RNA–Protein interactions for RNA: ENST00000532931.5

ATM-219, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-219ENST00000532931 C11orf95C9JLR9 678 aaPredicted RBP17.31■□□□□ 0.36
ATM-219ENST00000532931 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
ATM-219ENST00000532931 FOXO3O43524 673 aa17.3■□□□□ 0.36
ATM-219ENST00000532931 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
ATM-219ENST00000532931 BRD4O60885 1362 aaPredicted RBP17.29■□□□□ 0.36
ATM-219ENST00000532931 ACEP12821 1306 aa17.29■□□□□ 0.36
ATM-219ENST00000532931 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
ATM-219ENST00000532931 COL22A1Q8NFW1 1626 aaPredicted RBP17.29■□□□□ 0.36
ATM-219ENST00000532931 SSH2Q76I76 1423 aa17.28■□□□□ 0.36
ATM-219ENST00000532931 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
ATM-219ENST00000532931 NGDNQ8NEJ9 315 aaKnown RBP17.27■□□□□ 0.36
ATM-219ENST00000532931 DDX17Q92841 729 aaKnown RBP17.27■□□□□ 0.36
ATM-219ENST00000532931 ZNF692Q9BU19 519 aaPredicted RBP17.27■□□□□ 0.36
ATM-219ENST00000532931 USP54Q70EL1 1684 aa17.26■□□□□ 0.35
ATM-219ENST00000532931 KRT28Q7Z3Y7 464 aa17.26■□□□□ 0.35
ATM-219ENST00000532931 SLC12A5Q9H2X9 1139 aa17.26■□□□□ 0.35
ATM-219ENST00000532931 USP6P35125 1406 aa17.26■□□□□ 0.35
ATM-219ENST00000532931 CRYBG1Q9Y4K1 1723 aa17.26■□□□□ 0.35
ATM-219ENST00000532931 KIF7Q2M1P5 1343 aa17.25■□□□□ 0.35
ATM-219ENST00000532931 PSME1Q06323 249 aa17.25■□□□□ 0.35
ATM-219ENST00000532931 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
ATM-219ENST00000532931 MARF1Q9Y4F3 1742 aaKnown RBP17.24■□□□□ 0.35
ATM-219ENST00000532931 ANKRD36BQ8N2N9 1353 aa17.24■□□□□ 0.35
ATM-219ENST00000532931 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
ATM-219ENST00000532931 ABCA3Q99758 1704 aa17.24■□□□□ 0.35
ATM-219ENST00000532931 SPATA31A3Q5VYP0 1347 aa17.23■□□□□ 0.35
ATM-219ENST00000532931 PIK3C2AO00443 1686 aa17.23■□□□□ 0.35
ATM-219ENST00000532931 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
ATM-219ENST00000532931 A0A1W2PP64 1363 aa17.23■□□□□ 0.35
ATM-219ENST00000532931 WASHC2AQ641Q2 1341 aa17.22■□□□□ 0.35
ATM-219ENST00000532931 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
ATM-219ENST00000532931 KIF20BQ96Q89 1820 aa17.22■□□□□ 0.35
ATM-219ENST00000532931 KTN1Q86UP2 1357 aaKnown RBP17.21■□□□□ 0.35
ATM-219ENST00000532931 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
ATM-219ENST00000532931 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.34
ATM-219ENST00000532931 PNPLA6Q8IY17 1366 aa17.2■□□□□ 0.34
ATM-219ENST00000532931 JCADQ9P266 1359 aa17.2■□□□□ 0.34
ATM-219ENST00000532931 XPCQ01831 940 aaPredicted RBP17.2■□□□□ 0.34
ATM-219ENST00000532931 HDGFL2Q7Z4V5 671 aaPredicted RBP17.2■□□□□ 0.34
ATM-219ENST00000532931 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
ATM-219ENST00000532931 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
ATM-219ENST00000532931 TTC21AQ8NDW8 1320 aa17.19■□□□□ 0.34
ATM-219ENST00000532931 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
ATM-219ENST00000532931 PHRF1Q9P1Y6 1649 aaKnown RBP17.18■□□□□ 0.34
ATM-219ENST00000532931 TTC21BQ7Z4L5 1316 aa17.17■□□□□ 0.34
ATM-219ENST00000532931 CAPN15O75808 1086 aa17.15■□□□□ 0.34
ATM-219ENST00000532931 CARD14Q9BXL6 1004 aa17.15■□□□□ 0.34
ATM-219ENST00000532931 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
ATM-219ENST00000532931 USP31Q70CQ4 1352 aa17.14■□□□□ 0.33
ATM-219ENST00000532931 SLIT3O75094 1523 aa17.13■□□□□ 0.33
ATM-219ENST00000532931 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
ATM-219ENST00000532931 PANK3Q9H999 370 aa17.13■□□□□ 0.33
ATM-219ENST00000532931 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
ATM-219ENST00000532931 USP19O94966 1318 aa17.12■□□□□ 0.33
ATM-219ENST00000532931 PER1O15534 1290 aaPredicted RBP17.11■□□□□ 0.33
ATM-219ENST00000532931 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
ATM-219ENST00000532931 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
ATM-219ENST00000532931 OVOS2A0A0J9YW53 1432 aa17.1■□□□□ 0.33
ATM-219ENST00000532931 OVOS2Q6IE36 1432 aa17.1■□□□□ 0.33
ATM-219ENST00000532931 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
ATM-219ENST00000532931 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
ATM-219ENST00000532931 LRP6O75581 1613 aa17.09■□□□□ 0.33
ATM-219ENST00000532931 MAP2P11137 1827 aaKnown RBP17.08■□□□□ 0.33
ATM-219ENST00000532931 LTN1O94822 1766 aa17.08■□□□□ 0.33
ATM-219ENST00000532931 FYB1O15117 783 aa17.08■□□□□ 0.32
ATM-219ENST00000532931 NFAT5O94916 1531 aa17.07■□□□□ 0.32
ATM-219ENST00000532931 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
ATM-219ENST00000532931 DSG3P32926 999 aa17.07■□□□□ 0.32
ATM-219ENST00000532931 NLRP6P59044 892 aa17.07■□□□□ 0.32
ATM-219ENST00000532931 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
ATM-219ENST00000532931 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
ATM-219ENST00000532931 NSD2O96028 1365 aa17.06■□□□□ 0.32
ATM-219ENST00000532931 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
ATM-219ENST00000532931 LMOD2Q6P5Q4 547 aa17.06■□□□□ 0.32
ATM-219ENST00000532931 NME9Q86XW9 330 aa17.06■□□□□ 0.32
ATM-219ENST00000532931 COL18A1P39060 1754 aa17.06■□□□□ 0.32
ATM-219ENST00000532931 COL14A1Q05707 1796 aaKnown RBP17.05■□□□□ 0.32
ATM-219ENST00000532931 NPC1L1Q9UHC9 1359 aa17.05■□□□□ 0.32
ATM-219ENST00000532931 ZNF772Q68DY9 489 aaPredicted RBP17.05■□□□□ 0.32
ATM-219ENST00000532931 PLCH1Q4KWH8 1693 aa17.04■□□□□ 0.32
ATM-219ENST00000532931 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
ATM-219ENST00000532931 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
ATM-219ENST00000532931 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
ATM-219ENST00000532931 RGPD5Q99666 1765 aa17.04■□□□□ 0.32
ATM-219ENST00000532931 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.04■□□□□ 0.32
ATM-219ENST00000532931 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
ATM-219ENST00000532931 CPDO75976 1380 aa17.03■□□□□ 0.32
ATM-219ENST00000532931 GCP02774 474 aa17.03■□□□□ 0.32
ATM-219ENST00000532931 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
ATM-219ENST00000532931 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
ATM-219ENST00000532931 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
ATM-219ENST00000532931 ABCC6O95255 1503 aa17.02■□□□□ 0.32
ATM-219ENST00000532931 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.32
ATM-219ENST00000532931 NUTM2BA6NNL0 878 aaPredicted RBP17.01■□□□□ 0.31
ATM-219ENST00000532931 NUTM2EB1AL46 878 aaPredicted RBP17.01■□□□□ 0.31
ATM-219ENST00000532931 NUTM2AQ8IVF1 878 aaPredicted RBP17.01■□□□□ 0.31
ATM-219ENST00000532931 COG3Q96JB2 828 aa17.01■□□□□ 0.31
ATM-219ENST00000532931 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
ATM-219ENST00000532931 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
ATM-219ENST00000532931 RXRBP28702 533 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms