RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 MINK1Q8N4C8 1332 aaPredicted RBP12.71□□□□□ -0.37
COPB1-210ENST00000533533 PRR36Q9H6K5 1346 aa12.71□□□□□ -0.37
COPB1-210ENST00000533533 A0A0G2JS52 829 aa12.71□□□□□ -0.37
COPB1-210ENST00000533533 MYT1Q01538 1121 aa12.71□□□□□ -0.37
COPB1-210ENST00000533533 FAM98CQ17RN3 349 aaKnown RBP12.71□□□□□ -0.37
COPB1-210ENST00000533533 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
COPB1-210ENST00000533533 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.38
COPB1-210ENST00000533533 WASLO00401 505 aaPredicted RBP12.7□□□□□ -0.38
COPB1-210ENST00000533533 KDM2AQ9Y2K7 1162 aa12.7□□□□□ -0.38
COPB1-210ENST00000533533 CRYBG1Q9Y4K1 1723 aa12.69□□□□□ -0.38
COPB1-210ENST00000533533 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
COPB1-210ENST00000533533 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
COPB1-210ENST00000533533 SPATA31A5Q5VU36 1347 aa12.68□□□□□ -0.38
COPB1-210ENST00000533533 SPATA31A7Q8IWB4 1347 aa12.68□□□□□ -0.38
COPB1-210ENST00000533533 HRCP23327 699 aa12.68□□□□□ -0.38
COPB1-210ENST00000533533 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
COPB1-210ENST00000533533 BAG6P46379 1132 aa12.68□□□□□ -0.38
COPB1-210ENST00000533533 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
COPB1-210ENST00000533533 LRP5O75197 1615 aa12.68□□□□□ -0.38
COPB1-210ENST00000533533 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
COPB1-210ENST00000533533 RGPD1P0DJD0 1748 aa12.67□□□□□ -0.38
COPB1-210ENST00000533533 ITSN1Q15811 1721 aa12.67□□□□□ -0.38
COPB1-210ENST00000533533 ARHGEF28Q8N1W1 1705 aaKnown RBP12.66□□□□□ -0.38
COPB1-210ENST00000533533 PRDM11Q9NQV5 511 aa12.66□□□□□ -0.38
COPB1-210ENST00000533533 THSD7AQ9UPZ6 1657 aa12.65□□□□□ -0.38
COPB1-210ENST00000533533 PSDA5PKW4 1024 aaPredicted RBP12.65□□□□□ -0.38
COPB1-210ENST00000533533 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
COPB1-210ENST00000533533 ATP7BP35670 1465 aa12.65□□□□□ -0.38
COPB1-210ENST00000533533 EN1Q05925 392 aaPredicted RBP12.64□□□□□ -0.39
COPB1-210ENST00000533533 NUDT16Q96DE0 195 aaKnown RBP12.64□□□□□ -0.39
COPB1-210ENST00000533533 KIAA0232Q92628 1395 aa12.63□□□□□ -0.39
COPB1-210ENST00000533533 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
COPB1-210ENST00000533533 DISP2A7MBM2 1401 aa12.62□□□□□ -0.39
COPB1-210ENST00000533533 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
COPB1-210ENST00000533533 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
COPB1-210ENST00000533533 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
COPB1-210ENST00000533533 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
COPB1-210ENST00000533533 POLR3AO14802 1390 aaPredicted RBP12.6□□□□□ -0.39
COPB1-210ENST00000533533 ZC3H6P61129 1189 aaKnown RBP12.6□□□□□ -0.39
COPB1-210ENST00000533533 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
COPB1-210ENST00000533533 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
COPB1-210ENST00000533533 PCGF6Q9BYE7 350 aa12.6□□□□□ -0.39
COPB1-210ENST00000533533 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
COPB1-210ENST00000533533 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
COPB1-210ENST00000533533 TOPAZ1Q8N9V7 1692 aa12.6□□□□□ -0.39
COPB1-210ENST00000533533 R3HDM1Q15032 1099 aaKnown RBP12.59□□□□□ -0.39
COPB1-210ENST00000533533 NBPF8Q3BBV2 869 aa12.59□□□□□ -0.39
COPB1-210ENST00000533533 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
COPB1-210ENST00000533533 ACEP12821 1306 aa12.59□□□□□ -0.39
COPB1-210ENST00000533533 PLEKHG3A1L390 1219 aa12.58□□□□□ -0.4
COPB1-210ENST00000533533 TRIM37O94972 964 aa12.58□□□□□ -0.4
COPB1-210ENST00000533533 EZH2Q15910 746 aaKnown RBP12.58□□□□□ -0.4
COPB1-210ENST00000533533 CAMKK2Q96RR4 588 aa12.58□□□□□ -0.4
COPB1-210ENST00000533533 KIAA1210Q9ULL0 1709 aa12.58□□□□□ -0.4
COPB1-210ENST00000533533 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
COPB1-210ENST00000533533 EVA1CP58658 441 aa12.57□□□□□ -0.4
COPB1-210ENST00000533533 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
COPB1-210ENST00000533533 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
COPB1-210ENST00000533533 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
COPB1-210ENST00000533533 ABTB2Q8N961 1025 aa12.56□□□□□ -0.4
COPB1-210ENST00000533533 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
COPB1-210ENST00000533533 NRKQ7Z2Y5 1582 aa12.56□□□□□ -0.4
COPB1-210ENST00000533533 CPDO75976 1380 aa12.56□□□□□ -0.4
COPB1-210ENST00000533533 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
COPB1-210ENST00000533533 APBA3O96018 575 aa12.55□□□□□ -0.4
COPB1-210ENST00000533533 PDE3BQ13370 1112 aa12.55□□□□□ -0.4
COPB1-210ENST00000533533 LARP1Q6PKG0 1096 aaKnown RBP12.55□□□□□ -0.4
COPB1-210ENST00000533533 TCP11L2Q8N4U5 519 aa12.55□□□□□ -0.4
COPB1-210ENST00000533533 USP19O94966 1318 aa12.55□□□□□ -0.4
COPB1-210ENST00000533533 LMO7Q8WWI1 1683 aa12.54□□□□□ -0.4
COPB1-210ENST00000533533 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
COPB1-210ENST00000533533 GCP02774 474 aa12.53□□□□□ -0.4
COPB1-210ENST00000533533 NEUROD1Q13562 356 aa12.53□□□□□ -0.4
COPB1-210ENST00000533533 NLRP13Q86W25 1043 aa12.53□□□□□ -0.4
COPB1-210ENST00000533533 RREB1Q92766 1687 aa12.53□□□□□ -0.4
COPB1-210ENST00000533533 SRPK2P78362 688 aaKnown RBP12.52□□□□□ -0.41
COPB1-210ENST00000533533 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
COPB1-210ENST00000533533 PPIP5K1Q6PFW1 1433 aa12.52□□□□□ -0.41
COPB1-210ENST00000533533 NUP188Q5SRE5 1749 aa12.51□□□□□ -0.41
COPB1-210ENST00000533533 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
COPB1-210ENST00000533533 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
COPB1-210ENST00000533533 BRD4O60885 1362 aaPredicted RBP12.51□□□□□ -0.41
COPB1-210ENST00000533533 SIN3AQ96ST3 1273 aa12.5□□□□□ -0.41
COPB1-210ENST00000533533 CABP2Q9NPB3 220 aa12.5□□□□□ -0.41
COPB1-210ENST00000533533 COL5A2P05997 1499 aaPredicted RBP12.5□□□□□ -0.41
COPB1-210ENST00000533533 QRICH2Q9H0J4 1663 aa12.49□□□□□ -0.41
COPB1-210ENST00000533533 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
COPB1-210ENST00000533533 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
COPB1-210ENST00000533533 SBF2Q86WG5 1849 aa12.48□□□□□ -0.41
COPB1-210ENST00000533533 CRB1P82279 1406 aa12.48□□□□□ -0.41
COPB1-210ENST00000533533 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
COPB1-210ENST00000533533 CABP1Q9NZU7 370 aa12.48□□□□□ -0.41
COPB1-210ENST00000533533 USP6P35125 1406 aa12.47□□□□□ -0.41
COPB1-210ENST00000533533 AATKQ6ZMQ8 1374 aa12.47□□□□□ -0.41
COPB1-210ENST00000533533 NLRP6P59044 892 aa12.47□□□□□ -0.41
COPB1-210ENST00000533533 PEAK1Q9H792 1746 aa12.47□□□□□ -0.41
COPB1-210ENST00000533533 ZBTB7CA1YPR0 619 aa12.46□□□□□ -0.41
COPB1-210ENST00000533533 SLIT3O75094 1523 aa12.46□□□□□ -0.42
COPB1-210ENST00000533533 COL18A1P39060 1754 aa12.46□□□□□ -0.42
COPB1-210ENST00000533533 OVOS2A0A0G2JMS6 1433 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms