RNA–Protein interactions for RNA: ENST00000533258.5

MMP8-206, Transcript of matrix metallopeptidase 8, humanhuman

TSL 3

Gene MMP8, Length 707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8-206ENST00000533258 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
MMP8-206ENST00000533258 GOLGB1Q14789 3259 aaKnown RBP13.13□□□□□ -0.31
MMP8-206ENST00000533258 ZBTB7AO95365 584 aa13.13□□□□□ -0.31
MMP8-206ENST00000533258 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
MMP8-206ENST00000533258 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
MMP8-206ENST00000533258 ARHGEF10O15013 1369 aa13.12□□□□□ -0.31
MMP8-206ENST00000533258 PSME1Q06323 249 aa13.12□□□□□ -0.31
MMP8-206ENST00000533258 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
MMP8-206ENST00000533258 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
MMP8-206ENST00000533258 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
MMP8-206ENST00000533258 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
MMP8-206ENST00000533258 ZBTB22O15209 634 aa13.1□□□□□ -0.31
MMP8-206ENST00000533258 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
MMP8-206ENST00000533258 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
MMP8-206ENST00000533258 VGFO15240 615 aaPredicted RBP13.09□□□□□ -0.31
MMP8-206ENST00000533258 HSPA6P17066 643 aa13.09□□□□□ -0.31
MMP8-206ENST00000533258 LMOD2Q6P5Q4 547 aa13.09□□□□□ -0.31
MMP8-206ENST00000533258 WAPLQ7Z5K2 1190 aa13.09□□□□□ -0.31
MMP8-206ENST00000533258 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
MMP8-206ENST00000533258 RGPD3A6NKT7 1758 aaPredicted RBP13.09□□□□□ -0.31
MMP8-206ENST00000533258 RGPD4Q7Z3J3 1758 aa13.09□□□□□ -0.31
MMP8-206ENST00000533258 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
MMP8-206ENST00000533258 CLTCL1P53675 1640 aa13.07□□□□□ -0.32
MMP8-206ENST00000533258 PLSCR1O15162 318 aa13.07□□□□□ -0.32
MMP8-206ENST00000533258 SLC34A2O95436 690 aa13.07□□□□□ -0.32
MMP8-206ENST00000533258 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
MMP8-206ENST00000533258 NUP155O75694 1391 aa13.07□□□□□ -0.32
MMP8-206ENST00000533258 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
MMP8-206ENST00000533258 TECPR2O15040 1411 aa13.06□□□□□ -0.32
MMP8-206ENST00000533258 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
MMP8-206ENST00000533258 BARGINQ6ZT62 677 aa13.05□□□□□ -0.32
MMP8-206ENST00000533258 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
MMP8-206ENST00000533258 GPR162Q16538 588 aa13.04□□□□□ -0.32
MMP8-206ENST00000533258 PROM2Q8N271 834 aa13.04□□□□□ -0.32
MMP8-206ENST00000533258 TRPM3Q9HCF6 1732 aaPredicted RBP13.03□□□□□ -0.32
MMP8-206ENST00000533258 CRYBG1Q9Y4K1 1723 aa13.03□□□□□ -0.32
MMP8-206ENST00000533258 MTFR1LQ9H019 292 aa13.03□□□□□ -0.32
MMP8-206ENST00000533258 KIF1BO60333 1816 aa13.03□□□□□ -0.32
MMP8-206ENST00000533258 ALS2Q96Q42 1657 aa13.02□□□□□ -0.32
MMP8-206ENST00000533258 ARXQ96QS3 562 aa13.01□□□□□ -0.33
MMP8-206ENST00000533258 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
MMP8-206ENST00000533258 SBF2Q86WG5 1849 aa13.01□□□□□ -0.33
MMP8-206ENST00000533258 PEAK1Q9H792 1746 aa13□□□□□ -0.33
MMP8-206ENST00000533258 ABCC11Q96J66 1382 aa13□□□□□ -0.33
MMP8-206ENST00000533258 COL13A1Q5TAT6 717 aaPredicted RBP13□□□□□ -0.33
MMP8-206ENST00000533258 BCL11BQ9C0K0 894 aaPredicted RBP13□□□□□ -0.33
MMP8-206ENST00000533258 STK26Q9P289 416 aa13□□□□□ -0.33
MMP8-206ENST00000533258 USP35Q9P2H5 1018 aa13□□□□□ -0.33
MMP8-206ENST00000533258 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
MMP8-206ENST00000533258 RPGRIP1LQ68CZ1 1315 aa12.99□□□□□ -0.33
MMP8-206ENST00000533258 CAPN15O75808 1086 aa12.99□□□□□ -0.33
MMP8-206ENST00000533258 PRELPP51888 382 aa12.99□□□□□ -0.33
MMP8-206ENST00000533258 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
MMP8-206ENST00000533258 STRN4Q9NRL3 753 aa12.99□□□□□ -0.33
MMP8-206ENST00000533258 C11orf95C9JLR9 678 aaPredicted RBP12.98□□□□□ -0.33
MMP8-206ENST00000533258 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
MMP8-206ENST00000533258 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
MMP8-206ENST00000533258 PPLO60437 1756 aa12.98□□□□□ -0.33
MMP8-206ENST00000533258 KNDC1Q76NI1 1749 aa12.97□□□□□ -0.33
MMP8-206ENST00000533258 CHRNA2Q15822 529 aa12.97□□□□□ -0.33
MMP8-206ENST00000533258 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
MMP8-206ENST00000533258 KIAA0232Q92628 1395 aa12.96□□□□□ -0.33
MMP8-206ENST00000533258 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
MMP8-206ENST00000533258 PMFBP1Q8TBY8 1022 aa12.96□□□□□ -0.33
MMP8-206ENST00000533258 PARP4Q9UKK3 1724 aaKnown RBP12.96□□□□□ -0.34
MMP8-206ENST00000533258 SSH2Q76I76 1423 aa12.96□□□□□ -0.34
MMP8-206ENST00000533258 ROCK1Q13464 1354 aa12.95□□□□□ -0.34
MMP8-206ENST00000533258 TCP11L2Q8N4U5 519 aa12.95□□□□□ -0.34
MMP8-206ENST00000533258 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
MMP8-206ENST00000533258 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
MMP8-206ENST00000533258 OVOS2A0A0G2JMS6 1433 aa12.94□□□□□ -0.34
MMP8-206ENST00000533258 OVOS2A0A0J9YW53 1432 aa12.94□□□□□ -0.34
MMP8-206ENST00000533258 OVOS2Q6IE36 1432 aa12.94□□□□□ -0.34
MMP8-206ENST00000533258 TMEM132EQ6IEE7 984 aa12.93□□□□□ -0.34
MMP8-206ENST00000533258 LARP1Q6PKG0 1096 aaKnown RBP12.93□□□□□ -0.34
MMP8-206ENST00000533258 SIRT1Q96EB6 747 aa12.93□□□□□ -0.34
MMP8-206ENST00000533258 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
MMP8-206ENST00000533258 TXNRD1Q16881 649 aa12.92□□□□□ -0.34
MMP8-206ENST00000533258 THRAP3Q9Y2W1 955 aaKnown RBP12.92□□□□□ -0.34
MMP8-206ENST00000533258 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
MMP8-206ENST00000533258 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
MMP8-206ENST00000533258 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
MMP8-206ENST00000533258 ATP7BP35670 1465 aa12.91□□□□□ -0.34
MMP8-206ENST00000533258 ACIN1Q9UKV3 1341 aaKnown RBP12.9□□□□□ -0.34
MMP8-206ENST00000533258 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
MMP8-206ENST00000533258 APLP1P51693 650 aa12.9□□□□□ -0.34
MMP8-206ENST00000533258 EVA1CP58658 441 aa12.9□□□□□ -0.34
MMP8-206ENST00000533258 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
MMP8-206ENST00000533258 ADCY9O60503 1353 aa12.9□□□□□ -0.34
MMP8-206ENST00000533258 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
MMP8-206ENST00000533258 YTHDC2Q9H6S0 1430 aaKnown RBP12.89□□□□□ -0.35
MMP8-206ENST00000533258 PCNTO95613 3336 aa12.89□□□□□ -0.35
MMP8-206ENST00000533258 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
MMP8-206ENST00000533258 ZC3H6P61129 1189 aaKnown RBP12.89□□□□□ -0.35
MMP8-206ENST00000533258 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
MMP8-206ENST00000533258 NLGN2Q8NFZ4 835 aa12.89□□□□□ -0.35
MMP8-206ENST00000533258 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
MMP8-206ENST00000533258 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
MMP8-206ENST00000533258 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
MMP8-206ENST00000533258 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms