RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 RPGRIP1LQ68CZ1 1315 aa7.09□□□□□ -1.27
CKAP5-212ENST00000533413 PLEKHG1Q9ULL1 1385 aa7.09□□□□□ -1.27
CKAP5-212ENST00000533413 RIMS2Q9UQ26 1411 aa7.09□□□□□ -1.27
CKAP5-212ENST00000533413 LAMC1P11047 1609 aa7.09□□□□□ -1.27
CKAP5-212ENST00000533413 IRF5Q13568 498 aa7.09□□□□□ -1.28
CKAP5-212ENST00000533413 IPO4Q8TEX9 1081 aaKnown RBP7.09□□□□□ -1.28
CKAP5-212ENST00000533413 MPHOSPH9Q99550 1183 aa7.09□□□□□ -1.28
CKAP5-212ENST00000533413 CCDC144AA2RUR9 1427 aa7.09□□□□□ -1.28
CKAP5-212ENST00000533413 LTBP4Q8N2S1 1624 aa7.08□□□□□ -1.28
CKAP5-212ENST00000533413 CCDC184Q52MB2 194 aa7.08□□□□□ -1.28
CKAP5-212ENST00000533413 SGSM3Q96HU1 749 aa7.08□□□□□ -1.28
CKAP5-212ENST00000533413 ANP32AP39687 249 aaKnown RBP7.08□□□□□ -1.28
CKAP5-212ENST00000533413 L3MBTL2Q969R5 705 aa7.08□□□□□ -1.28
CKAP5-212ENST00000533413 CHD2O14647 1828 aaKnown RBP7.07□□□□□ -1.28
CKAP5-212ENST00000533413 CCDC7Q96M83 1385 aa7.07□□□□□ -1.28
CKAP5-212ENST00000533413 RTL5Q5HYW3 569 aaPredicted RBP7.07□□□□□ -1.28
CKAP5-212ENST00000533413 FBXW7Q969H0 707 aa7.07□□□□□ -1.28
CKAP5-212ENST00000533413 TRAIPQ9BWF2 469 aa7.07□□□□□ -1.28
CKAP5-212ENST00000533413 NKTRP30414 1462 aaKnown RBP7.07□□□□□ -1.28
CKAP5-212ENST00000533413 PIK3R4Q99570 1358 aa7.07□□□□□ -1.28
CKAP5-212ENST00000533413 NCKAP5LQ9HCH0 1330 aa7.07□□□□□ -1.28
CKAP5-212ENST00000533413 SETQ01105 290 aaPredicted RBP7.07□□□□□ -1.28
CKAP5-212ENST00000533413 LAS1LQ9Y4W2 734 aaKnown RBP7.07□□□□□ -1.28
CKAP5-212ENST00000533413 NRXN3Q9Y4C0 1643 aa7.06□□□□□ -1.28
CKAP5-212ENST00000533413 MYOM2P54296 1465 aa7.06□□□□□ -1.28
CKAP5-212ENST00000533413 MAFGO15525 162 aa7.06□□□□□ -1.28
CKAP5-212ENST00000533413 NOL8Q76FK4 1167 aaKnown RBP7.06□□□□□ -1.28
CKAP5-212ENST00000533413 DNAJC2Q99543 621 aaKnown RBP7.06□□□□□ -1.28
CKAP5-212ENST00000533413 SETD1AO15047 1707 aaKnown RBP7.05□□□□□ -1.28
CKAP5-212ENST00000533413 CNGB1Q14028 1251 aaPredicted RBP7.05□□□□□ -1.28
CKAP5-212ENST00000533413 TXNDC2Q86VQ3 553 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 CLUAP1Q96AJ1 413 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 STAC3Q96MF2 364 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 SPATA31E1Q6ZUB1 1445 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 PATL2C9JE40 543 aaKnown RBP7.05□□□□□ -1.28
CKAP5-212ENST00000533413 TMTC2Q8N394 836 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 RETREG2Q8NC44 543 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 ZBTB47Q9UFB7 747 aaPredicted RBP7.05□□□□□ -1.28
CKAP5-212ENST00000533413 ANKRD30BQ9BXX2 1392 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 KNDC1Q76NI1 1749 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 PRAG1Q86YV5 1406 aa7.05□□□□□ -1.28
CKAP5-212ENST00000533413 ZC3H15Q8WU90 426 aaKnown RBP7.04□□□□□ -1.28
CKAP5-212ENST00000533413 WDR70Q9NW82 654 aa7.04□□□□□ -1.28
CKAP5-212ENST00000533413 STRCP1A6NGW2 1772 aa7.04□□□□□ -1.28
CKAP5-212ENST00000533413 XRN1Q8IZH2 1706 aaKnown RBP7.04□□□□□ -1.28
CKAP5-212ENST00000533413 RIPOR2Q9Y4F9 1068 aa7.04□□□□□ -1.28
CKAP5-212ENST00000533413 KIAA1210Q9ULL0 1709 aa7.04□□□□□ -1.28
CKAP5-212ENST00000533413 NCOA3Q9Y6Q9 1424 aa7.04□□□□□ -1.28
CKAP5-212ENST00000533413 FTSJ3Q8IY81 847 aaKnown RBP7.04□□□□□ -1.28
CKAP5-212ENST00000533413 EXOC8Q8IYI6 725 aa7.03□□□□□ -1.28
CKAP5-212ENST00000533413 NUDCQ9Y266 331 aa7.03□□□□□ -1.28
CKAP5-212ENST00000533413 NRXN1Q9ULB1 1477 aa7.03□□□□□ -1.28
CKAP5-212ENST00000533413 UNCXA6NJT0 531 aa7.02□□□□□ -1.29
CKAP5-212ENST00000533413 VGFO15240 615 aaPredicted RBP7.02□□□□□ -1.29
CKAP5-212ENST00000533413 PAK3O75914 559 aaPredicted RBP7.02□□□□□ -1.29
CKAP5-212ENST00000533413 MCCP23508 829 aa7.02□□□□□ -1.29
CKAP5-212ENST00000533413 LTKP29376 864 aa7.02□□□□□ -1.29
CKAP5-212ENST00000533413 IPO9Q96P70 1041 aaKnown RBP7.02□□□□□ -1.29
CKAP5-212ENST00000533413 KIF7Q2M1P5 1343 aa7.02□□□□□ -1.29
CKAP5-212ENST00000533413 XIRP1Q702N8 1843 aaKnown RBP7.02□□□□□ -1.29
CKAP5-212ENST00000533413 TBX22Q9Y458 520 aa7.02□□□□□ -1.29
CKAP5-212ENST00000533413 ADAMTS13Q76LX8 1427 aa7.02□□□□□ -1.29
CKAP5-212ENST00000533413 SMG6Q86US8 1419 aaKnown RBP7.02□□□□□ -1.29
CKAP5-212ENST00000533413 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
CKAP5-212ENST00000533413 CERKQ8TCT0 537 aa7.01□□□□□ -1.29
CKAP5-212ENST00000533413 ALKQ9UM73 1620 aa7.01□□□□□ -1.29
CKAP5-212ENST00000533413 FAM193AP78312 1265 aa7.01□□□□□ -1.29
CKAP5-212ENST00000533413 HSP90AB4PQ58FF6 505 aa7.01□□□□□ -1.29
CKAP5-212ENST00000533413 TMC1Q8TDI8 760 aa7.01□□□□□ -1.29
CKAP5-212ENST00000533413 LRRC7Q96NW7 1537 aa7.01□□□□□ -1.29
CKAP5-212ENST00000533413 MARCH6O60337 910 aa7□□□□□ -1.29
CKAP5-212ENST00000533413 PIK3C2GO75747 1445 aa7□□□□□ -1.29
CKAP5-212ENST00000533413 KCNA6P17658 529 aa7□□□□□ -1.29
CKAP5-212ENST00000533413 PTCH1Q13635 1447 aa7□□□□□ -1.29
CKAP5-212ENST00000533413 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
CKAP5-212ENST00000533413 FAM43AQ8N2R8 423 aa6.99□□□□□ -1.29
CKAP5-212ENST00000533413 ZNF335Q9H4Z2 1342 aaPredicted RBP6.99□□□□□ -1.29
CKAP5-212ENST00000533413 FBXO41Q8TF61 875 aa6.98□□□□□ -1.29
CKAP5-212ENST00000533413 SPINK5Q9NQ38 1064 aaPredicted RBP6.98□□□□□ -1.29
CKAP5-212ENST00000533413 DCCP43146 1447 aa6.98□□□□□ -1.29
CKAP5-212ENST00000533413 DLC1Q96QB1 1528 aa6.98□□□□□ -1.29
CKAP5-212ENST00000533413 TECPR2O15040 1411 aa6.97□□□□□ -1.29
CKAP5-212ENST00000533413 CDCA8Q53HL2 280 aa6.97□□□□□ -1.29
CKAP5-212ENST00000533413 STK24Q9Y6E0 443 aa6.97□□□□□ -1.29
CKAP5-212ENST00000533413 RNF123Q5XPI4 1314 aa6.97□□□□□ -1.29
CKAP5-212ENST00000533413 SENP3-EIF4A1A0A087X0R7 540 aa6.96□□□□□ -1.29
CKAP5-212ENST00000533413 HS6ST3Q8IZP7 471 aa6.96□□□□□ -1.29
CKAP5-212ENST00000533413 TCERG1O14776 1098 aaKnown RBP6.96□□□□□ -1.3
CKAP5-212ENST00000533413 FOSBP53539 338 aa6.96□□□□□ -1.3
CKAP5-212ENST00000533413 ZNF662Q6ZS27 426 aa6.96□□□□□ -1.3
CKAP5-212ENST00000533413 EVI5LQ96CN4 794 aa6.96□□□□□ -1.3
CKAP5-212ENST00000533413 SIRT1Q96EB6 747 aa6.96□□□□□ -1.3
CKAP5-212ENST00000533413 NALCNQ8IZF0 1738 aa6.96□□□□□ -1.3
CKAP5-212ENST00000533413 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.96□□□□□ -1.3
CKAP5-212ENST00000533413 PNISRQ8TF01 805 aaKnown RBP6.95□□□□□ -1.3
CKAP5-212ENST00000533413 RBM27Q9P2N5 1060 aaKnown RBP6.95□□□□□ -1.3
CKAP5-212ENST00000533413 CDC42BPGQ6DT37 1551 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 ASXL1Q8IXJ9 1541 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 SOX12O15370 315 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 SPTY2D1Q68D10 685 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms