RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 ABCC1P33527 1531 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 K7ELQ4 463 aaPredicted RBP11.64□□□□□ -0.55
BDNF-216ENST00000532997 CCDC173Q0VFZ6 552 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 TMEM57Q8N5G2 664 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 SNX21Q969T3 373 aa11.64□□□□□ -0.55
BDNF-216ENST00000532997 FANCAO15360 1455 aa11.63□□□□□ -0.55
BDNF-216ENST00000532997 ANKRD36BQ8N2N9 1353 aa11.63□□□□□ -0.55
BDNF-216ENST00000532997 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
BDNF-216ENST00000532997 TPM2P07951 284 aa11.63□□□□□ -0.55
BDNF-216ENST00000532997 TET3O43151 1660 aa11.63□□□□□ -0.55
BDNF-216ENST00000532997 USP19O94966 1318 aa11.63□□□□□ -0.55
BDNF-216ENST00000532997 HMMRO75330 724 aa11.63□□□□□ -0.55
BDNF-216ENST00000532997 RABEP1Q15276 862 aa11.62□□□□□ -0.55
BDNF-216ENST00000532997 SMC5Q8IY18 1101 aa11.62□□□□□ -0.55
BDNF-216ENST00000532997 BMP2KLQ5H9B9 411 aa11.62□□□□□ -0.55
BDNF-216ENST00000532997 NASPP49321 788 aaPredicted RBP11.62□□□□□ -0.55
BDNF-216ENST00000532997 SYAP1Q96A49 352 aaPredicted RBP11.62□□□□□ -0.55
BDNF-216ENST00000532997 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
BDNF-216ENST00000532997 RRP9O43818 475 aaKnown RBP11.61□□□□□ -0.55
BDNF-216ENST00000532997 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.61□□□□□ -0.55
BDNF-216ENST00000532997 NUTM2DQ5VT03 806 aaPredicted RBP11.61□□□□□ -0.55
BDNF-216ENST00000532997 INTS3Q68E01 1043 aaKnown RBP11.61□□□□□ -0.55
BDNF-216ENST00000532997 ANTXR1Q9H6X2 564 aa11.61□□□□□ -0.55
BDNF-216ENST00000532997 FCHSD2O94868 740 aa11.61□□□□□ -0.55
BDNF-216ENST00000532997 REC8O95072 547 aa11.61□□□□□ -0.55
BDNF-216ENST00000532997 SENP3Q9H4L4 574 aaPredicted RBP11.61□□□□□ -0.55
BDNF-216ENST00000532997 KIAA1210Q9ULL0 1709 aa11.61□□□□□ -0.55
BDNF-216ENST00000532997 CEP152O94986 1710 aa11.6□□□□□ -0.55
BDNF-216ENST00000532997 KIF1BO60333 1816 aa11.6□□□□□ -0.55
BDNF-216ENST00000532997 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
BDNF-216ENST00000532997 TNNQ9UQP3 1299 aa11.6□□□□□ -0.55
BDNF-216ENST00000532997 CLTCL1P53675 1640 aa11.6□□□□□ -0.55
BDNF-216ENST00000532997 NUCB1Q02818 461 aa11.6□□□□□ -0.55
BDNF-216ENST00000532997 TNPO1Q92973 898 aaKnown RBP11.59□□□□□ -0.55
BDNF-216ENST00000532997 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
BDNF-216ENST00000532997 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
BDNF-216ENST00000532997 RBM25P49756 843 aaKnown RBP11.58□□□□□ -0.56
BDNF-216ENST00000532997 CWC22Q9HCG8 908 aaKnown RBP11.58□□□□□ -0.56
BDNF-216ENST00000532997 RRAGDQ9NQL2 400 aaPredicted RBP11.58□□□□□ -0.56
BDNF-216ENST00000532997 ESF1Q9H501 851 aaKnown RBP11.57□□□□□ -0.56
BDNF-216ENST00000532997 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
BDNF-216ENST00000532997 DNTTIP2Q5QJE6 756 aaKnown RBP11.57□□□□□ -0.56
BDNF-216ENST00000532997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.57□□□□□ -0.56
BDNF-216ENST00000532997 FSD2A1L4K1 749 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 ELL2O00472 640 aaPredicted RBP11.56□□□□□ -0.56
BDNF-216ENST00000532997 PHF14O94880 888 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 ARHGAP45Q92619 1136 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 CSPP1Q1MSJ5 1256 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 MCTP1Q6DN14 999 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 PANK2Q9BZ23 570 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 ZFYVE16Q7Z3T8 1539 aa11.56□□□□□ -0.56
BDNF-216ENST00000532997 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
BDNF-216ENST00000532997 NFE2L2Q16236 605 aa11.55□□□□□ -0.56
BDNF-216ENST00000532997 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
BDNF-216ENST00000532997 VSIG10Q8N0Z9 540 aa11.55□□□□□ -0.56
BDNF-216ENST00000532997 RAB3GAP1Q15042 981 aa11.55□□□□□ -0.56
BDNF-216ENST00000532997 TWISTNBQ3B726 338 aaPredicted RBP11.55□□□□□ -0.56
BDNF-216ENST00000532997 APBB1O00213 710 aa11.54□□□□□ -0.56
BDNF-216ENST00000532997 ZSCAN30Q86W11 494 aa11.54□□□□□ -0.56
BDNF-216ENST00000532997 MAP7D2Q96T17 732 aa11.54□□□□□ -0.56
BDNF-216ENST00000532997 COG3Q96JB2 828 aa11.54□□□□□ -0.56
BDNF-216ENST00000532997 MBD3O95983 291 aa11.54□□□□□ -0.56
BDNF-216ENST00000532997 IFT57Q9NWB7 429 aa11.54□□□□□ -0.56
BDNF-216ENST00000532997 MCM2P49736 904 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 KIAA2012Q0VF49 1180 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 KLHL40Q2TBA0 621 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 C1orf115Q9H7X2 142 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 VIRMAQ69YN4 1812 aaKnown RBP11.53□□□□□ -0.56
BDNF-216ENST00000532997 PRAM1Q96QH2 718 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 ABCA6Q8N139 1617 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 NEURL4Q96JN8 1562 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
BDNF-216ENST00000532997 TBC1D9Q6ZT07 1266 aa11.53□□□□□ -0.56
BDNF-216ENST00000532997 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
BDNF-216ENST00000532997 HMOX1P09601 288 aa11.52□□□□□ -0.56
BDNF-216ENST00000532997 CAVIN1Q6NZI2 390 aaKnown RBP11.52□□□□□ -0.56
BDNF-216ENST00000532997 ZFYVE9O95405 1425 aa11.52□□□□□ -0.57
BDNF-216ENST00000532997 ZCCHC11Q5TAX3 1644 aaKnown RBP11.52□□□□□ -0.57
BDNF-216ENST00000532997 SETBP1Q9Y6X0 1596 aa11.51□□□□□ -0.57
BDNF-216ENST00000532997 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
BDNF-216ENST00000532997 MTERF4Q7Z6M4 381 aaKnown RBP11.51□□□□□ -0.57
BDNF-216ENST00000532997 STK31Q9BXU1 1019 aa11.51□□□□□ -0.57
BDNF-216ENST00000532997 CCDC39Q9UFE4 941 aa11.51□□□□□ -0.57
BDNF-216ENST00000532997 SSFA2P28290 1259 aa11.51□□□□□ -0.57
BDNF-216ENST00000532997 CDK19Q9BWU1 502 aa11.5□□□□□ -0.57
BDNF-216ENST00000532997 CHD1O14646 1710 aa11.5□□□□□ -0.57
BDNF-216ENST00000532997 BAG4O95429 457 aaKnown RBP11.5□□□□□ -0.57
BDNF-216ENST00000532997 EFCAB6Q5THR3 1501 aa11.5□□□□□ -0.57
BDNF-216ENST00000532997 KIAA1211Q6ZU35 1233 aa11.5□□□□□ -0.57
BDNF-216ENST00000532997 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
BDNF-216ENST00000532997 MYOM1P52179 1685 aa11.49□□□□□ -0.57
BDNF-216ENST00000532997 CABP1Q9NZU7 370 aa11.49□□□□□ -0.57
BDNF-216ENST00000532997 A0A1W2PP64 1363 aa11.49□□□□□ -0.57
BDNF-216ENST00000532997 FYB1O15117 783 aa11.49□□□□□ -0.57
BDNF-216ENST00000532997 IQSEC2Q5JU85 1478 aa11.49□□□□□ -0.57
BDNF-216ENST00000532997 ERC2O15083 957 aa11.49□□□□□ -0.57
BDNF-216ENST00000532997 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms