RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 BTG4Q9NY30 223 aa17.83■□□□□ 0.44
CAPRIN1-213ENST00000533562 TRPM3Q9HCF6 1732 aaPredicted RBP17.83■□□□□ 0.44
CAPRIN1-213ENST00000533562 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
CAPRIN1-213ENST00000533562 SEPT12Q8IYM1 358 aa17.82■□□□□ 0.44
CAPRIN1-213ENST00000533562 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
CAPRIN1-213ENST00000533562 NWD2Q9ULI1 1742 aa17.81■□□□□ 0.44
CAPRIN1-213ENST00000533562 ALS2Q96Q42 1657 aa17.8■□□□□ 0.44
CAPRIN1-213ENST00000533562 POLR3AO14802 1390 aaPredicted RBP17.8■□□□□ 0.44
CAPRIN1-213ENST00000533562 PRDM11Q9NQV5 511 aa17.8■□□□□ 0.44
CAPRIN1-213ENST00000533562 GLI3P10071 1580 aa17.79■□□□□ 0.44
CAPRIN1-213ENST00000533562 ABCA3Q99758 1704 aa17.78■□□□□ 0.44
CAPRIN1-213ENST00000533562 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
CAPRIN1-213ENST00000533562 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
CAPRIN1-213ENST00000533562 SRCAPQ6ZRS2 3230 aa17.77■□□□□ 0.44
CAPRIN1-213ENST00000533562 PLCH1Q4KWH8 1693 aa17.77■□□□□ 0.44
CAPRIN1-213ENST00000533562 A0A0G2JS52 829 aa17.77■□□□□ 0.44
CAPRIN1-213ENST00000533562 MYT1Q01538 1121 aa17.77■□□□□ 0.44
CAPRIN1-213ENST00000533562 NUTM2GQ5VZR2 741 aa17.77■□□□□ 0.44
CAPRIN1-213ENST00000533562 KRT27Q7Z3Y8 459 aa17.76■□□□□ 0.43
CAPRIN1-213ENST00000533562 FAM98CQ17RN3 349 aaKnown RBP17.75■□□□□ 0.43
CAPRIN1-213ENST00000533562 COL14A1Q05707 1796 aaKnown RBP17.75■□□□□ 0.43
CAPRIN1-213ENST00000533562 ROCK2O75116 1388 aaKnown RBP17.75■□□□□ 0.43
CAPRIN1-213ENST00000533562 EVC2Q86UK5 1308 aa17.74■□□□□ 0.43
CAPRIN1-213ENST00000533562 PPIP5K1Q6PFW1 1433 aa17.74■□□□□ 0.43
CAPRIN1-213ENST00000533562 ZC3H6P61129 1189 aaKnown RBP17.74■□□□□ 0.43
CAPRIN1-213ENST00000533562 SF3B2Q13435 895 aaKnown RBP17.74■□□□□ 0.43
CAPRIN1-213ENST00000533562 CABP1Q9NZU7 370 aa17.74■□□□□ 0.43
CAPRIN1-213ENST00000533562 KIAA0232Q92628 1395 aa17.74■□□□□ 0.43
CAPRIN1-213ENST00000533562 SPATA31A5Q5VU36 1347 aa17.73■□□□□ 0.43
CAPRIN1-213ENST00000533562 SPATA31A7Q8IWB4 1347 aa17.73■□□□□ 0.43
CAPRIN1-213ENST00000533562 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
CAPRIN1-213ENST00000533562 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
CAPRIN1-213ENST00000533562 BRD4O60885 1362 aaPredicted RBP17.73■□□□□ 0.43
CAPRIN1-213ENST00000533562 CHRNA2Q15822 529 aa17.72■□□□□ 0.43
CAPRIN1-213ENST00000533562 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
CAPRIN1-213ENST00000533562 TOPAZ1Q8N9V7 1692 aa17.71■□□□□ 0.43
CAPRIN1-213ENST00000533562 EVA1CP58658 441 aa17.71■□□□□ 0.43
CAPRIN1-213ENST00000533562 STRN4Q9NRL3 753 aa17.7■□□□□ 0.42
CAPRIN1-213ENST00000533562 BRWD3Q6RI45 1802 aa17.7■□□□□ 0.42
CAPRIN1-213ENST00000533562 QRICH2Q9H0J4 1663 aa17.69■□□□□ 0.42
CAPRIN1-213ENST00000533562 GCP02774 474 aa17.69■□□□□ 0.42
CAPRIN1-213ENST00000533562 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
CAPRIN1-213ENST00000533562 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
CAPRIN1-213ENST00000533562 NRAPQ86VF7 1730 aa17.68■□□□□ 0.42
CAPRIN1-213ENST00000533562 ZNF692Q9BU19 519 aaPredicted RBP17.68■□□□□ 0.42
CAPRIN1-213ENST00000533562 SPATA31A1Q5TZJ5 1347 aa17.68■□□□□ 0.42
CAPRIN1-213ENST00000533562 NLRP6P59044 892 aa17.67■□□□□ 0.42
CAPRIN1-213ENST00000533562 USP19O94966 1318 aa17.67■□□□□ 0.42
CAPRIN1-213ENST00000533562 CPDO75976 1380 aa17.66■□□□□ 0.42
CAPRIN1-213ENST00000533562 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
CAPRIN1-213ENST00000533562 DEFB132Q7Z7B7 95 aa17.65■□□□□ 0.42
CAPRIN1-213ENST00000533562 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
CAPRIN1-213ENST00000533562 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
CAPRIN1-213ENST00000533562 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
CAPRIN1-213ENST00000533562 USP6P35125 1406 aa17.64■□□□□ 0.42
CAPRIN1-213ENST00000533562 USP35Q9P2H5 1018 aa17.64■□□□□ 0.41
CAPRIN1-213ENST00000533562 BAG6P46379 1132 aa17.62■□□□□ 0.41
CAPRIN1-213ENST00000533562 BARGINQ6ZT62 677 aa17.62■□□□□ 0.41
CAPRIN1-213ENST00000533562 LARP1Q6PKG0 1096 aaKnown RBP17.61■□□□□ 0.41
CAPRIN1-213ENST00000533562 TCP11L2Q8N4U5 519 aa17.61■□□□□ 0.41
CAPRIN1-213ENST00000533562 THRAP3Q9Y2W1 955 aaKnown RBP17.61■□□□□ 0.41
CAPRIN1-213ENST00000533562 SSH2Q76I76 1423 aa17.61■□□□□ 0.41
CAPRIN1-213ENST00000533562 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
CAPRIN1-213ENST00000533562 PDE3BQ13370 1112 aa17.6■□□□□ 0.41
CAPRIN1-213ENST00000533562 FAM182BQ5T319 152 aa17.6■□□□□ 0.41
CAPRIN1-213ENST00000533562 FAM196AQ6ZSG2 479 aa17.6■□□□□ 0.41
CAPRIN1-213ENST00000533562 CAMTA1Q9Y6Y1 1673 aa17.59■□□□□ 0.41
CAPRIN1-213ENST00000533562 NRKQ7Z2Y5 1582 aa17.59■□□□□ 0.41
CAPRIN1-213ENST00000533562 SBNO2Q9Y2G9 1366 aa17.59■□□□□ 0.41
CAPRIN1-213ENST00000533562 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
CAPRIN1-213ENST00000533562 TTC21AQ8NDW8 1320 aa17.59■□□□□ 0.41
CAPRIN1-213ENST00000533562 KCNH5Q8NCM2 988 aa17.59■□□□□ 0.41
CAPRIN1-213ENST00000533562 AATKQ6ZMQ8 1374 aa17.57■□□□□ 0.4
CAPRIN1-213ENST00000533562 KTN1Q86UP2 1357 aaKnown RBP17.57■□□□□ 0.4
CAPRIN1-213ENST00000533562 THSD7AQ9UPZ6 1657 aa17.57■□□□□ 0.4
CAPRIN1-213ENST00000533562 TMC1Q8TDI8 760 aa17.56■□□□□ 0.4
CAPRIN1-213ENST00000533562 SLC24A1O60721 1099 aa17.55■□□□□ 0.4
CAPRIN1-213ENST00000533562 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
CAPRIN1-213ENST00000533562 CPSF1Q10570 1443 aaKnown RBP17.55■□□□□ 0.4
CAPRIN1-213ENST00000533562 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
CAPRIN1-213ENST00000533562 COL5A2P05997 1499 aaPredicted RBP17.54■□□□□ 0.4
CAPRIN1-213ENST00000533562 LMO7Q8WWI1 1683 aa17.54■□□□□ 0.4
CAPRIN1-213ENST00000533562 SLIT3O75094 1523 aa17.53■□□□□ 0.4
CAPRIN1-213ENST00000533562 TRIM37O94972 964 aa17.53■□□□□ 0.4
CAPRIN1-213ENST00000533562 TOM1L2Q6ZVM7 507 aa17.53■□□□□ 0.4
CAPRIN1-213ENST00000533562 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
CAPRIN1-213ENST00000533562 ARHGEF25Q86VW2 580 aa17.53■□□□□ 0.4
CAPRIN1-213ENST00000533562 CRB1P82279 1406 aa17.53■□□□□ 0.4
CAPRIN1-213ENST00000533562 C11orf95C9JLR9 678 aaPredicted RBP17.52■□□□□ 0.4
CAPRIN1-213ENST00000533562 SOX12O15370 315 aa17.52■□□□□ 0.4
CAPRIN1-213ENST00000533562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.52■□□□□ 0.4
CAPRIN1-213ENST00000533562 AXIN2Q9Y2T1 843 aa17.52■□□□□ 0.4
CAPRIN1-213ENST00000533562 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
CAPRIN1-213ENST00000533562 TERF2IPQ9NYB0 399 aa17.51■□□□□ 0.39
CAPRIN1-213ENST00000533562 PIK3C2AO00443 1686 aa17.51■□□□□ 0.39
CAPRIN1-213ENST00000533562 APBA3O96018 575 aa17.5■□□□□ 0.39
CAPRIN1-213ENST00000533562 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
CAPRIN1-213ENST00000533562 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
CAPRIN1-213ENST00000533562 WDR17Q8IZU2 1322 aa17.49■□□□□ 0.39
CAPRIN1-213ENST00000533562 ST20-MTHFSA0A0A6YYL1 179 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms