RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 ZNF511Q8NB15 262 aa5.85□□□□□ -1.47
ATM-220ENST00000533526 FKBPLQ9UIM3 349 aa5.85□□□□□ -1.47
ATM-220ENST00000533526 WNT7AO00755 349 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 SH3BP2P78314 561 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 PRR20EP86478 221 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 PRR20CP86479 221 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 PRR20DP86480 221 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 PRR20BP86481 221 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 PRR20AP86496 221 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 LAPTM4AQ15012 233 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 PDXDC2PQ6P474 469 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 BPHLQ86WA6 291 aaPredicted RBP5.84□□□□□ -1.47
ATM-220ENST00000533526 SNRKQ9NRH2 765 aa5.84□□□□□ -1.47
ATM-220ENST00000533526 VARSP26640 1264 aaKnown RBP5.83□□□□□ -1.48
ATM-220ENST00000533526 SKOR1P84550 965 aa5.83□□□□□ -1.48
ATM-220ENST00000533526 RC3H1Q5TC82 1133 aaKnown RBP5.83□□□□□ -1.48
ATM-220ENST00000533526 TRIM34Q9BYJ4 488 aa5.83□□□□□ -1.48
ATM-220ENST00000533526 HMX1Q9NP08 348 aaPredicted RBP5.83□□□□□ -1.48
ATM-220ENST00000533526 GPSM3Q9Y4H4 160 aa5.83□□□□□ -1.48
ATM-220ENST00000533526 GDF9O60383 454 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 PTK2Q05397 1052 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 FOXC1Q12948 553 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 AGERQ15109 404 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 LINC01559Q495D7 138 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 MTMR14Q8NCE2 650 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 EHBP1Q8NDI1 1231 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 EPS8L1Q8TE68 723 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 GJD4Q96KN9 370 aaPredicted RBP5.82□□□□□ -1.48
ATM-220ENST00000533526 IRX2Q9BZI1 471 aaPredicted RBP5.82□□□□□ -1.48
ATM-220ENST00000533526 PDZRN3Q9UPQ7 1066 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 NDUFB9Q9Y6M9 179 aa5.82□□□□□ -1.48
ATM-220ENST00000533526 GFRA3O60609 400 aa5.81□□□□□ -1.48
ATM-220ENST00000533526 SH3BP5LQ7L8J4 393 aa5.81□□□□□ -1.48
ATM-220ENST00000533526 CYP4X1Q8N118 509 aa5.81□□□□□ -1.48
ATM-220ENST00000533526 PKD2L1Q9P0L9 805 aa5.81□□□□□ -1.48
ATM-220ENST00000533526 NRG2O14511 850 aaPredicted RBP5.8□□□□□ -1.48
ATM-220ENST00000533526 MCM6Q14566 821 aa5.8□□□□□ -1.48
ATM-220ENST00000533526 SH3RF1Q7Z6J0 888 aa5.8□□□□□ -1.48
ATM-220ENST00000533526 MPNDQ8N594 471 aa5.8□□□□□ -1.48
ATM-220ENST00000533526 SNIP1Q8TAD8 396 aaKnown RBP5.8□□□□□ -1.48
ATM-220ENST00000533526 FAM174AQ8TBP5 190 aa5.8□□□□□ -1.48
ATM-220ENST00000533526 MRGPRX2Q96LB1 330 aa5.8□□□□□ -1.48
ATM-220ENST00000533526 TTC24A2A3L6 582 aaPredicted RBP5.79□□□□□ -1.48
ATM-220ENST00000533526 SIAH2O43255 324 aa5.79□□□□□ -1.48
ATM-220ENST00000533526 RAD21O60216 631 aa5.79□□□□□ -1.48
ATM-220ENST00000533526 TRIM67Q6ZTA4 783 aa5.79□□□□□ -1.48
ATM-220ENST00000533526 ZBTB33Q86T24 672 aa5.79□□□□□ -1.48
ATM-220ENST00000533526 ZNF592Q92610 1267 aa5.79□□□□□ -1.48
ATM-220ENST00000533526 FOXJ1Q92949 421 aa5.79□□□□□ -1.48
ATM-220ENST00000533526 ARHGAP9Q9BRR9 750 aa5.79□□□□□ -1.48
ATM-220ENST00000533526 TNFRSF10AO00220 468 aa5.78□□□□□ -1.48
ATM-220ENST00000533526 MCCD1P59942 119 aaPredicted RBP5.78□□□□□ -1.48
ATM-220ENST00000533526 WWC1Q8IX03 1113 aa5.78□□□□□ -1.48
ATM-220ENST00000533526 TOR4AQ9NXH8 423 aa5.78□□□□□ -1.48
ATM-220ENST00000533526 CDV3Q9UKY7 258 aaKnown RBP5.78□□□□□ -1.48
ATM-220ENST00000533526 ZNF330Q9Y3S2 320 aaPredicted RBP5.78□□□□□ -1.48
ATM-220ENST00000533526 GTF3C3Q9Y5Q9 886 aa5.78□□□□□ -1.48
ATM-220ENST00000533526 MAGEB6P1A0A0J9YX57 407 aa5.77□□□□□ -1.49
ATM-220ENST00000533526 ZBBXA8MT70 800 aa5.77□□□□□ -1.49
ATM-220ENST00000533526 CDK15Q96Q40 435 aa5.77□□□□□ -1.49
ATM-220ENST00000533526 DGAT1O75907 488 aa5.76□□□□□ -1.49
ATM-220ENST00000533526 UBTFP17480 764 aaKnown RBP5.76□□□□□ -1.49
ATM-220ENST00000533526 WASHC4Q2M389 1173 aa5.76□□□□□ -1.49
ATM-220ENST00000533526 C4orf48Q5BLP8 95 aa5.76□□□□□ -1.49
ATM-220ENST00000533526 TRMT44Q8IYL2 757 aaKnown RBP5.76□□□□□ -1.49
ATM-220ENST00000533526 C1QTNF2Q9BXJ5 285 aa5.76□□□□□ -1.49
ATM-220ENST00000533526 NR1H3Q13133 447 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 PKDCCQ504Y2 493 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 ADAM32Q8TC27 787 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 GDPD2Q9HCC8 539 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 TBC1D2BQ9UPU7 963 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 COG6Q9Y2V7 657 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 MAP4K5Q9Y4K4 846 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 WASF2Q9Y6W5 498 aa5.75□□□□□ -1.49
ATM-220ENST00000533526 ALDH1A1P00352 501 aa5.74□□□□□ -1.49
ATM-220ENST00000533526 ARID5BQ14865 1188 aa5.74□□□□□ -1.49
ATM-220ENST00000533526 ERFEQ4G0M1 354 aa5.74□□□□□ -1.49
ATM-220ENST00000533526 DZIP3Q86Y13 1208 aaKnown RBP5.74□□□□□ -1.49
ATM-220ENST00000533526 TRIM52Q96A61 297 aa5.74□□□□□ -1.49
ATM-220ENST00000533526 SLC10A4Q96EP9 437 aa5.74□□□□□ -1.49
ATM-220ENST00000533526 CARD14Q9BXL6 1004 aa5.74□□□□□ -1.49
ATM-220ENST00000533526 FAM187AA6NFU0 413 aa5.73□□□□□ -1.49
ATM-220ENST00000533526 FBXO45P0C2W1 286 aa5.73□□□□□ -1.49
ATM-220ENST00000533526 ABL2P42684 1182 aa5.73□□□□□ -1.49
ATM-220ENST00000533526 EIF4G2P78344 907 aaKnown RBP eCLIP5.73□□□□□ -1.49
ATM-220ENST00000533526 NR5A1Q13285 461 aa5.73□□□□□ -1.49
ATM-220ENST00000533526 VASH1Q7L8A9 365 aaPredicted RBP5.73□□□□□ -1.49
ATM-220ENST00000533526 CCDC125Q86Z20 511 aa5.73□□□□□ -1.49
ATM-220ENST00000533526 OCSTAMPQ9BR26 566 aa5.73□□□□□ -1.49
ATM-220ENST00000533526 J3QL48 77 aa5.72□□□□□ -1.49
ATM-220ENST00000533526 GPR37L1O60883 481 aa5.72□□□□□ -1.49
ATM-220ENST00000533526 ADH1CP00326 375 aa5.72□□□□□ -1.49
ATM-220ENST00000533526 SMPD1P17405 629 aa5.72□□□□□ -1.49
ATM-220ENST00000533526 NBPF20Q3BBV1 942 aa5.72□□□□□ -1.49
ATM-220ENST00000533526 A6NJR5 290 aa5.71□□□□□ -1.5
ATM-220ENST00000533526 AVPP01185 164 aa5.71□□□□□ -1.5
ATM-220ENST00000533526 SOX11P35716 441 aa5.71□□□□□ -1.5
ATM-220ENST00000533526 GRM5P41594 1212 aa5.71□□□□□ -1.5
ATM-220ENST00000533526 IRF5Q13568 498 aa5.71□□□□□ -1.5
ATM-220ENST00000533526 CTC1Q2NKJ3 1217 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms