RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
SF3B2-215ENST00000534307 CENPJQ9HC77 1338 aaPredicted RBP20.24■□□□□ 0.83
SF3B2-215ENST00000534307 CRYBG1Q9Y4K1 1723 aa20.23■□□□□ 0.83
SF3B2-215ENST00000534307 CABLES1Q8TDN4 633 aa20.22■□□□□ 0.83
SF3B2-215ENST00000534307 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
SF3B2-215ENST00000534307 NGDNQ8NEJ9 315 aaKnown RBP20.21■□□□□ 0.83
SF3B2-215ENST00000534307 UNC5CLQ8IV45 518 aa20.2■□□□□ 0.82
SF3B2-215ENST00000534307 CCDC61Q9Y6R9 512 aa20.2■□□□□ 0.82
SF3B2-215ENST00000534307 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
SF3B2-215ENST00000534307 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
SF3B2-215ENST00000534307 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
SF3B2-215ENST00000534307 ROCK2O75116 1388 aaKnown RBP20.19■□□□□ 0.82
SF3B2-215ENST00000534307 NRAPQ86VF7 1730 aa20.17■□□□□ 0.82
SF3B2-215ENST00000534307 ACEP12821 1306 aa20.16■□□□□ 0.82
SF3B2-215ENST00000534307 RGPD1P0DJD0 1748 aa20.16■□□□□ 0.82
SF3B2-215ENST00000534307 HAP1P54257 671 aaPredicted RBP20.15■□□□□ 0.82
SF3B2-215ENST00000534307 PPIP5K1Q6PFW1 1433 aa20.14■□□□□ 0.81
SF3B2-215ENST00000534307 PLEKHG5O94827 1062 aa20.14■□□□□ 0.81
SF3B2-215ENST00000534307 SEPT12Q8IYM1 358 aa20.14■□□□□ 0.81
SF3B2-215ENST00000534307 PHRF1Q9P1Y6 1649 aaKnown RBP20.13■□□□□ 0.81
SF3B2-215ENST00000534307 FAM83GA6ND36 823 aa20.13■□□□□ 0.81
SF3B2-215ENST00000534307 SRPK2P78362 688 aaKnown RBP20.13■□□□□ 0.81
SF3B2-215ENST00000534307 CABP2Q9NPB3 220 aa20.13■□□□□ 0.81
SF3B2-215ENST00000534307 COL14A1Q05707 1796 aaKnown RBP20.13■□□□□ 0.81
SF3B2-215ENST00000534307 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
SF3B2-215ENST00000534307 TONSLQ96HA7 1378 aa20.12■□□□□ 0.81
SF3B2-215ENST00000534307 PAK3O75914 559 aaPredicted RBP20.12■□□□□ 0.81
SF3B2-215ENST00000534307 SF3B2Q13435 895 aaKnown RBP20.12■□□□□ 0.81
SF3B2-215ENST00000534307 PSDA5PKW4 1024 aaPredicted RBP20.11■□□□□ 0.81
SF3B2-215ENST00000534307 VPS72Q15906 364 aa20.1■□□□□ 0.81
SF3B2-215ENST00000534307 SBNO2Q9Y2G9 1366 aa20.09■□□□□ 0.81
SF3B2-215ENST00000534307 EVC2Q86UK5 1308 aa20.09■□□□□ 0.81
SF3B2-215ENST00000534307 ONECUT3O60422 494 aaPredicted RBP20.08■□□□□ 0.81
SF3B2-215ENST00000534307 KRT27Q7Z3Y8 459 aa20.07■□□□□ 0.8
SF3B2-215ENST00000534307 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
SF3B2-215ENST00000534307 BRD4O60885 1362 aaPredicted RBP20.07■□□□□ 0.8
SF3B2-215ENST00000534307 USP6P35125 1406 aa20.06■□□□□ 0.8
SF3B2-215ENST00000534307 SSH2Q76I76 1423 aa20.06■□□□□ 0.8
SF3B2-215ENST00000534307 CABP1Q9NZU7 370 aa20.06■□□□□ 0.8
SF3B2-215ENST00000534307 USP19O94966 1318 aa20.05■□□□□ 0.8
SF3B2-215ENST00000534307 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
SF3B2-215ENST00000534307 BTG4Q9NY30 223 aa20.04■□□□□ 0.8
SF3B2-215ENST00000534307 KIAA0232Q92628 1395 aa20.04■□□□□ 0.8
SF3B2-215ENST00000534307 THSD7AQ9UPZ6 1657 aa20.03■□□□□ 0.8
SF3B2-215ENST00000534307 BAG6P46379 1132 aa20.03■□□□□ 0.8
SF3B2-215ENST00000534307 NUTM2GQ5VZR2 741 aa20.03■□□□□ 0.8
SF3B2-215ENST00000534307 AKAP12Q02952 1782 aa20.03■□□□□ 0.8
SF3B2-215ENST00000534307 ABTB2Q8N961 1025 aa20.02■□□□□ 0.8
SF3B2-215ENST00000534307 PRDM11Q9NQV5 511 aa20.02■□□□□ 0.8
SF3B2-215ENST00000534307 PIK3C2AO00443 1686 aa20.01■□□□□ 0.79
SF3B2-215ENST00000534307 CCDC9Q9Y3X0 531 aaKnown RBP20.01■□□□□ 0.79
SF3B2-215ENST00000534307 CPDO75976 1380 aa20■□□□□ 0.79
SF3B2-215ENST00000534307 DISP2A7MBM2 1401 aa20■□□□□ 0.79
SF3B2-215ENST00000534307 CPSF1Q10570 1443 aaKnown RBP20■□□□□ 0.79
SF3B2-215ENST00000534307 LMO7Q8WWI1 1683 aa20■□□□□ 0.79
SF3B2-215ENST00000534307 SLIT3O75094 1523 aa19.99■□□□□ 0.79
SF3B2-215ENST00000534307 RREB1Q92766 1687 aa19.98■□□□□ 0.79
SF3B2-215ENST00000534307 ZC3H6P61129 1189 aaKnown RBP19.98■□□□□ 0.79
SF3B2-215ENST00000534307 SPATA31A5Q5VU36 1347 aa19.98■□□□□ 0.79
SF3B2-215ENST00000534307 SPATA31A7Q8IWB4 1347 aa19.98■□□□□ 0.79
SF3B2-215ENST00000534307 EN1Q05925 392 aaPredicted RBP19.97■□□□□ 0.79
SF3B2-215ENST00000534307 CHRNA2Q15822 529 aa19.97■□□□□ 0.79
SF3B2-215ENST00000534307 NLRP13Q86W25 1043 aa19.97■□□□□ 0.79
SF3B2-215ENST00000534307 MON2Q7Z3U7 1717 aa19.96■□□□□ 0.79
SF3B2-215ENST00000534307 GCP02774 474 aa19.96■□□□□ 0.79
SF3B2-215ENST00000534307 R3HDM1Q15032 1099 aaKnown RBP19.96■□□□□ 0.79
SF3B2-215ENST00000534307 FAM98CQ17RN3 349 aaKnown RBP19.96■□□□□ 0.79
SF3B2-215ENST00000534307 CAMTA1Q9Y6Y1 1673 aa19.96■□□□□ 0.79
SF3B2-215ENST00000534307 CD163L1Q9NR16 1453 aa19.95■□□□□ 0.78
SF3B2-215ENST00000534307 A0A0G2JS52 829 aa19.95■□□□□ 0.78
SF3B2-215ENST00000534307 MYT1Q01538 1121 aa19.95■□□□□ 0.78
SF3B2-215ENST00000534307 ZNF692Q9BU19 519 aaPredicted RBP19.95■□□□□ 0.78
SF3B2-215ENST00000534307 NUP188Q5SRE5 1749 aa19.95■□□□□ 0.78
SF3B2-215ENST00000534307 TESK2Q96S53 571 aa19.93■□□□□ 0.78
SF3B2-215ENST00000534307 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
SF3B2-215ENST00000534307 NLRP6P59044 892 aa19.92■□□□□ 0.78
SF3B2-215ENST00000534307 FAM182BQ5T319 152 aa19.92■□□□□ 0.78
SF3B2-215ENST00000534307 SPATA31A1Q5TZJ5 1347 aa19.92■□□□□ 0.78
SF3B2-215ENST00000534307 CLSPNQ9HAW4 1339 aa19.92■□□□□ 0.78
SF3B2-215ENST00000534307 UTRNP46939 3433 aa19.91■□□□□ 0.78
SF3B2-215ENST00000534307 PUS7Q96PZ0 661 aaKnown RBP19.91■□□□□ 0.78
SF3B2-215ENST00000534307 TTC21AQ8NDW8 1320 aa19.91■□□□□ 0.78
SF3B2-215ENST00000534307 KTN1Q86UP2 1357 aaKnown RBP19.91■□□□□ 0.78
SF3B2-215ENST00000534307 USP54Q70EL1 1684 aa19.9■□□□□ 0.78
SF3B2-215ENST00000534307 COL18A1P39060 1754 aa19.9■□□□□ 0.78
SF3B2-215ENST00000534307 ST20-MTHFSA0A0A6YYL1 179 aa19.89■□□□□ 0.77
SF3B2-215ENST00000534307 COL5A2P05997 1499 aaPredicted RBP19.89■□□□□ 0.77
SF3B2-215ENST00000534307 STRN4Q9NRL3 753 aa19.89■□□□□ 0.77
SF3B2-215ENST00000534307 EZH2Q15910 746 aaKnown RBP19.88■□□□□ 0.77
SF3B2-215ENST00000534307 NFAT5O94916 1531 aa19.87■□□□□ 0.77
SF3B2-215ENST00000534307 AATKQ6ZMQ8 1374 aa19.87■□□□□ 0.77
SF3B2-215ENST00000534307 TIMELESSQ9UNS1 1208 aa19.87■□□□□ 0.77
SF3B2-215ENST00000534307 LARP1Q6PKG0 1096 aaKnown RBP19.86■□□□□ 0.77
SF3B2-215ENST00000534307 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
SF3B2-215ENST00000534307 SLC12A5Q9H2X9 1139 aa19.86■□□□□ 0.77
SF3B2-215ENST00000534307 USP31Q70CQ4 1352 aa19.85■□□□□ 0.77
SF3B2-215ENST00000534307 USP47Q96K76 1375 aa19.85■□□□□ 0.77
SF3B2-215ENST00000534307 EVA1CP58658 441 aa19.84■□□□□ 0.77
SF3B2-215ENST00000534307 BARGINQ6ZT62 677 aa19.84■□□□□ 0.77
SF3B2-215ENST00000534307 CAMKK2Q96RR4 588 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms