RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 SSH2Q76I76 1423 aa29.22■■■□□ 2.27
VPS51-211ENST00000533487 MEX3CQ5U5Q3 659 aaKnown RBP29.22■■■□□ 2.27
VPS51-211ENST00000533487 TMC1Q8TDI8 760 aa29.22■■■□□ 2.27
VPS51-211ENST00000533487 ABCA3Q99758 1704 aa29.22■■■□□ 2.27
VPS51-211ENST00000533487 TTC21AQ8NDW8 1320 aa29.21■■■□□ 2.27
VPS51-211ENST00000533487 NUTM2BA6NNL0 878 aaPredicted RBP29.21■■■□□ 2.27
VPS51-211ENST00000533487 NUTM2EB1AL46 878 aaPredicted RBP29.21■■■□□ 2.27
VPS51-211ENST00000533487 LMOD2Q6P5Q4 547 aa29.21■■■□□ 2.27
VPS51-211ENST00000533487 NUTM2AQ8IVF1 878 aaPredicted RBP29.21■■■□□ 2.27
VPS51-211ENST00000533487 PHF23Q9BUL5 403 aaPredicted RBP29.21■■■□□ 2.27
VPS51-211ENST00000533487 KTN1Q86UP2 1357 aaKnown RBP29.21■■■□□ 2.27
VPS51-211ENST00000533487 NRKQ7Z2Y5 1582 aa29.21■■■□□ 2.27
VPS51-211ENST00000533487 CD163L1Q9NR16 1453 aa29.19■■■□□ 2.26
VPS51-211ENST00000533487 CRYBG1Q9Y4K1 1723 aa29.19■■■□□ 2.26
VPS51-211ENST00000533487 SLC12A5Q9H2X9 1139 aa29.18■■■□□ 2.26
VPS51-211ENST00000533487 ANKRD36BQ8N2N9 1353 aa29.16■■■□□ 2.26
VPS51-211ENST00000533487 ABTB2Q8N961 1025 aa29.16■■■□□ 2.26
VPS51-211ENST00000533487 EDC4Q6P2E9 1401 aaKnown RBP29.16■■■□□ 2.26
VPS51-211ENST00000533487 ZEB1P37275 1124 aaPredicted RBP29.15■■■□□ 2.26
VPS51-211ENST00000533487 HAP1P54257 671 aaPredicted RBP29.15■■■□□ 2.26
VPS51-211ENST00000533487 NLRP13Q86W25 1043 aa29.15■■■□□ 2.26
VPS51-211ENST00000533487 TTC21BQ7Z4L5 1316 aa29.15■■■□□ 2.26
VPS51-211ENST00000533487 A0A1W2PP64 1363 aa29.13■■■□□ 2.25
VPS51-211ENST00000533487 MYOM1P52179 1685 aa29.13■■■□□ 2.25
VPS51-211ENST00000533487 PHRF1Q9P1Y6 1649 aaKnown RBP29.12■■■□□ 2.25
VPS51-211ENST00000533487 PIK3C2AO00443 1686 aa29.12■■■□□ 2.25
VPS51-211ENST00000533487 USP54Q70EL1 1684 aa29.12■■■□□ 2.25
VPS51-211ENST00000533487 ZNF772Q68DY9 489 aaPredicted RBP29.11■■■□□ 2.25
VPS51-211ENST00000533487 ADAMTS2O95450 1211 aa29.1■■■□□ 2.25
VPS51-211ENST00000533487 USP19O94966 1318 aa29.1■■■□□ 2.25
VPS51-211ENST00000533487 FNBP4Q8N3X1 1017 aaPredicted RBP29.07■■■□□ 2.24
VPS51-211ENST00000533487 NGLY1Q96IV0 654 aa29.07■■■□□ 2.24
VPS51-211ENST00000533487 C8orf37Q96NL8 207 aa29.07■■■□□ 2.24
VPS51-211ENST00000533487 NWD2Q9ULI1 1742 aa29.06■■■□□ 2.24
VPS51-211ENST00000533487 USP31Q70CQ4 1352 aa29.06■■■□□ 2.24
VPS51-211ENST00000533487 NLRP6P59044 892 aa29.06■■■□□ 2.24
VPS51-211ENST00000533487 CABLES1Q8TDN4 633 aa29.06■■■□□ 2.24
VPS51-211ENST00000533487 SLIT3O75094 1523 aa29.05■■■□□ 2.24
VPS51-211ENST00000533487 COL14A1Q05707 1796 aaKnown RBP29.04■■■□□ 2.24
VPS51-211ENST00000533487 AFF2P51816 1311 aa29.04■■■□□ 2.24
VPS51-211ENST00000533487 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.04■■■□□ 2.24
VPS51-211ENST00000533487 KCNH5Q8NCM2 988 aa29.02■■■□□ 2.24
VPS51-211ENST00000533487 RGS17Q9UGC6 210 aaPredicted RBP29.02■■■□□ 2.24
VPS51-211ENST00000533487 CPDO75976 1380 aa29.01■■■□□ 2.24
VPS51-211ENST00000533487 SLIT2O94813 1529 aa29.01■■■□□ 2.23
VPS51-211ENST00000533487 NUTM2GQ5VZR2 741 aa29■■■□□ 2.23
VPS51-211ENST00000533487 PLCH1Q4KWH8 1693 aa28.99■■■□□ 2.23
VPS51-211ENST00000533487 GCP02774 474 aa28.99■■■□□ 2.23
VPS51-211ENST00000533487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.99■■■□□ 2.23
VPS51-211ENST00000533487 USP21Q9UK80 565 aa28.97■■■□□ 2.23
VPS51-211ENST00000533487 PRDM11Q9NQV5 511 aa28.96■■■□□ 2.23
VPS51-211ENST00000533487 KIF7Q2M1P5 1343 aa28.95■■■□□ 2.23
VPS51-211ENST00000533487 KIF20BQ96Q89 1820 aa28.95■■■□□ 2.23
VPS51-211ENST00000533487 POLR3GLQ9BT43 218 aa28.95■■■□□ 2.22
VPS51-211ENST00000533487 BCL9LQ86UU0 1499 aa28.95■■■□□ 2.22
VPS51-211ENST00000533487 C11orf95C9JLR9 678 aaPredicted RBP28.94■■■□□ 2.22
VPS51-211ENST00000533487 TRPC5Q9UL62 973 aaPredicted RBP28.94■■■□□ 2.22
VPS51-211ENST00000533487 OVOS2A0A0J9YW53 1432 aa28.94■■■□□ 2.22
VPS51-211ENST00000533487 OVOS2Q6IE36 1432 aa28.94■■■□□ 2.22
VPS51-211ENST00000533487 KIAA0232Q92628 1395 aa28.93■■■□□ 2.22
VPS51-211ENST00000533487 FAM83GA6ND36 823 aa28.93■■■□□ 2.22
VPS51-211ENST00000533487 PLEKHG5O94827 1062 aa28.93■■■□□ 2.22
VPS51-211ENST00000533487 NME9Q86XW9 330 aa28.93■■■□□ 2.22
VPS51-211ENST00000533487 UNC5CLQ8IV45 518 aa28.93■■■□□ 2.22
VPS51-211ENST00000533487 ABCC6O95255 1503 aa28.92■■■□□ 2.22
VPS51-211ENST00000533487 NFAT5O94916 1531 aa28.9■■■□□ 2.22
VPS51-211ENST00000533487 ATRNO75882 1429 aa28.9■■■□□ 2.22
VPS51-211ENST00000533487 POTEAQ6S8J7 498 aa28.9■■■□□ 2.22
VPS51-211ENST00000533487 NRAPQ86VF7 1730 aa28.9■■■□□ 2.22
VPS51-211ENST00000533487 COG3Q96JB2 828 aa28.9■■■□□ 2.22
VPS51-211ENST00000533487 NSD3Q9BZ95 1437 aa28.9■■■□□ 2.22
VPS51-211ENST00000533487 QTRT2Q9H974 415 aaKnown RBP28.9■■■□□ 2.22
VPS51-211ENST00000533487 CGNL1Q0VF96 1302 aa28.9■■■□□ 2.22
VPS51-211ENST00000533487 CCDC7Q96M83 1385 aa28.89■■■□□ 2.22
VPS51-211ENST00000533487 ZC3H6P61129 1189 aaKnown RBP28.88■■■□□ 2.21
VPS51-211ENST00000533487 CARD14Q9BXL6 1004 aa28.88■■■□□ 2.21
VPS51-211ENST00000533487 CDK12Q9NYV4 1490 aaPredicted RBP28.88■■■□□ 2.21
VPS51-211ENST00000533487 LMO7Q8WWI1 1683 aa28.88■■■□□ 2.21
VPS51-211ENST00000533487 AATKQ6ZMQ8 1374 aa28.88■■■□□ 2.21
VPS51-211ENST00000533487 FYB1O15117 783 aa28.87■■■□□ 2.21
VPS51-211ENST00000533487 RBM6P78332 1123 aaKnown RBP28.87■■■□□ 2.21
VPS51-211ENST00000533487 PANK3Q9H999 370 aa28.86■■■□□ 2.21
VPS51-211ENST00000533487 RXRBP28702 533 aa28.85■■■□□ 2.21
VPS51-211ENST00000533487 ARHGEF25Q86VW2 580 aa28.85■■■□□ 2.21
VPS51-211ENST00000533487 BTG4Q9NY30 223 aa28.85■■■□□ 2.21
VPS51-211ENST00000533487 VPS72Q15906 364 aa28.84■■■□□ 2.21
VPS51-211ENST00000533487 NSD2O96028 1365 aa28.84■■■□□ 2.21
VPS51-211ENST00000533487 ANKRD26Q9UPS8 1709 aa28.83■■■□□ 2.21
VPS51-211ENST00000533487 WASHC2AQ641Q2 1341 aa28.83■■■□□ 2.21
VPS51-211ENST00000533487 LTN1O94822 1766 aa28.83■■■□□ 2.21
VPS51-211ENST00000533487 COL18A1P39060 1754 aa28.83■■■□□ 2.21
VPS51-211ENST00000533487 ZRANB1Q9UGI0 708 aa28.82■■■□□ 2.2
VPS51-211ENST00000533487 CHRNA2Q15822 529 aa28.79■■■□□ 2.2
VPS51-211ENST00000533487 GJD4Q96KN9 370 aaPredicted RBP28.79■■■□□ 2.2
VPS51-211ENST00000533487 CAMTA1Q9Y6Y1 1673 aa28.79■■■□□ 2.2
VPS51-211ENST00000533487 GGNBP2Q9H3C7 697 aa28.78■■■□□ 2.2
VPS51-211ENST00000533487 KNSTRNQ9Y448 316 aa28.78■■■□□ 2.2
VPS51-211ENST00000533487 KIF24Q5T7B8 1368 aa28.75■■■□□ 2.19
VPS51-211ENST00000533487 COL5A2P05997 1499 aaPredicted RBP28.75■■■□□ 2.19
VPS51-211ENST00000533487 EVA1CP58658 441 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms