RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 ALS2Q96Q42 1657 aa26.89■■□□□ 1.89
PACS1-215ENST00000534273 CCER1Q8TC90 406 aaPredicted RBP26.88■■□□□ 1.89
PACS1-215ENST00000534273 BCL9LQ86UU0 1499 aa26.86■■□□□ 1.89
PACS1-215ENST00000534273 RBM6P78332 1123 aaKnown RBP26.85■■□□□ 1.89
PACS1-215ENST00000534273 TRPC5Q9UL62 973 aaPredicted RBP26.85■■□□□ 1.89
PACS1-215ENST00000534273 MARF1Q9Y4F3 1742 aaKnown RBP26.83■■□□□ 1.89
PACS1-215ENST00000534273 ATRNO75882 1429 aa26.82■■□□□ 1.88
PACS1-215ENST00000534273 SLIT2O94813 1529 aa26.82■■□□□ 1.88
PACS1-215ENST00000534273 ATAD2Q6PL18 1390 aa26.82■■□□□ 1.88
PACS1-215ENST00000534273 CDK12Q9NYV4 1490 aaPredicted RBP26.81■■□□□ 1.88
PACS1-215ENST00000534273 ST20-MTHFSA0A0A6YYL1 179 aa26.81■■□□□ 1.88
PACS1-215ENST00000534273 BRD4O60885 1362 aaPredicted RBP26.81■■□□□ 1.88
PACS1-215ENST00000534273 ABCA3Q99758 1704 aa26.8■■□□□ 1.88
PACS1-215ENST00000534273 FAM83GA6ND36 823 aa26.8■■□□□ 1.88
PACS1-215ENST00000534273 NUTM2GQ5VZR2 741 aa26.8■■□□□ 1.88
PACS1-215ENST00000534273 UNC5CLQ8IV45 518 aa26.8■■□□□ 1.88
PACS1-215ENST00000534273 TESK2Q96S53 571 aa26.8■■□□□ 1.88
PACS1-215ENST00000534273 ABTB2Q8N961 1025 aa26.79■■□□□ 1.88
PACS1-215ENST00000534273 USP6P35125 1406 aa26.78■■□□□ 1.88
PACS1-215ENST00000534273 ZNF692Q9BU19 519 aaPredicted RBP26.76■■□□□ 1.87
PACS1-215ENST00000534273 SSH2Q76I76 1423 aa26.75■■□□□ 1.87
PACS1-215ENST00000534273 PUS7Q96PZ0 661 aaKnown RBP26.75■■□□□ 1.87
PACS1-215ENST00000534273 USP47Q96K76 1375 aa26.74■■□□□ 1.87
PACS1-215ENST00000534273 RGS12O14924 1447 aa26.73■■□□□ 1.87
PACS1-215ENST00000534273 CRYBG1Q9Y4K1 1723 aa26.73■■□□□ 1.87
PACS1-215ENST00000534273 GJD4Q96KN9 370 aaPredicted RBP26.73■■□□□ 1.87
PACS1-215ENST00000534273 CPSF1Q10570 1443 aaKnown RBP26.73■■□□□ 1.87
PACS1-215ENST00000534273 USP19O94966 1318 aa26.72■■□□□ 1.87
PACS1-215ENST00000534273 SLC24A1O60721 1099 aa26.72■■□□□ 1.87
PACS1-215ENST00000534273 NLRP13Q86W25 1043 aa26.72■■□□□ 1.87
PACS1-215ENST00000534273 PRDM11Q9NQV5 511 aa26.71■■□□□ 1.87
PACS1-215ENST00000534273 VPS72Q15906 364 aa26.7■■□□□ 1.86
PACS1-215ENST00000534273 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.7■■□□□ 1.86
PACS1-215ENST00000534273 TTC21BQ7Z4L5 1316 aa26.69■■□□□ 1.86
PACS1-215ENST00000534273 TMC1Q8TDI8 760 aa26.69■■□□□ 1.86
PACS1-215ENST00000534273 BTG4Q9NY30 223 aa26.69■■□□□ 1.86
PACS1-215ENST00000534273 KIAA0232Q92628 1395 aa26.69■■□□□ 1.86
PACS1-215ENST00000534273 SLC12A5Q9H2X9 1139 aa26.68■■□□□ 1.86
PACS1-215ENST00000534273 KTN1Q86UP2 1357 aaKnown RBP26.68■■□□□ 1.86
PACS1-215ENST00000534273 NLRP6P59044 892 aa26.67■■□□□ 1.86
PACS1-215ENST00000534273 ZC3H6P61129 1189 aaKnown RBP26.67■■□□□ 1.86
PACS1-215ENST00000534273 PLCH1Q4KWH8 1693 aa26.66■■□□□ 1.86
PACS1-215ENST00000534273 NWD2Q9ULI1 1742 aa26.66■■□□□ 1.86
PACS1-215ENST00000534273 GCP02774 474 aa26.66■■□□□ 1.86
PACS1-215ENST00000534273 COL14A1Q05707 1796 aaKnown RBP26.66■■□□□ 1.86
PACS1-215ENST00000534273 PHRF1Q9P1Y6 1649 aaKnown RBP26.65■■□□□ 1.86
PACS1-215ENST00000534273 CHRNA2Q15822 529 aa26.65■■□□□ 1.86
PACS1-215ENST00000534273 CD163L1Q9NR16 1453 aa26.65■■□□□ 1.86
PACS1-215ENST00000534273 TTC21AQ8NDW8 1320 aa26.65■■□□□ 1.86
PACS1-215ENST00000534273 AKAP12Q02952 1782 aa26.63■■□□□ 1.85
PACS1-215ENST00000534273 CPDO75976 1380 aa26.63■■□□□ 1.85
PACS1-215ENST00000534273 TMF1P82094 1093 aa26.63■■□□□ 1.85
PACS1-215ENST00000534273 HDGFL2Q7Z4V5 671 aaPredicted RBP26.62■■□□□ 1.85
PACS1-215ENST00000534273 TERF2IPQ9NYB0 399 aa26.62■■□□□ 1.85
PACS1-215ENST00000534273 CCDC9Q9Y3X0 531 aaKnown RBP26.62■■□□□ 1.85
PACS1-215ENST00000534273 GLI3P10071 1580 aa26.62■■□□□ 1.85
PACS1-215ENST00000534273 NRKQ7Z2Y5 1582 aa26.62■■□□□ 1.85
PACS1-215ENST00000534273 NINLQ9Y2I6 1382 aa26.6■■□□□ 1.85
PACS1-215ENST00000534273 PIK3C2AO00443 1686 aa26.6■■□□□ 1.85
PACS1-215ENST00000534273 NRAPQ86VF7 1730 aa26.59■■□□□ 1.85
PACS1-215ENST00000534273 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.58■■□□□ 1.85
PACS1-215ENST00000534273 UPF1Q92900 1129 aaKnown RBP eCLIP26.58■■□□□ 1.85
PACS1-215ENST00000534273 SLIT3O75094 1523 aa26.58■■□□□ 1.85
PACS1-215ENST00000534273 A0A1W2PP64 1363 aa26.58■■□□□ 1.84
PACS1-215ENST00000534273 ONECUT3O60422 494 aaPredicted RBP26.57■■□□□ 1.84
PACS1-215ENST00000534273 SPATA31A5Q5VU36 1347 aa26.56■■□□□ 1.84
PACS1-215ENST00000534273 SPATA31A7Q8IWB4 1347 aa26.56■■□□□ 1.84
PACS1-215ENST00000534273 MON2Q7Z3U7 1717 aa26.56■■□□□ 1.84
PACS1-215ENST00000534273 CDCA8Q53HL2 280 aa26.55■■□□□ 1.84
PACS1-215ENST00000534273 EDC4Q6P2E9 1401 aaKnown RBP26.55■■□□□ 1.84
PACS1-215ENST00000534273 NME9Q86XW9 330 aa26.54■■□□□ 1.84
PACS1-215ENST00000534273 SEPT12Q8IYM1 358 aa26.54■■□□□ 1.84
PACS1-215ENST00000534273 ZRANB1Q9UGI0 708 aa26.54■■□□□ 1.84
PACS1-215ENST00000534273 USP31Q70CQ4 1352 aa26.54■■□□□ 1.84
PACS1-215ENST00000534273 STRN4Q9NRL3 753 aa26.53■■□□□ 1.84
PACS1-215ENST00000534273 KCNH5Q8NCM2 988 aa26.52■■□□□ 1.84
PACS1-215ENST00000534273 CAMTA1Q9Y6Y1 1673 aa26.52■■□□□ 1.84
PACS1-215ENST00000534273 AATKQ6ZMQ8 1374 aa26.51■■□□□ 1.83
PACS1-215ENST00000534273 EVA1CP58658 441 aa26.51■■□□□ 1.83
PACS1-215ENST00000534273 ZBTB7CA1YPR0 619 aa26.5■■□□□ 1.83
PACS1-215ENST00000534273 FAM98CQ17RN3 349 aaKnown RBP26.5■■□□□ 1.83
PACS1-215ENST00000534273 SPATA31A1Q5TZJ5 1347 aa26.49■■□□□ 1.83
PACS1-215ENST00000534273 EIF4G2P78344 907 aaKnown RBP eCLIP26.49■■□□□ 1.83
PACS1-215ENST00000534273 ARHGEF25Q86VW2 580 aa26.49■■□□□ 1.83
PACS1-215ENST00000534273 LMO7Q8WWI1 1683 aa26.49■■□□□ 1.83
PACS1-215ENST00000534273 ANKRD36BQ8N2N9 1353 aa26.48■■□□□ 1.83
PACS1-215ENST00000534273 SOX12O15370 315 aa26.48■■□□□ 1.83
PACS1-215ENST00000534273 HSPA5P11021 654 aaKnown RBP26.47■■□□□ 1.83
PACS1-215ENST00000534273 LARP1Q6PKG0 1096 aaKnown RBP26.47■■□□□ 1.83
PACS1-215ENST00000534273 NFAT5O94916 1531 aa26.45■■□□□ 1.83
PACS1-215ENST00000534273 COL5A2P05997 1499 aaPredicted RBP26.44■■□□□ 1.82
PACS1-215ENST00000534273 AXIN2Q9Y2T1 843 aa26.44■■□□□ 1.82
PACS1-215ENST00000534273 A0A0G2JS52 829 aa26.43■■□□□ 1.82
PACS1-215ENST00000534273 MYT1Q01538 1121 aa26.43■■□□□ 1.82
PACS1-215ENST00000534273 KRT27Q7Z3Y8 459 aa26.42■■□□□ 1.82
PACS1-215ENST00000534273 USP54Q70EL1 1684 aa26.41■■□□□ 1.82
PACS1-215ENST00000534273 OVOS2A0A0J9YW53 1432 aa26.41■■□□□ 1.82
PACS1-215ENST00000534273 OVOS2Q6IE36 1432 aa26.41■■□□□ 1.82
PACS1-215ENST00000534273 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
PACS1-215ENST00000534273 COL18A1P39060 1754 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms