RNA–Protein interactions for RNA: ENST00000533668.5

FGFR1-240, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5

Gene FGFR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-240ENST00000533668 ZNF772Q68DY9 489 aaPredicted RBP12.3□□□□□ -0.44
FGFR1-240ENST00000533668 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
FGFR1-240ENST00000533668 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
FGFR1-240ENST00000533668 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
FGFR1-240ENST00000533668 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
FGFR1-240ENST00000533668 VGFO15240 615 aaPredicted RBP12.26□□□□□ -0.45
FGFR1-240ENST00000533668 DDX17Q92841 729 aaKnown RBP12.26□□□□□ -0.45
FGFR1-240ENST00000533668 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
FGFR1-240ENST00000533668 LAMC1P11047 1609 aa12.26□□□□□ -0.45
FGFR1-240ENST00000533668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.25□□□□□ -0.45
FGFR1-240ENST00000533668 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
FGFR1-240ENST00000533668 AFF2P51816 1311 aa12.25□□□□□ -0.45
FGFR1-240ENST00000533668 HFM1A2PYH4 1435 aa12.25□□□□□ -0.45
FGFR1-240ENST00000533668 PTCH1Q13635 1447 aa12.25□□□□□ -0.45
FGFR1-240ENST00000533668 RXRBP28702 533 aa12.24□□□□□ -0.45
FGFR1-240ENST00000533668 C1orf167Q5SNV9 1468 aa12.24□□□□□ -0.45
FGFR1-240ENST00000533668 KNDC1Q76NI1 1749 aa12.24□□□□□ -0.45
FGFR1-240ENST00000533668 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
FGFR1-240ENST00000533668 C8orf37Q96NL8 207 aa12.24□□□□□ -0.45
FGFR1-240ENST00000533668 PNPLA6Q8IY17 1366 aa12.23□□□□□ -0.45
FGFR1-240ENST00000533668 RGL2O15211 777 aa12.23□□□□□ -0.45
FGFR1-240ENST00000533668 MAMSTRQ6ZN01 415 aa12.23□□□□□ -0.45
FGFR1-240ENST00000533668 RGPD8O14715 1765 aaPredicted RBP12.23□□□□□ -0.45
FGFR1-240ENST00000533668 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.45
FGFR1-240ENST00000533668 COL22A1Q8NFW1 1626 aaPredicted RBP12.22□□□□□ -0.45
FGFR1-240ENST00000533668 CDC42BPGQ6DT37 1551 aa12.22□□□□□ -0.45
FGFR1-240ENST00000533668 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.45
FGFR1-240ENST00000533668 ROBO2Q9HCK4 1378 aa12.21□□□□□ -0.45
FGFR1-240ENST00000533668 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
FGFR1-240ENST00000533668 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
FGFR1-240ENST00000533668 EFCAB3Q8N7B9 438 aa12.2□□□□□ -0.46
FGFR1-240ENST00000533668 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.46
FGFR1-240ENST00000533668 FMN2Q9NZ56 1722 aa12.2□□□□□ -0.46
FGFR1-240ENST00000533668 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
FGFR1-240ENST00000533668 RGS12O14924 1447 aa12.2□□□□□ -0.46
FGFR1-240ENST00000533668 RPGRIP1LQ68CZ1 1315 aa12.19□□□□□ -0.46
FGFR1-240ENST00000533668 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
FGFR1-240ENST00000533668 KIF1AQ12756 1690 aa12.19□□□□□ -0.46
FGFR1-240ENST00000533668 PDCD7Q8N8D1 485 aaKnown RBP12.18□□□□□ -0.46
FGFR1-240ENST00000533668 NGLY1Q96IV0 654 aa12.18□□□□□ -0.46
FGFR1-240ENST00000533668 ORAI2Q96SN7 254 aa12.18□□□□□ -0.46
FGFR1-240ENST00000533668 PRAG1Q86YV5 1406 aa12.17□□□□□ -0.46
FGFR1-240ENST00000533668 RGL3Q3MIN7 710 aa12.16□□□□□ -0.46
FGFR1-240ENST00000533668 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
FGFR1-240ENST00000533668 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
FGFR1-240ENST00000533668 RBM6P78332 1123 aaKnown RBP12.15□□□□□ -0.46
FGFR1-240ENST00000533668 ESCO1Q5FWF5 840 aa12.15□□□□□ -0.46
FGFR1-240ENST00000533668 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
FGFR1-240ENST00000533668 STK26Q9P289 416 aa12.15□□□□□ -0.46
FGFR1-240ENST00000533668 SOS2Q07890 1332 aaPredicted RBP12.14□□□□□ -0.47
FGFR1-240ENST00000533668 NUTM2FA1L443 756 aa12.14□□□□□ -0.47
FGFR1-240ENST00000533668 USP21Q9UK80 565 aa12.14□□□□□ -0.47
FGFR1-240ENST00000533668 STK24Q9Y6E0 443 aa12.14□□□□□ -0.47
FGFR1-240ENST00000533668 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
FGFR1-240ENST00000533668 ADGRF5Q8IZF2 1346 aa12.13□□□□□ -0.47
FGFR1-240ENST00000533668 ABCA3Q99758 1704 aa12.13□□□□□ -0.47
FGFR1-240ENST00000533668 PXDNQ92626 1479 aa12.13□□□□□ -0.47
FGFR1-240ENST00000533668 BRWD3Q6RI45 1802 aa12.12□□□□□ -0.47
FGFR1-240ENST00000533668 STK25O00506 426 aa12.12□□□□□ -0.47
FGFR1-240ENST00000533668 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
FGFR1-240ENST00000533668 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
FGFR1-240ENST00000533668 ANKRD30BQ9BXX2 1392 aa12.12□□□□□ -0.47
FGFR1-240ENST00000533668 PLCH1Q4KWH8 1693 aa12.12□□□□□ -0.47
FGFR1-240ENST00000533668 SPATA31E1Q6ZUB1 1445 aa12.11□□□□□ -0.47
FGFR1-240ENST00000533668 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
FGFR1-240ENST00000533668 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
FGFR1-240ENST00000533668 PIK3C2GO75747 1445 aa12.11□□□□□ -0.47
FGFR1-240ENST00000533668 MYOM2P54296 1465 aa12.1□□□□□ -0.47
FGFR1-240ENST00000533668 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
FGFR1-240ENST00000533668 ATAD2Q6PL18 1390 aa12.1□□□□□ -0.47
FGFR1-240ENST00000533668 TMEM132EQ6IEE7 984 aa12.1□□□□□ -0.47
FGFR1-240ENST00000533668 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
FGFR1-240ENST00000533668 MPHOSPH9Q99550 1183 aa12.1□□□□□ -0.47
FGFR1-240ENST00000533668 TECPR2O15040 1411 aa12.1□□□□□ -0.47
FGFR1-240ENST00000533668 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
FGFR1-240ENST00000533668 FOXO3O43524 673 aa12.09□□□□□ -0.47
FGFR1-240ENST00000533668 YTHDC2Q9H6S0 1430 aaKnown RBP12.09□□□□□ -0.47
FGFR1-240ENST00000533668 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
FGFR1-240ENST00000533668 ATRNO75882 1429 aa12.08□□□□□ -0.48
FGFR1-240ENST00000533668 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.48
FGFR1-240ENST00000533668 SOX12O15370 315 aa12.07□□□□□ -0.48
FGFR1-240ENST00000533668 ABCC11Q96J66 1382 aa12.06□□□□□ -0.48
FGFR1-240ENST00000533668 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
FGFR1-240ENST00000533668 SLAIN1Q8ND83 568 aa12.06□□□□□ -0.48
FGFR1-240ENST00000533668 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
FGFR1-240ENST00000533668 GLI3P10071 1580 aa12.05□□□□□ -0.48
FGFR1-240ENST00000533668 FNBP4Q8N3X1 1017 aaPredicted RBP12.05□□□□□ -0.48
FGFR1-240ENST00000533668 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
FGFR1-240ENST00000533668 BCL9LQ86UU0 1499 aa12.04□□□□□ -0.48
FGFR1-240ENST00000533668 SAFB2Q14151 953 aaKnown RBP eCLIP12.04□□□□□ -0.48
FGFR1-240ENST00000533668 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
FGFR1-240ENST00000533668 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
FGFR1-240ENST00000533668 TNS3Q68CZ2 1445 aa12.03□□□□□ -0.48
FGFR1-240ENST00000533668 LMOD2Q6P5Q4 547 aa12.03□□□□□ -0.48
FGFR1-240ENST00000533668 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
FGFR1-240ENST00000533668 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
FGFR1-240ENST00000533668 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.48
FGFR1-240ENST00000533668 G3V3G9 751 aa12.02□□□□□ -0.49
FGFR1-240ENST00000533668 C3orf67Q6ZVT6 689 aa12.02□□□□□ -0.49
FGFR1-240ENST00000533668 KRT28Q7Z3Y7 464 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms