RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 H3BQV1 296 aa10.62□□□□□ -0.71
CTNND1-232ENST00000532649 CABP4P57796 275 aa10.62□□□□□ -0.71
CTNND1-232ENST00000532649 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
CTNND1-232ENST00000532649 KIF6Q6ZMV9 814 aa10.62□□□□□ -0.71
CTNND1-232ENST00000532649 NEUROD6Q96NK8 337 aa10.62□□□□□ -0.71
CTNND1-232ENST00000532649 PHF14O94880 888 aa10.61□□□□□ -0.71
CTNND1-232ENST00000532649 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
CTNND1-232ENST00000532649 THOC2Q8NI27 1593 aaKnown RBP10.61□□□□□ -0.71
CTNND1-232ENST00000532649 ZC3H6P61129 1189 aaKnown RBP10.61□□□□□ -0.71
CTNND1-232ENST00000532649 MAP3K1Q13233 1512 aa10.61□□□□□ -0.71
CTNND1-232ENST00000532649 FAM135AQ9P2D6 1515 aa10.61□□□□□ -0.71
CTNND1-232ENST00000532649 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
CTNND1-232ENST00000532649 TWISTNBQ3B726 338 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-232ENST00000532649 FAM184AQ8NB25 1140 aa10.61□□□□□ -0.71
CTNND1-232ENST00000532649 IDI1Q13907 227 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 DEKP35659 375 aaKnown RBP10.6□□□□□ -0.71
CTNND1-232ENST00000532649 RAPGEF6Q8TEU7 1601 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 DHX16O60231 1041 aaKnown RBP10.6□□□□□ -0.71
CTNND1-232ENST00000532649 REC8O95072 547 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
CTNND1-232ENST00000532649 LNPKQ9C0E8 428 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 R3HCC1Q9Y3T6 440 aaKnown RBP10.6□□□□□ -0.71
CTNND1-232ENST00000532649 ZKSCAN1P17029 563 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-232ENST00000532649 PDE4AP27815 886 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 NSD3Q9BZ95 1437 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 NCOA1Q15788 1441 aa10.6□□□□□ -0.71
CTNND1-232ENST00000532649 ANO2Q9NQ90 1003 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 ERC2O15083 957 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 WWC2Q6AWC2 1192 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
CTNND1-232ENST00000532649 ODF2Q5BJF6 829 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 AMOTL2Q9Y2J4 779 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 GPS2Q13227 327 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
CTNND1-232ENST00000532649 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
CTNND1-232ENST00000532649 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
CTNND1-232ENST00000532649 ADGRF5Q8IZF2 1346 aa10.58□□□□□ -0.72
CTNND1-232ENST00000532649 CCAR2Q8N163 923 aaKnown RBP10.58□□□□□ -0.72
CTNND1-232ENST00000532649 GNAI3P08754 354 aa10.57□□□□□ -0.72
CTNND1-232ENST00000532649 TRDNQ13061 729 aa10.57□□□□□ -0.72
CTNND1-232ENST00000532649 TRIM29Q14134 588 aa10.57□□□□□ -0.72
CTNND1-232ENST00000532649 PNISRQ8TF01 805 aaKnown RBP10.57□□□□□ -0.72
CTNND1-232ENST00000532649 DHX29Q7Z478 1369 aaKnown RBP10.57□□□□□ -0.72
CTNND1-232ENST00000532649 CT47A1Q5JQC4 288 aaPredicted RBP10.57□□□□□ -0.72
CTNND1-232ENST00000532649 CPLX2Q6PUV4 134 aaKnown RBP10.57□□□□□ -0.72
CTNND1-232ENST00000532649 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
CTNND1-232ENST00000532649 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
CTNND1-232ENST00000532649 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
CTNND1-232ENST00000532649 PPP6R1Q9UPN7 881 aa10.57□□□□□ -0.72
CTNND1-232ENST00000532649 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
CTNND1-232ENST00000532649 RNF20Q5VTR2 975 aa10.56□□□□□ -0.72
CTNND1-232ENST00000532649 ANKRD20A12PQ8NF67 263 aa10.56□□□□□ -0.72
CTNND1-232ENST00000532649 ATP10BO94823 1461 aa10.56□□□□□ -0.72
CTNND1-232ENST00000532649 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
CTNND1-232ENST00000532649 WASHC4Q2M389 1173 aa10.56□□□□□ -0.72
CTNND1-232ENST00000532649 GPATCH8Q9UKJ3 1502 aaKnown RBP10.56□□□□□ -0.72
CTNND1-232ENST00000532649 IPO7O95373 1038 aaKnown RBP10.56□□□□□ -0.72
CTNND1-232ENST00000532649 MCTP1Q6DN14 999 aa10.56□□□□□ -0.72
CTNND1-232ENST00000532649 SURF6O75683 361 aaKnown RBP10.55□□□□□ -0.72
CTNND1-232ENST00000532649 FOXD4L6Q3SYB3 417 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-232ENST00000532649 INTS3Q68E01 1043 aaKnown RBP10.55□□□□□ -0.72
CTNND1-232ENST00000532649 FOXD4L3Q6VB84 417 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-232ENST00000532649 NOS1P29475 1434 aa10.55□□□□□ -0.72
CTNND1-232ENST00000532649 TEX14Q8IWB6 1497 aa10.55□□□□□ -0.72
CTNND1-232ENST00000532649 FYB1O15117 783 aa10.55□□□□□ -0.72
CTNND1-232ENST00000532649 MYL6BP14649 208 aa10.55□□□□□ -0.72
CTNND1-232ENST00000532649 AAMPQ13685 434 aa10.55□□□□□ -0.72
CTNND1-232ENST00000532649 KIF21AQ7Z4S6 1674 aa10.55□□□□□ -0.72
CTNND1-232ENST00000532649 GOLGA6L19H0YKK7 550 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 CPLX1O14810 134 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 NOB1Q9ULX3 412 aaKnown RBP10.54□□□□□ -0.72
CTNND1-232ENST00000532649 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 FOXO3O43524 673 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 SAMD1Q6SPF0 538 aaPredicted RBP10.54□□□□□ -0.72
CTNND1-232ENST00000532649 NFXL1Q6ZNB6 911 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
CTNND1-232ENST00000532649 PLCH2O75038 1416 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 ERICH2A1L162 156 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 BTBD11A6QL63 1104 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 TMEM132AQ24JP5 1023 aa10.54□□□□□ -0.72
CTNND1-232ENST00000532649 SLC4A3P48751 1232 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 CDR1P51861 262 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 CCAR1Q8IX12 1150 aaKnown RBP10.53□□□□□ -0.72
CTNND1-232ENST00000532649 C1orf115Q9H7X2 142 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 PPP1R1BQ9UD71 204 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-232ENST00000532649 CTTNBP2Q8WZ74 1663 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 WASLO00401 505 aaPredicted RBP10.53□□□□□ -0.72
CTNND1-232ENST00000532649 GOLGA6L3A6NEY3 463 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 FCHSD2O94868 740 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 NME9Q86XW9 330 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 TNRQ92752 1358 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 ADAMTS12P58397 1594 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 WDR7Q9Y4E6 1490 aa10.53□□□□□ -0.72
CTNND1-232ENST00000532649 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
CTNND1-232ENST00000532649 HOOK1Q9UJC3 728 aaKnown RBP10.53□□□□□ -0.72
CTNND1-232ENST00000532649 ATP6V1DQ9Y5K8 247 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms