RNA–Protein interactions for RNA: ENST00000533839.5

FOXRED1-216, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 4

Gene FOXRED1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-216ENST00000533839 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
FOXRED1-216ENST00000533839 CCDC125Q86Z20 511 aa13.58□□□□□ -0.24
FOXRED1-216ENST00000533839 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.24
FOXRED1-216ENST00000533839 EVA1CP58658 441 aa13.57□□□□□ -0.24
FOXRED1-216ENST00000533839 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
FOXRED1-216ENST00000533839 ATRNO75882 1429 aa13.56□□□□□ -0.24
FOXRED1-216ENST00000533839 BCL9LQ86UU0 1499 aa13.56□□□□□ -0.24
FOXRED1-216ENST00000533839 CLSPNQ9HAW4 1339 aa13.56□□□□□ -0.24
FOXRED1-216ENST00000533839 PPIP5K1Q6PFW1 1433 aa13.56□□□□□ -0.24
FOXRED1-216ENST00000533839 RGPD8O14715 1765 aaPredicted RBP13.55□□□□□ -0.24
FOXRED1-216ENST00000533839 NLRP6P59044 892 aa13.55□□□□□ -0.24
FOXRED1-216ENST00000533839 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
FOXRED1-216ENST00000533839 PUS7Q96PZ0 661 aaKnown RBP13.55□□□□□ -0.24
FOXRED1-216ENST00000533839 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
FOXRED1-216ENST00000533839 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
FOXRED1-216ENST00000533839 A0A0G2JS52 829 aa13.54□□□□□ -0.24
FOXRED1-216ENST00000533839 MYT1Q01538 1121 aa13.54□□□□□ -0.24
FOXRED1-216ENST00000533839 ATP7BP35670 1465 aa13.54□□□□□ -0.24
FOXRED1-216ENST00000533839 ONECUT3O60422 494 aaPredicted RBP13.53□□□□□ -0.24
FOXRED1-216ENST00000533839 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
FOXRED1-216ENST00000533839 SEPT12Q8IYM1 358 aa13.53□□□□□ -0.24
FOXRED1-216ENST00000533839 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
FOXRED1-216ENST00000533839 SLIT2O94813 1529 aa13.53□□□□□ -0.24
FOXRED1-216ENST00000533839 GCP02774 474 aa13.52□□□□□ -0.25
FOXRED1-216ENST00000533839 SF3B2Q13435 895 aaKnown RBP13.52□□□□□ -0.25
FOXRED1-216ENST00000533839 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
FOXRED1-216ENST00000533839 TERF2IPQ9NYB0 399 aa13.52□□□□□ -0.25
FOXRED1-216ENST00000533839 USP32Q8NFA0 1604 aa13.52□□□□□ -0.25
FOXRED1-216ENST00000533839 KCNH5Q8NCM2 988 aa13.51□□□□□ -0.25
FOXRED1-216ENST00000533839 RGS12O14924 1447 aa13.5□□□□□ -0.25
FOXRED1-216ENST00000533839 TTC21AQ8NDW8 1320 aa13.5□□□□□ -0.25
FOXRED1-216ENST00000533839 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
FOXRED1-216ENST00000533839 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
FOXRED1-216ENST00000533839 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
FOXRED1-216ENST00000533839 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
FOXRED1-216ENST00000533839 CHRNA2Q15822 529 aa13.49□□□□□ -0.25
FOXRED1-216ENST00000533839 KRT27Q7Z3Y8 459 aa13.49□□□□□ -0.25
FOXRED1-216ENST00000533839 CCER1Q8TC90 406 aaPredicted RBP13.49□□□□□ -0.25
FOXRED1-216ENST00000533839 KIAA0232Q92628 1395 aa13.48□□□□□ -0.25
FOXRED1-216ENST00000533839 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
FOXRED1-216ENST00000533839 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
FOXRED1-216ENST00000533839 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 TRPM1Q7Z4N2 1603 aa13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 SPATA31A5Q5VU36 1347 aa13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 TTC21BQ7Z4L5 1316 aa13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 SPATA31A7Q8IWB4 1347 aa13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 ZBTB7CA1YPR0 619 aa13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 TMF1P82094 1093 aa13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 FAM98CQ17RN3 349 aaKnown RBP13.47□□□□□ -0.25
FOXRED1-216ENST00000533839 USP6P35125 1406 aa13.46□□□□□ -0.26
FOXRED1-216ENST00000533839 CPDO75976 1380 aa13.45□□□□□ -0.26
FOXRED1-216ENST00000533839 USP19O94966 1318 aa13.45□□□□□ -0.26
FOXRED1-216ENST00000533839 MARF1Q9Y4F3 1742 aaKnown RBP13.45□□□□□ -0.26
FOXRED1-216ENST00000533839 SLC12A5Q9H2X9 1139 aa13.45□□□□□ -0.26
FOXRED1-216ENST00000533839 THRAP3Q9Y2W1 955 aaKnown RBP13.45□□□□□ -0.26
FOXRED1-216ENST00000533839 PDE3BQ13370 1112 aa13.44□□□□□ -0.26
FOXRED1-216ENST00000533839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.44□□□□□ -0.26
FOXRED1-216ENST00000533839 USP35Q9P2H5 1018 aa13.44□□□□□ -0.26
FOXRED1-216ENST00000533839 TRPM3Q9HCF6 1732 aaPredicted RBP13.44□□□□□ -0.26
FOXRED1-216ENST00000533839 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
FOXRED1-216ENST00000533839 SPATA31A1Q5TZJ5 1347 aa13.43□□□□□ -0.26
FOXRED1-216ENST00000533839 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
FOXRED1-216ENST00000533839 BARGINQ6ZT62 677 aa13.43□□□□□ -0.26
FOXRED1-216ENST00000533839 TCP11L2Q8N4U5 519 aa13.43□□□□□ -0.26
FOXRED1-216ENST00000533839 ALS2Q96Q42 1657 aa13.43□□□□□ -0.26
FOXRED1-216ENST00000533839 ZRANB1Q9UGI0 708 aa13.42□□□□□ -0.26
FOXRED1-216ENST00000533839 COL14A1Q05707 1796 aaKnown RBP13.42□□□□□ -0.26
FOXRED1-216ENST00000533839 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
FOXRED1-216ENST00000533839 CSB-PGBD3P0DP91 1061 aa13.41□□□□□ -0.26
FOXRED1-216ENST00000533839 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
FOXRED1-216ENST00000533839 TOM1L2Q6ZVM7 507 aa13.41□□□□□ -0.26
FOXRED1-216ENST00000533839 TESK2Q96S53 571 aa13.41□□□□□ -0.26
FOXRED1-216ENST00000533839 AATKQ6ZMQ8 1374 aa13.41□□□□□ -0.26
FOXRED1-216ENST00000533839 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.41□□□□□ -0.26
FOXRED1-216ENST00000533839 NWD2Q9ULI1 1742 aa13.41□□□□□ -0.26
FOXRED1-216ENST00000533839 CPSF1Q10570 1443 aaKnown RBP13.4□□□□□ -0.26
FOXRED1-216ENST00000533839 SOX12O15370 315 aa13.4□□□□□ -0.26
FOXRED1-216ENST00000533839 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
FOXRED1-216ENST00000533839 ARHGEF25Q86VW2 580 aa13.4□□□□□ -0.26
FOXRED1-216ENST00000533839 CDCA7Q9BWT1 371 aaPredicted RBP13.4□□□□□ -0.26
FOXRED1-216ENST00000533839 SSH2Q76I76 1423 aa13.39□□□□□ -0.27
FOXRED1-216ENST00000533839 BAG6P46379 1132 aa13.39□□□□□ -0.27
FOXRED1-216ENST00000533839 BLMP54132 1417 aaPredicted RBP13.39□□□□□ -0.27
FOXRED1-216ENST00000533839 TOPAZ1Q8N9V7 1692 aa13.38□□□□□ -0.27
FOXRED1-216ENST00000533839 USP47Q96K76 1375 aa13.38□□□□□ -0.27
FOXRED1-216ENST00000533839 COG3Q96JB2 828 aa13.38□□□□□ -0.27
FOXRED1-216ENST00000533839 GLI3P10071 1580 aa13.37□□□□□ -0.27
FOXRED1-216ENST00000533839 USP31Q70CQ4 1352 aa13.36□□□□□ -0.27
FOXRED1-216ENST00000533839 NME9Q86XW9 330 aa13.36□□□□□ -0.27
FOXRED1-216ENST00000533839 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.278e-10■■■■■ 191.5
FOXRED1-216ENST00000533839 CARD10Q9BWT7 1032 aa13.35□□□□□ -0.27
FOXRED1-216ENST00000533839 EDC4Q6P2E9 1401 aaKnown RBP13.35□□□□□ -0.27
FOXRED1-216ENST00000533839 WDR17Q8IZU2 1322 aa13.35□□□□□ -0.27
FOXRED1-216ENST00000533839 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
FOXRED1-216ENST00000533839 CRB1P82279 1406 aa13.34□□□□□ -0.27
FOXRED1-216ENST00000533839 EXOC5O00471 708 aa13.34□□□□□ -0.27
FOXRED1-216ENST00000533839 DDB1Q16531 1140 aa13.34□□□□□ -0.27
FOXRED1-216ENST00000533839 AXIN2Q9Y2T1 843 aa13.34□□□□□ -0.27
FOXRED1-216ENST00000533839 ABCA3Q99758 1704 aa13.33□□□□□ -0.28
FOXRED1-216ENST00000533839 CAMTA1Q9Y6Y1 1673 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms