RNA–Protein interactions for RNA: ENST00000533660.1

MS4A6A-219, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-219ENST00000533660 GMPR2Q9P2T1 348 aaKnown RBP7.99□□□□□ -1.13
MS4A6A-219ENST00000533660 C11orf95C9JLR9 678 aaPredicted RBP7.98□□□□□ -1.13
MS4A6A-219ENST00000533660 BCANQ96GW7 911 aa7.98□□□□□ -1.13
MS4A6A-219ENST00000533660 TRIM47Q96LD4 638 aa7.97□□□□□ -1.13
MS4A6A-219ENST00000533660 LIMD1Q9UGP4 676 aa7.97□□□□□ -1.13
MS4A6A-219ENST00000533660 WASF2Q9Y6W5 498 aa7.97□□□□□ -1.13
MS4A6A-219ENST00000533660 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
MS4A6A-219ENST00000533660 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
MS4A6A-219ENST00000533660 ARMC2Q8NEN0 867 aa7.96□□□□□ -1.14
MS4A6A-219ENST00000533660 CTHP32929 405 aa7.95□□□□□ -1.14
MS4A6A-219ENST00000533660 CLK2P49760 499 aaKnown RBP7.95□□□□□ -1.14
MS4A6A-219ENST00000533660 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
MS4A6A-219ENST00000533660 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
MS4A6A-219ENST00000533660 NUTM2BA6NNL0 878 aaPredicted RBP7.94□□□□□ -1.14
MS4A6A-219ENST00000533660 NUTM2EB1AL46 878 aaPredicted RBP7.94□□□□□ -1.14
MS4A6A-219ENST00000533660 QPCTQ16769 361 aa7.94□□□□□ -1.14
MS4A6A-219ENST00000533660 NUTM2DQ5VT03 806 aaPredicted RBP7.94□□□□□ -1.14
MS4A6A-219ENST00000533660 NUTM2AQ8IVF1 878 aaPredicted RBP7.94□□□□□ -1.14
MS4A6A-219ENST00000533660 FAM174AQ8TBP5 190 aa7.94□□□□□ -1.14
MS4A6A-219ENST00000533660 CDK15Q96Q40 435 aa7.94□□□□□ -1.14
MS4A6A-219ENST00000533660 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
MS4A6A-219ENST00000533660 MAP10Q9P2G4 905 aa7.93□□□□□ -1.14
MS4A6A-219ENST00000533660 BPHLQ86WA6 291 aaPredicted RBP7.92□□□□□ -1.14
MS4A6A-219ENST00000533660 GPKOWQ92917 476 aaPredicted RBP eCLIP7.92□□□□□ -1.14
MS4A6A-219ENST00000533660 CAPN5O15484 640 aaPredicted RBP7.91□□□□□ -1.14
MS4A6A-219ENST00000533660 PER1O15534 1290 aaPredicted RBP7.91□□□□□ -1.14
MS4A6A-219ENST00000533660 ADH1CP00326 375 aa7.91□□□□□ -1.14
MS4A6A-219ENST00000533660 SKIV2LQ15477 1246 aaKnown RBP7.91□□□□□ -1.14
MS4A6A-219ENST00000533660 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
MS4A6A-219ENST00000533660 NBPF14Q5TI25 921 aa7.91□□□□□ -1.14
MS4A6A-219ENST00000533660 DDRGK1Q96HY6 314 aa7.91□□□□□ -1.14
MS4A6A-219ENST00000533660 SH3D19Q5HYK7 790 aa7.9□□□□□ -1.14
MS4A6A-219ENST00000533660 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
MS4A6A-219ENST00000533660 SNRPBP14678 240 aaKnown RBP7.89□□□□□ -1.15
MS4A6A-219ENST00000533660 NFX1Q12986 1120 aaKnown RBP7.89□□□□□ -1.15
MS4A6A-219ENST00000533660 NR5A1Q13285 461 aa7.89□□□□□ -1.15
MS4A6A-219ENST00000533660 NNTQ13423 1086 aa7.89□□□□□ -1.15
MS4A6A-219ENST00000533660 RTL5Q5HYW3 569 aaPredicted RBP7.89□□□□□ -1.15
MS4A6A-219ENST00000533660 SH3RF1Q7Z6J0 888 aa7.89□□□□□ -1.15
MS4A6A-219ENST00000533660 WFS1O76024 890 aa7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 PPP2R2DQ66LE6 453 aa7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 NPAS3Q8IXF0 933 aa7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 TRMT44Q8IYL2 757 aaKnown RBP7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 FOXJ1Q92949 421 aa7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 C1QTNF2Q9BXJ5 285 aa7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 KLF16Q9BXK1 252 aaPredicted RBP7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 KDM4CQ9H3R0 1056 aa7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 MAP4K5Q9Y4K4 846 aa7.88□□□□□ -1.15
MS4A6A-219ENST00000533660 SLC24A1O60721 1099 aa7.87□□□□□ -1.15
MS4A6A-219ENST00000533660 TRIM46Q7Z4K8 759 aa7.87□□□□□ -1.15
MS4A6A-219ENST00000533660 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.87□□□□□ -1.15
MS4A6A-219ENST00000533660 ZC3H4Q9UPT8 1303 aaKnown RBP7.86□□□□□ -1.15
MS4A6A-219ENST00000533660 WIPF1O43516 503 aa7.86□□□□□ -1.15
MS4A6A-219ENST00000533660 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
MS4A6A-219ENST00000533660 SH3BP5LQ7L8J4 393 aa7.86□□□□□ -1.15
MS4A6A-219ENST00000533660 TSC1Q92574 1164 aa7.86□□□□□ -1.15
MS4A6A-219ENST00000533660 POLR3EQ9NVU0 708 aa7.86□□□□□ -1.15
MS4A6A-219ENST00000533660 TERTO14746 1132 aaKnown RBP7.85□□□□□ -1.15
MS4A6A-219ENST00000533660 TIMP2P16035 220 aa7.85□□□□□ -1.15
MS4A6A-219ENST00000533660 GRM5P41594 1212 aa7.84□□□□□ -1.15
MS4A6A-219ENST00000533660 AGERQ15109 404 aa7.84□□□□□ -1.15
MS4A6A-219ENST00000533660 GOPCQ9HD26 462 aa7.84□□□□□ -1.15
MS4A6A-219ENST00000533660 BMP1P13497 986 aa7.83□□□□□ -1.16
MS4A6A-219ENST00000533660 WDR4P57081 412 aaKnown RBP7.83□□□□□ -1.16
MS4A6A-219ENST00000533660 SCARF1Q14162 830 aa7.83□□□□□ -1.16
MS4A6A-219ENST00000533660 MRPL14Q6P1L8 145 aaKnown RBP7.83□□□□□ -1.16
MS4A6A-219ENST00000533660 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
MS4A6A-219ENST00000533660 CTDSPL2Q05D32 466 aa7.82□□□□□ -1.16
MS4A6A-219ENST00000533660 FAM117AQ9C073 453 aa7.82□□□□□ -1.16
MS4A6A-219ENST00000533660 GPBP1L1Q9HC44 474 aaPredicted RBP7.82□□□□□ -1.16
MS4A6A-219ENST00000533660 NXF1Q9UBU9 619 aaKnown RBP7.82□□□□□ -1.16
MS4A6A-219ENST00000533660 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
MS4A6A-219ENST00000533660 GPSM3Q9Y4H4 160 aa7.82□□□□□ -1.16
MS4A6A-219ENST00000533660 ZFP42Q96MM3 310 aa7.81□□□□□ -1.16
MS4A6A-219ENST00000533660 FKBPLQ9UIM3 349 aa7.81□□□□□ -1.16
MS4A6A-219ENST00000533660 ARID5BQ14865 1188 aa7.8□□□□□ -1.16
MS4A6A-219ENST00000533660 SLC16A10Q8TF71 515 aa7.8□□□□□ -1.16
MS4A6A-219ENST00000533660 ZIC2O95409 532 aaPredicted RBP7.79□□□□□ -1.16
MS4A6A-219ENST00000533660 NR3C2P08235 984 aa7.79□□□□□ -1.16
MS4A6A-219ENST00000533660 INSM1Q01101 510 aaPredicted RBP7.79□□□□□ -1.16
MS4A6A-219ENST00000533660 PNMA1Q8ND90 353 aa7.79□□□□□ -1.16
MS4A6A-219ENST00000533660 ERFEQ4G0M1 354 aa7.78□□□□□ -1.16
MS4A6A-219ENST00000533660 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
MS4A6A-219ENST00000533660 PROCA1Q8NCQ7 364 aaPredicted RBP7.78□□□□□ -1.16
MS4A6A-219ENST00000533660 ITPKCQ96DU7 683 aa7.78□□□□□ -1.16
MS4A6A-219ENST00000533660 EMILIN1Q9Y6C2 1016 aa7.78□□□□□ -1.16
MS4A6A-219ENST00000533660 MEIOBQ8N635 442 aa7.77□□□□□ -1.17
MS4A6A-219ENST00000533660 FSHRP23945 695 aa7.76□□□□□ -1.17
MS4A6A-219ENST00000533660 CCDC116Q8IYX3 515 aa7.76□□□□□ -1.17
MS4A6A-219ENST00000533660 LRRN4Q8WUT4 740 aa7.76□□□□□ -1.17
MS4A6A-219ENST00000533660 ARHGAP9Q9BRR9 750 aa7.76□□□□□ -1.17
MS4A6A-219ENST00000533660 MAGEB6P1A0A0J9YX57 407 aa7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 H3BM21 787 aa7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 UPP2O95045 317 aa7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 PTK2Q05397 1052 aa7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 LCE2CQ5TA81 110 aa7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 FBXO31Q5XUX0 539 aaPredicted RBP7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 IRF7Q92985 503 aa7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 PURBQ96QR8 312 aaKnown RBP7.75□□□□□ -1.17
MS4A6A-219ENST00000533660 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms