RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ABCA3Q99758 1704 aa22.31■■□□□ 1.16
TSKU-204ENST00000533752 ST20-MTHFSA0A0A6YYL1 179 aa22.29■■□□□ 1.16
TSKU-204ENST00000533752 PUS7Q96PZ0 661 aaKnown RBP22.29■■□□□ 1.16
TSKU-204ENST00000533752 USP6P35125 1406 aa22.29■■□□□ 1.16
TSKU-204ENST00000533752 FNBP4Q8N3X1 1017 aaPredicted RBP22.28■■□□□ 1.16
TSKU-204ENST00000533752 TESK2Q96S53 571 aa22.27■■□□□ 1.16
TSKU-204ENST00000533752 CABLES1Q8TDN4 633 aa22.26■■□□□ 1.15
TSKU-204ENST00000533752 USP21Q9UK80 565 aa22.26■■□□□ 1.15
TSKU-204ENST00000533752 SOCS7O14512 581 aa22.25■■□□□ 1.15
TSKU-204ENST00000533752 ZNF692Q9BU19 519 aaPredicted RBP22.25■■□□□ 1.15
TSKU-204ENST00000533752 NINLQ9Y2I6 1382 aa22.24■■□□□ 1.15
TSKU-204ENST00000533752 CRYBG1Q9Y4K1 1723 aa22.23■■□□□ 1.15
TSKU-204ENST00000533752 ABTB2Q8N961 1025 aa22.23■■□□□ 1.15
TSKU-204ENST00000533752 CPSF1Q10570 1443 aaKnown RBP22.23■■□□□ 1.15
TSKU-204ENST00000533752 CDK12Q9NYV4 1490 aaPredicted RBP22.22■■□□□ 1.15
TSKU-204ENST00000533752 SLIT2O94813 1529 aa22.22■■□□□ 1.15
TSKU-204ENST00000533752 PLEKHG5O94827 1062 aa22.22■■□□□ 1.15
TSKU-204ENST00000533752 RXRBP28702 533 aa22.22■■□□□ 1.15
TSKU-204ENST00000533752 TRPC5Q9UL62 973 aaPredicted RBP22.22■■□□□ 1.15
TSKU-204ENST00000533752 AKAP12Q02952 1782 aa22.22■■□□□ 1.15
TSKU-204ENST00000533752 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.21■■□□□ 1.15
TSKU-204ENST00000533752 TMF1P82094 1093 aa22.21■■□□□ 1.15
TSKU-204ENST00000533752 QTRT2Q9H974 415 aaKnown RBP22.21■■□□□ 1.15
TSKU-204ENST00000533752 SSH2Q76I76 1423 aa22.21■■□□□ 1.15
TSKU-204ENST00000533752 ATRNO75882 1429 aa22.2■■□□□ 1.14
TSKU-204ENST00000533752 BCL9LQ86UU0 1499 aa22.2■■□□□ 1.14
TSKU-204ENST00000533752 PHRF1Q9P1Y6 1649 aaKnown RBP22.2■■□□□ 1.14
TSKU-204ENST00000533752 RBM6P78332 1123 aaKnown RBP22.19■■□□□ 1.14
TSKU-204ENST00000533752 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
TSKU-204ENST00000533752 NLRP13Q86W25 1043 aa22.19■■□□□ 1.14
TSKU-204ENST00000533752 TMC1Q8TDI8 760 aa22.19■■□□□ 1.14
TSKU-204ENST00000533752 USP19O94966 1318 aa22.19■■□□□ 1.14
TSKU-204ENST00000533752 KTN1Q86UP2 1357 aaKnown RBP22.19■■□□□ 1.14
TSKU-204ENST00000533752 NWD2Q9ULI1 1742 aa22.19■■□□□ 1.14
TSKU-204ENST00000533752 TTC21AQ8NDW8 1320 aa22.18■■□□□ 1.14
TSKU-204ENST00000533752 HDGFL2Q7Z4V5 671 aaPredicted RBP22.18■■□□□ 1.14
TSKU-204ENST00000533752 UNC5CLQ8IV45 518 aa22.18■■□□□ 1.14
TSKU-204ENST00000533752 COL14A1Q05707 1796 aaKnown RBP22.17■■□□□ 1.14
TSKU-204ENST00000533752 MON2Q7Z3U7 1717 aa22.17■■□□□ 1.14
TSKU-204ENST00000533752 PLCH1Q4KWH8 1693 aa22.17■■□□□ 1.14
TSKU-204ENST00000533752 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
TSKU-204ENST00000533752 NUTM2GQ5VZR2 741 aa22.17■■□□□ 1.14
TSKU-204ENST00000533752 TERF2IPQ9NYB0 399 aa22.17■■□□□ 1.14
TSKU-204ENST00000533752 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
TSKU-204ENST00000533752 TTC21BQ7Z4L5 1316 aa22.15■■□□□ 1.14
TSKU-204ENST00000533752 PRDM11Q9NQV5 511 aa22.15■■□□□ 1.14
TSKU-204ENST00000533752 PIK3C2AO00443 1686 aa22.14■■□□□ 1.14
TSKU-204ENST00000533752 FAM83GA6ND36 823 aa22.13■■□□□ 1.13
TSKU-204ENST00000533752 NLRP6P59044 892 aa22.13■■□□□ 1.13
TSKU-204ENST00000533752 EIF4G2P78344 907 aaKnown RBP eCLIP22.13■■□□□ 1.13
TSKU-204ENST00000533752 SLC12A5Q9H2X9 1139 aa22.13■■□□□ 1.13
TSKU-204ENST00000533752 EDC4Q6P2E9 1401 aaKnown RBP22.13■■□□□ 1.13
TSKU-204ENST00000533752 A0A1W2PP64 1363 aa22.12■■□□□ 1.13
TSKU-204ENST00000533752 CPDO75976 1380 aa22.12■■□□□ 1.13
TSKU-204ENST00000533752 KIAA0232Q92628 1395 aa22.12■■□□□ 1.13
TSKU-204ENST00000533752 SLIT3O75094 1523 aa22.12■■□□□ 1.13
TSKU-204ENST00000533752 RGS12O14924 1447 aa22.1■■□□□ 1.13
TSKU-204ENST00000533752 VPS72Q15906 364 aa22.1■■□□□ 1.13
TSKU-204ENST00000533752 GJD4Q96KN9 370 aaPredicted RBP22.1■■□□□ 1.13
TSKU-204ENST00000533752 NRAPQ86VF7 1730 aa22.09■■□□□ 1.13
TSKU-204ENST00000533752 GCP02774 474 aa22.09■■□□□ 1.13
TSKU-204ENST00000533752 BTG4Q9NY30 223 aa22.09■■□□□ 1.13
TSKU-204ENST00000533752 ANKRD36BQ8N2N9 1353 aa22.09■■□□□ 1.13
TSKU-204ENST00000533752 ZC3H6P61129 1189 aaKnown RBP22.08■■□□□ 1.13
TSKU-204ENST00000533752 KCNH5Q8NCM2 988 aa22.07■■□□□ 1.12
TSKU-204ENST00000533752 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.06■■□□□ 1.12
TSKU-204ENST00000533752 USP31Q70CQ4 1352 aa22.06■■□□□ 1.12
TSKU-204ENST00000533752 USP54Q70EL1 1684 aa22.06■■□□□ 1.12
TSKU-204ENST00000533752 GLI3P10071 1580 aa22.04■■□□□ 1.12
TSKU-204ENST00000533752 HSPA5P11021 654 aaKnown RBP22.04■■□□□ 1.12
TSKU-204ENST00000533752 CHRNA2Q15822 529 aa22.04■■□□□ 1.12
TSKU-204ENST00000533752 CCDC9Q9Y3X0 531 aaKnown RBP22.04■■□□□ 1.12
TSKU-204ENST00000533752 LMO7Q8WWI1 1683 aa22.02■■□□□ 1.12
TSKU-204ENST00000533752 NME9Q86XW9 330 aa22.01■■□□□ 1.11
TSKU-204ENST00000533752 AATKQ6ZMQ8 1374 aa22■■□□□ 1.11
TSKU-204ENST00000533752 MYOM1P52179 1685 aa22■■□□□ 1.11
TSKU-204ENST00000533752 NFAT5O94916 1531 aa22■■□□□ 1.11
TSKU-204ENST00000533752 OVOS2A0A0J9YW53 1432 aa21.99■■□□□ 1.11
TSKU-204ENST00000533752 OVOS2Q6IE36 1432 aa21.99■■□□□ 1.11
TSKU-204ENST00000533752 ABCC6O95255 1503 aa21.99■■□□□ 1.11
TSKU-204ENST00000533752 SPATA31A5Q5VU36 1347 aa21.98■■□□□ 1.11
TSKU-204ENST00000533752 SPATA31A7Q8IWB4 1347 aa21.98■■□□□ 1.11
TSKU-204ENST00000533752 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
TSKU-204ENST00000533752 EVA1CP58658 441 aa21.97■■□□□ 1.11
TSKU-204ENST00000533752 STRN4Q9NRL3 753 aa21.97■■□□□ 1.11
TSKU-204ENST00000533752 COL5A2P05997 1499 aaPredicted RBP21.96■■□□□ 1.11
TSKU-204ENST00000533752 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
TSKU-204ENST00000533752 ARHGEF25Q86VW2 580 aa21.96■■□□□ 1.11
TSKU-204ENST00000533752 SOX12O15370 315 aa21.95■■□□□ 1.1
TSKU-204ENST00000533752 ONECUT3O60422 494 aaPredicted RBP21.95■■□□□ 1.1
TSKU-204ENST00000533752 COG3Q96JB2 828 aa21.94■■□□□ 1.1
TSKU-204ENST00000533752 ZRANB1Q9UGI0 708 aa21.94■■□□□ 1.1
TSKU-204ENST00000533752 SPATA31A1Q5TZJ5 1347 aa21.94■■□□□ 1.1
TSKU-204ENST00000533752 POLR3GLQ9BT43 218 aa21.93■■□□□ 1.1
TSKU-204ENST00000533752 SEPT12Q8IYM1 358 aa21.92■■□□□ 1.1
TSKU-204ENST00000533752 COL18A1P39060 1754 aa21.92■■□□□ 1.1
TSKU-204ENST00000533752 NSD3Q9BZ95 1437 aa21.91■■□□□ 1.1
TSKU-204ENST00000533752 A0A0G2JS52 829 aa21.91■■□□□ 1.1
TSKU-204ENST00000533752 MYT1Q01538 1121 aa21.91■■□□□ 1.1
TSKU-204ENST00000533752 FAM98CQ17RN3 349 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms