RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 CABLES1Q8TDN4 633 aa24.13■■□□□ 1.45
CTSB-229ENST00000533572 MARF1Q9Y4F3 1742 aaKnown RBP24.13■■□□□ 1.45
CTSB-229ENST00000533572 QTRT2Q9H974 415 aaKnown RBP24.12■■□□□ 1.45
CTSB-229ENST00000533572 FNBP4Q8N3X1 1017 aaPredicted RBP24.11■■□□□ 1.45
CTSB-229ENST00000533572 SBNO2Q9Y2G9 1366 aa24.11■■□□□ 1.45
CTSB-229ENST00000533572 ALS2Q96Q42 1657 aa24.11■■□□□ 1.45
CTSB-229ENST00000533572 TRPC5Q9UL62 973 aaPredicted RBP24.1■■□□□ 1.45
CTSB-229ENST00000533572 CABP1Q9NZU7 370 aa24.09■■□□□ 1.45
CTSB-229ENST00000533572 ATAD2Q6PL18 1390 aa24.08■■□□□ 1.45
CTSB-229ENST00000533572 RBM6P78332 1123 aaKnown RBP24.08■■□□□ 1.45
CTSB-229ENST00000533572 ABCA3Q99758 1704 aa24.07■■□□□ 1.44
CTSB-229ENST00000533572 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
CTSB-229ENST00000533572 BRD4O60885 1362 aaPredicted RBP24.04■■□□□ 1.44
CTSB-229ENST00000533572 CDK12Q9NYV4 1490 aaPredicted RBP24.04■■□□□ 1.44
CTSB-229ENST00000533572 ABTB2Q8N961 1025 aa24.03■■□□□ 1.44
CTSB-229ENST00000533572 ATRNO75882 1429 aa24.02■■□□□ 1.44
CTSB-229ENST00000533572 HSPA5P11021 654 aaKnown RBP24.02■■□□□ 1.44
CTSB-229ENST00000533572 NUTM2GQ5VZR2 741 aa24.02■■□□□ 1.44
CTSB-229ENST00000533572 UNC5CLQ8IV45 518 aa24.02■■□□□ 1.44
CTSB-229ENST00000533572 BCL9LQ86UU0 1499 aa24.01■■□□□ 1.43
CTSB-229ENST00000533572 SLIT2O94813 1529 aa24.01■■□□□ 1.43
CTSB-229ENST00000533572 USP6P35125 1406 aa24.01■■□□□ 1.43
CTSB-229ENST00000533572 ZNF692Q9BU19 519 aaPredicted RBP23.99■■□□□ 1.43
CTSB-229ENST00000533572 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.98■■□□□ 1.43
CTSB-229ENST00000533572 TMF1P82094 1093 aa23.98■■□□□ 1.43
CTSB-229ENST00000533572 NLRP13Q86W25 1043 aa23.98■■□□□ 1.43
CTSB-229ENST00000533572 TESK2Q96S53 571 aa23.98■■□□□ 1.43
CTSB-229ENST00000533572 PRDM11Q9NQV5 511 aa23.98■■□□□ 1.43
CTSB-229ENST00000533572 PLCH1Q4KWH8 1693 aa23.97■■□□□ 1.43
CTSB-229ENST00000533572 CDCA8Q53HL2 280 aa23.97■■□□□ 1.43
CTSB-229ENST00000533572 TMC1Q8TDI8 760 aa23.97■■□□□ 1.43
CTSB-229ENST00000533572 RGS12O14924 1447 aa23.96■■□□□ 1.43
CTSB-229ENST00000533572 FAM83GA6ND36 823 aa23.96■■□□□ 1.43
CTSB-229ENST00000533572 PUS7Q96PZ0 661 aaKnown RBP23.96■■□□□ 1.43
CTSB-229ENST00000533572 CCDC9Q9Y3X0 531 aaKnown RBP23.96■■□□□ 1.43
CTSB-229ENST00000533572 NWD2Q9ULI1 1742 aa23.96■■□□□ 1.43
CTSB-229ENST00000533572 CRYBG1Q9Y4K1 1723 aa23.96■■□□□ 1.43
CTSB-229ENST00000533572 GJD4Q96KN9 370 aaPredicted RBP23.95■■□□□ 1.42
CTSB-229ENST00000533572 PHRF1Q9P1Y6 1649 aaKnown RBP23.95■■□□□ 1.42
CTSB-229ENST00000533572 COL14A1Q05707 1796 aaKnown RBP23.94■■□□□ 1.42
CTSB-229ENST00000533572 KTN1Q86UP2 1357 aaKnown RBP23.93■■□□□ 1.42
CTSB-229ENST00000533572 HDGFL2Q7Z4V5 671 aaPredicted RBP23.93■■□□□ 1.42
CTSB-229ENST00000533572 BTG4Q9NY30 223 aa23.93■■□□□ 1.42
CTSB-229ENST00000533572 KIAA0232Q92628 1395 aa23.92■■□□□ 1.42
CTSB-229ENST00000533572 NLRP6P59044 892 aa23.92■■□□□ 1.42
CTSB-229ENST00000533572 ZC3H6P61129 1189 aaKnown RBP23.92■■□□□ 1.42
CTSB-229ENST00000533572 AKAP12Q02952 1782 aa23.92■■□□□ 1.42
CTSB-229ENST00000533572 USP19O94966 1318 aa23.91■■□□□ 1.42
CTSB-229ENST00000533572 VPS72Q15906 364 aa23.91■■□□□ 1.42
CTSB-229ENST00000533572 TTC21BQ7Z4L5 1316 aa23.9■■□□□ 1.42
CTSB-229ENST00000533572 TTC21AQ8NDW8 1320 aa23.9■■□□□ 1.42
CTSB-229ENST00000533572 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
CTSB-229ENST00000533572 TERF2IPQ9NYB0 399 aa23.89■■□□□ 1.41
CTSB-229ENST00000533572 SSH2Q76I76 1423 aa23.89■■□□□ 1.41
CTSB-229ENST00000533572 NRKQ7Z2Y5 1582 aa23.89■■□□□ 1.41
CTSB-229ENST00000533572 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
CTSB-229ENST00000533572 NINLQ9Y2I6 1382 aa23.88■■□□□ 1.41
CTSB-229ENST00000533572 GCP02774 474 aa23.87■■□□□ 1.41
CTSB-229ENST00000533572 SLC12A5Q9H2X9 1139 aa23.87■■□□□ 1.41
CTSB-229ENST00000533572 PIK3C2AO00443 1686 aa23.86■■□□□ 1.41
CTSB-229ENST00000533572 MON2Q7Z3U7 1717 aa23.85■■□□□ 1.41
CTSB-229ENST00000533572 NRAPQ86VF7 1730 aa23.85■■□□□ 1.41
CTSB-229ENST00000533572 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
CTSB-229ENST00000533572 GLI3P10071 1580 aa23.85■■□□□ 1.41
CTSB-229ENST00000533572 CPDO75976 1380 aa23.84■■□□□ 1.41
CTSB-229ENST00000533572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
CTSB-229ENST00000533572 A0A0G2JS52 829 aa23.83■■□□□ 1.41
CTSB-229ENST00000533572 MYT1Q01538 1121 aa23.83■■□□□ 1.41
CTSB-229ENST00000533572 UPF1Q92900 1129 aaKnown RBP eCLIP23.83■■□□□ 1.41
CTSB-229ENST00000533572 STRN4Q9NRL3 753 aa23.83■■□□□ 1.41
CTSB-229ENST00000533572 EVA1CP58658 441 aa23.82■■□□□ 1.4
CTSB-229ENST00000533572 SLIT3O75094 1523 aa23.82■■□□□ 1.4
CTSB-229ENST00000533572 CD163L1Q9NR16 1453 aa23.81■■□□□ 1.4
CTSB-229ENST00000533572 A0A1W2PP64 1363 aa23.81■■□□□ 1.4
CTSB-229ENST00000533572 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
CTSB-229ENST00000533572 EDC4Q6P2E9 1401 aaKnown RBP23.81■■□□□ 1.4
CTSB-229ENST00000533572 SOX12O15370 315 aa23.79■■□□□ 1.4
CTSB-229ENST00000533572 SEPT12Q8IYM1 358 aa23.78■■□□□ 1.4
CTSB-229ENST00000533572 SPATA31A5Q5VU36 1347 aa23.78■■□□□ 1.4
CTSB-229ENST00000533572 SPATA31A7Q8IWB4 1347 aa23.78■■□□□ 1.4
CTSB-229ENST00000533572 FAM98CQ17RN3 349 aaKnown RBP23.77■■□□□ 1.4
CTSB-229ENST00000533572 NME9Q86XW9 330 aa23.76■■□□□ 1.39
CTSB-229ENST00000533572 USP31Q70CQ4 1352 aa23.75■■□□□ 1.39
CTSB-229ENST00000533572 ANKRD36BQ8N2N9 1353 aa23.75■■□□□ 1.39
CTSB-229ENST00000533572 KIF7Q2M1P5 1343 aa23.74■■□□□ 1.39
CTSB-229ENST00000533572 AATKQ6ZMQ8 1374 aa23.74■■□□□ 1.39
CTSB-229ENST00000533572 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
CTSB-229ENST00000533572 CAMTA1Q9Y6Y1 1673 aa23.73■■□□□ 1.39
CTSB-229ENST00000533572 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
CTSB-229ENST00000533572 ONECUT3O60422 494 aaPredicted RBP23.73■■□□□ 1.39
CTSB-229ENST00000533572 CCDC7Q96M83 1385 aa23.73■■□□□ 1.39
CTSB-229ENST00000533572 C11orf95C9JLR9 678 aaPredicted RBP23.72■■□□□ 1.39
CTSB-229ENST00000533572 POLR3GLQ9BT43 218 aa23.72■■□□□ 1.39
CTSB-229ENST00000533572 USP35Q9P2H5 1018 aa23.72■■□□□ 1.39
CTSB-229ENST00000533572 ZRANB1Q9UGI0 708 aa23.72■■□□□ 1.39
CTSB-229ENST00000533572 SPATA31A1Q5TZJ5 1347 aa23.72■■□□□ 1.39
CTSB-229ENST00000533572 COL5A2P05997 1499 aaPredicted RBP23.7■■□□□ 1.38
CTSB-229ENST00000533572 WASHC2AQ641Q2 1341 aa23.7■■□□□ 1.38
CTSB-229ENST00000533572 LARP1Q6PKG0 1096 aaKnown RBP23.7■■□□□ 1.38
CTSB-229ENST00000533572 KRT27Q7Z3Y8 459 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms