RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
TRAF3IP2-212ENST00000532708 NINLQ9Y2I6 1382 aa16.53■□□□□ 0.24
TRAF3IP2-212ENST00000532708 NUTM2GQ5VZR2 741 aa16.53■□□□□ 0.24
TRAF3IP2-212ENST00000532708 MYOM1P52179 1685 aa16.53■□□□□ 0.24
TRAF3IP2-212ENST00000532708 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.24
TRAF3IP2-212ENST00000532708 NUTM2BA6NNL0 878 aaPredicted RBP16.52■□□□□ 0.24
TRAF3IP2-212ENST00000532708 NUTM2EB1AL46 878 aaPredicted RBP16.52■□□□□ 0.24
TRAF3IP2-212ENST00000532708 NUTM2AQ8IVF1 878 aaPredicted RBP16.52■□□□□ 0.24
TRAF3IP2-212ENST00000532708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRAF3IP2-212ENST00000532708 ABTB2Q8N961 1025 aa16.51■□□□□ 0.23
TRAF3IP2-212ENST00000532708 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
TRAF3IP2-212ENST00000532708 SHPRHQ149N8 1683 aa16.51■□□□□ 0.23
TRAF3IP2-212ENST00000532708 TTC21BQ7Z4L5 1316 aa16.51■□□□□ 0.23
TRAF3IP2-212ENST00000532708 ANKRD36BQ8N2N9 1353 aa16.5■□□□□ 0.23
TRAF3IP2-212ENST00000532708 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
TRAF3IP2-212ENST00000532708 SSH2Q76I76 1423 aa16.5■□□□□ 0.23
TRAF3IP2-212ENST00000532708 ALS2Q96Q42 1657 aa16.5■□□□□ 0.23
TRAF3IP2-212ENST00000532708 MON2Q7Z3U7 1717 aa16.5■□□□□ 0.23
TRAF3IP2-212ENST00000532708 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
TRAF3IP2-212ENST00000532708 CARD14Q9BXL6 1004 aa16.49■□□□□ 0.23
TRAF3IP2-212ENST00000532708 PANK3Q9H999 370 aa16.48■□□□□ 0.23
TRAF3IP2-212ENST00000532708 SPATA31A6Q5VVP1 1343 aa16.48■□□□□ 0.23
TRAF3IP2-212ENST00000532708 NLRP6P59044 892 aa16.47■□□□□ 0.23
TRAF3IP2-212ENST00000532708 NME9Q86XW9 330 aa16.47■□□□□ 0.23
TRAF3IP2-212ENST00000532708 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
TRAF3IP2-212ENST00000532708 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
TRAF3IP2-212ENST00000532708 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
TRAF3IP2-212ENST00000532708 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
TRAF3IP2-212ENST00000532708 COL22A1Q8NFW1 1626 aaPredicted RBP16.46■□□□□ 0.23
TRAF3IP2-212ENST00000532708 TTC21AQ8NDW8 1320 aa16.46■□□□□ 0.22
TRAF3IP2-212ENST00000532708 ADAMTS2O95450 1211 aa16.46■□□□□ 0.22
TRAF3IP2-212ENST00000532708 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.22
TRAF3IP2-212ENST00000532708 LRP6O75581 1613 aa16.45■□□□□ 0.22
TRAF3IP2-212ENST00000532708 PIK3C2AO00443 1686 aa16.45■□□□□ 0.22
TRAF3IP2-212ENST00000532708 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
TRAF3IP2-212ENST00000532708 NSD3Q9BZ95 1437 aa16.44■□□□□ 0.22
TRAF3IP2-212ENST00000532708 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
TRAF3IP2-212ENST00000532708 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
TRAF3IP2-212ENST00000532708 FYB1O15117 783 aa16.41■□□□□ 0.22
TRAF3IP2-212ENST00000532708 SOX12O15370 315 aa16.41■□□□□ 0.22
TRAF3IP2-212ENST00000532708 GGNBP2Q9H3C7 697 aa16.41■□□□□ 0.22
TRAF3IP2-212ENST00000532708 ABCA3Q99758 1704 aa16.4■□□□□ 0.22
TRAF3IP2-212ENST00000532708 GCP02774 474 aa16.4■□□□□ 0.22
TRAF3IP2-212ENST00000532708 C8orf37Q96NL8 207 aa16.4■□□□□ 0.22
TRAF3IP2-212ENST00000532708 CRYBG1Q9Y4K1 1723 aa16.4■□□□□ 0.22
TRAF3IP2-212ENST00000532708 USP19O94966 1318 aa16.39■□□□□ 0.21
TRAF3IP2-212ENST00000532708 ZC3H6P61129 1189 aaKnown RBP16.39■□□□□ 0.21
TRAF3IP2-212ENST00000532708 MARF1Q9Y4F3 1742 aaKnown RBP16.39■□□□□ 0.21
TRAF3IP2-212ENST00000532708 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
TRAF3IP2-212ENST00000532708 PHRF1Q9P1Y6 1649 aaKnown RBP16.38■□□□□ 0.21
TRAF3IP2-212ENST00000532708 COG3Q96JB2 828 aa16.38■□□□□ 0.21
TRAF3IP2-212ENST00000532708 KNSTRNQ9Y448 316 aa16.38■□□□□ 0.21
TRAF3IP2-212ENST00000532708 CGNL1Q0VF96 1302 aa16.38■□□□□ 0.21
TRAF3IP2-212ENST00000532708 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
TRAF3IP2-212ENST00000532708 ZNF316A6NFI3 1004 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP2-212ENST00000532708 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
TRAF3IP2-212ENST00000532708 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
TRAF3IP2-212ENST00000532708 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
TRAF3IP2-212ENST00000532708 FBLN1P23142 703 aa16.36■□□□□ 0.21
TRAF3IP2-212ENST00000532708 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
TRAF3IP2-212ENST00000532708 KIAA0232Q92628 1395 aa16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 OVOS2A0A0J9YW53 1432 aa16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 CHRNA2Q15822 529 aa16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 OVOS2Q6IE36 1432 aa16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 SLIT3O75094 1523 aa16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 PRDM11Q9NQV5 511 aa16.35■□□□□ 0.21
TRAF3IP2-212ENST00000532708 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
TRAF3IP2-212ENST00000532708 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
TRAF3IP2-212ENST00000532708 AFF2P51816 1311 aa16.33■□□□□ 0.2
TRAF3IP2-212ENST00000532708 USP54Q70EL1 1684 aa16.33■□□□□ 0.2
TRAF3IP2-212ENST00000532708 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
TRAF3IP2-212ENST00000532708 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
TRAF3IP2-212ENST00000532708 CC2D1BQ5T0F9 858 aaKnown RBP16.31■□□□□ 0.2
TRAF3IP2-212ENST00000532708 RGS17Q9UGC6 210 aaPredicted RBP16.31■□□□□ 0.2
TRAF3IP2-212ENST00000532708 ARHGEF25Q86VW2 580 aa16.31■□□□□ 0.2
TRAF3IP2-212ENST00000532708 NFAT5O94916 1531 aa16.31■□□□□ 0.2
TRAF3IP2-212ENST00000532708 FNBP4Q8N3X1 1017 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP2-212ENST00000532708 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
TRAF3IP2-212ENST00000532708 CPDO75976 1380 aa16.3■□□□□ 0.2
TRAF3IP2-212ENST00000532708 USP21Q9UK80 565 aa16.29■□□□□ 0.2
TRAF3IP2-212ENST00000532708 RRS1Q15050 365 aaKnown RBP16.29■□□□□ 0.2
TRAF3IP2-212ENST00000532708 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
TRAF3IP2-212ENST00000532708 COL14A1Q05707 1796 aaKnown RBP16.28■□□□□ 0.2
TRAF3IP2-212ENST00000532708 PLCH1Q4KWH8 1693 aa16.28■□□□□ 0.2
TRAF3IP2-212ENST00000532708 AXIN2Q9Y2T1 843 aa16.27■□□□□ 0.2
TRAF3IP2-212ENST00000532708 SLIT2O94813 1529 aa16.27■□□□□ 0.2
TRAF3IP2-212ENST00000532708 NSD2O96028 1365 aa16.27■□□□□ 0.2
TRAF3IP2-212ENST00000532708 BCL9LQ86UU0 1499 aa16.27■□□□□ 0.19
TRAF3IP2-212ENST00000532708 ANKRD26Q9UPS8 1709 aa16.27■□□□□ 0.19
TRAF3IP2-212ENST00000532708 MAP3K19Q56UN5 1328 aa16.26■□□□□ 0.19
TRAF3IP2-212ENST00000532708 LTN1O94822 1766 aa16.26■□□□□ 0.19
TRAF3IP2-212ENST00000532708 ZNF772Q68DY9 489 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP2-212ENST00000532708 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
TRAF3IP2-212ENST00000532708 STRN4Q9NRL3 753 aa16.26■□□□□ 0.19
TRAF3IP2-212ENST00000532708 AATKQ6ZMQ8 1374 aa16.25■□□□□ 0.19
TRAF3IP2-212ENST00000532708 CAMTA1Q9Y6Y1 1673 aa16.25■□□□□ 0.19
TRAF3IP2-212ENST00000532708 POTEAQ6S8J7 498 aa16.25■□□□□ 0.19
TRAF3IP2-212ENST00000532708 QTRT2Q9H974 415 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms