93
PHRF1-206ENST00000534320 PKNOX2Q96KN3 472 aa20.87■□□□□ 0.93
PHRF1-206ENST00000534320 NEUROD6Q96NK8 337 aa20.86■□□□□ 0.93
PHRF1-206ENST00000534320 CHD1LQ86WJ1 897 aa20.86■□□□□ 0.93
PHRF1-206ENST00000534320 SSH1Q8WYL5 1049 aa20.86■□□□□ 0.93
PHRF1-206ENST00000534320 ABCC2Q92887 1545 aa20.86■□□□□ 0.93
PHRF1-206ENST00000534320 AMOTL2Q9Y2J4 779 aa20.86■□□□□ 0.93
PHRF1-206ENST00000534320 ARHGEF12Q9NZN5 1544 aa20.85■□□□□ 0.93
PHRF1-206ENST00000534320 IFT57Q9NWB7 429 aa20.85■□□□□ 0.93
PHRF1-206ENST00000534320 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
PHRF1-206ENST00000534320 SRCIN1Q9C0H9 1055 aa20.85■□□□□ 0.93
PHRF1-206ENST00000534320 G3V3G9 751 aa20.84■□□□□ 0.93
PHRF1-206ENST00000534320 DCAF8Q5TAQ9 597 aa20.84■□□□□ 0.93
PHRF1-206ENST00000534320 ADGRL2O95490 1459 aa20.83■□□□□ 0.93
PHRF1-206ENST00000534320 TESK2Q96S53 571 aa20.83■□□□□ 0.93
PHRF1-206ENST00000534320 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
PHRF1-206ENST00000534320 MCM10Q7L590 875 aa20.83■□□□□ 0.93
PHRF1-206ENST00000534320 SMC3Q9UQE7 1217 aa20.83■□□□□ 0.93
PHRF1-206ENST00000534320 GNAT3A8MTJ3 354 aa20.83■□□□□ 0.92
PHRF1-206ENST00000534320 XPCQ01831 940 aaPredicted RBP20.83■□□□□ 0.92
PHRF1-206ENST00000534320 ABCC10Q5T3U5 1492 aa20.83■□□□□ 0.92
PHRF1-206ENST00000534320 PARD3Q8TEW0 1356 aa20.83■□□□□ 0.92
PHRF1-206ENST00000534320 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.92
PHRF1-206ENST00000534320 APPP05067 770 aa20.82■□□□□ 0.92
PHRF1-206ENST00000534320 DCTN1Q14203 1278 aa20.82■□□□□ 0.92
PHRF1-206ENST00000534320 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
PHRF1-206ENST00000534320 MCTP1Q6DN14 999 aa20.82■□□□□ 0.92
PHRF1-206ENST00000534320 LRPPRCP42704 1394 aaKnown RBP20.82■□□□□ 0.92
PHRF1-206ENST00000534320 CPLX2Q6PUV4 134 aaKnown RBP20.82■□□□□ 0.92
PHRF1-206ENST00000534320 KCNH5Q8NCM2 988 aa20.82■□□□□ 0.92
PHRF1-206ENST00000534320 SPG7Q9UQ90 795 aa20.82■□□□□ 0.92
PHRF1-206ENST00000534320 LRRCC1Q9C099 1032 aa20.81■□□□□ 0.92
PHRF1-206ENST00000534320 ANKRD36BQ8N2N9 1353 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms