RNA–Protein interactions for RNA: ENST00000532541.5

LINC00958-206, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 1,124 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-206ENST00000532541 TRPM3Q9HCF6 1732 aaPredicted RBP11.62□□□□□ -0.55
LINC00958-206ENST00000532541 CHRNA2Q15822 529 aa11.61□□□□□ -0.55
LINC00958-206ENST00000532541 STRN4Q9NRL3 753 aa11.61□□□□□ -0.55
LINC00958-206ENST00000532541 ARHGEF28Q8N1W1 1705 aaKnown RBP11.6□□□□□ -0.55
LINC00958-206ENST00000532541 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
LINC00958-206ENST00000532541 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
LINC00958-206ENST00000532541 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
LINC00958-206ENST00000532541 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
LINC00958-206ENST00000532541 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
LINC00958-206ENST00000532541 ALS2Q96Q42 1657 aa11.59□□□□□ -0.55
LINC00958-206ENST00000532541 PSDA5PKW4 1024 aaPredicted RBP11.59□□□□□ -0.55
LINC00958-206ENST00000532541 ZC3H6P61129 1189 aaKnown RBP11.59□□□□□ -0.55
LINC00958-206ENST00000532541 CDK19Q9BWU1 502 aa11.59□□□□□ -0.55
LINC00958-206ENST00000532541 ITSN1Q15811 1721 aa11.59□□□□□ -0.55
LINC00958-206ENST00000532541 EP400Q96L91 3159 aa11.59□□□□□ -0.55
LINC00958-206ENST00000532541 BAG6P46379 1132 aa11.58□□□□□ -0.56
LINC00958-206ENST00000532541 ATP7BP35670 1465 aa11.57□□□□□ -0.56
LINC00958-206ENST00000532541 KIAA0232Q92628 1395 aa11.57□□□□□ -0.56
LINC00958-206ENST00000532541 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
LINC00958-206ENST00000532541 EVA1CP58658 441 aa11.56□□□□□ -0.56
LINC00958-206ENST00000532541 ACEP12821 1306 aa11.56□□□□□ -0.56
LINC00958-206ENST00000532541 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
LINC00958-206ENST00000532541 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
LINC00958-206ENST00000532541 ONECUT3O60422 494 aaPredicted RBP11.55□□□□□ -0.56
LINC00958-206ENST00000532541 EN1Q05925 392 aaPredicted RBP11.55□□□□□ -0.56
LINC00958-206ENST00000532541 NBPF1Q3BBV0 1214 aa11.55□□□□□ -0.56
LINC00958-206ENST00000532541 ABTB2Q8N961 1025 aa11.55□□□□□ -0.56
LINC00958-206ENST00000532541 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
LINC00958-206ENST00000532541 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
LINC00958-206ENST00000532541 PHRF1Q9P1Y6 1649 aaKnown RBP11.54□□□□□ -0.56
LINC00958-206ENST00000532541 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
LINC00958-206ENST00000532541 NBPF8Q3BBV2 869 aa11.53□□□□□ -0.56
LINC00958-206ENST00000532541 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
LINC00958-206ENST00000532541 TRIM37O94972 964 aa11.52□□□□□ -0.57
LINC00958-206ENST00000532541 HRCP23327 699 aa11.52□□□□□ -0.57
LINC00958-206ENST00000532541 SPATA31A1Q5TZJ5 1347 aa11.52□□□□□ -0.57
LINC00958-206ENST00000532541 RGPD1P0DJD0 1748 aa11.52□□□□□ -0.57
LINC00958-206ENST00000532541 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
LINC00958-206ENST00000532541 PDE3BQ13370 1112 aa11.51□□□□□ -0.57
LINC00958-206ENST00000532541 NEUROD1Q13562 356 aa11.51□□□□□ -0.57
LINC00958-206ENST00000532541 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
LINC00958-206ENST00000532541 TOPAZ1Q8N9V7 1692 aa11.51□□□□□ -0.57
LINC00958-206ENST00000532541 CENPJQ9HC77 1338 aaPredicted RBP11.51□□□□□ -0.57
LINC00958-206ENST00000532541 THSD7AQ9UPZ6 1657 aa11.5□□□□□ -0.57
LINC00958-206ENST00000532541 KIAA1210Q9ULL0 1709 aa11.5□□□□□ -0.57
LINC00958-206ENST00000532541 EZH2Q15910 746 aaKnown RBP11.5□□□□□ -0.57
LINC00958-206ENST00000532541 LARP1Q6PKG0 1096 aaKnown RBP11.5□□□□□ -0.57
LINC00958-206ENST00000532541 NRKQ7Z2Y5 1582 aa11.5□□□□□ -0.57
LINC00958-206ENST00000532541 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
LINC00958-206ENST00000532541 SOX12O15370 315 aa11.49□□□□□ -0.57
LINC00958-206ENST00000532541 APBA3O96018 575 aa11.49□□□□□ -0.57
LINC00958-206ENST00000532541 POLR3AO14802 1390 aaPredicted RBP11.49□□□□□ -0.57
LINC00958-206ENST00000532541 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
LINC00958-206ENST00000532541 NLRP13Q86W25 1043 aa11.48□□□□□ -0.57
LINC00958-206ENST00000532541 SIN3AQ96ST3 1273 aa11.48□□□□□ -0.57
LINC00958-206ENST00000532541 CABP1Q9NZU7 370 aa11.48□□□□□ -0.57
LINC00958-206ENST00000532541 TNS1Q9HBL0 1735 aaKnown RBP11.47□□□□□ -0.57
LINC00958-206ENST00000532541 PLEKHG3A1L390 1219 aa11.47□□□□□ -0.57
LINC00958-206ENST00000532541 NLRP6P59044 892 aa11.47□□□□□ -0.57
LINC00958-206ENST00000532541 FAM196AQ6ZSG2 479 aa11.47□□□□□ -0.57
LINC00958-206ENST00000532541 TCP11L2Q8N4U5 519 aa11.47□□□□□ -0.57
LINC00958-206ENST00000532541 SRCAPQ6ZRS2 3230 aa11.47□□□□□ -0.57
LINC00958-206ENST00000532541 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.57
LINC00958-206ENST00000532541 GCP02774 474 aa11.46□□□□□ -0.57
LINC00958-206ENST00000532541 L3MBTL2Q969R5 705 aa11.46□□□□□ -0.57
LINC00958-206ENST00000532541 ROCK2O75116 1388 aaKnown RBP11.44□□□□□ -0.58
LINC00958-206ENST00000532541 USP19O94966 1318 aa11.44□□□□□ -0.58
LINC00958-206ENST00000532541 TOM1L2Q6ZVM7 507 aa11.44□□□□□ -0.58
LINC00958-206ENST00000532541 LRP5O75197 1615 aa11.44□□□□□ -0.58
LINC00958-206ENST00000532541 USP6P35125 1406 aa11.43□□□□□ -0.58
LINC00958-206ENST00000532541 EVC2Q86UK5 1308 aa11.43□□□□□ -0.58
LINC00958-206ENST00000532541 CSB-PGBD3P0DP91 1061 aa11.43□□□□□ -0.58
LINC00958-206ENST00000532541 BARGINQ6ZT62 677 aa11.43□□□□□ -0.58
LINC00958-206ENST00000532541 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
LINC00958-206ENST00000532541 LMO7Q8WWI1 1683 aa11.43□□□□□ -0.58
LINC00958-206ENST00000532541 CPDO75976 1380 aa11.42□□□□□ -0.58
LINC00958-206ENST00000532541 CAMKK2Q96RR4 588 aa11.42□□□□□ -0.58
LINC00958-206ENST00000532541 TRPM1Q7Z4N2 1603 aa11.41□□□□□ -0.58
LINC00958-206ENST00000532541 CRB1P82279 1406 aa11.41□□□□□ -0.58
LINC00958-206ENST00000532541 DDB1Q16531 1140 aa11.4□□□□□ -0.58
LINC00958-206ENST00000532541 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
LINC00958-206ENST00000532541 THRAP3Q9Y2W1 955 aaKnown RBP11.4□□□□□ -0.58
LINC00958-206ENST00000532541 DISP2A7MBM2 1401 aa11.4□□□□□ -0.58
LINC00958-206ENST00000532541 PIK3C2AO00443 1686 aa11.4□□□□□ -0.59
LINC00958-206ENST00000532541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.39□□□□□ -0.59
LINC00958-206ENST00000532541 TTC21BQ7Z4L5 1316 aa11.38□□□□□ -0.59
LINC00958-206ENST00000532541 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
LINC00958-206ENST00000532541 PPP1R1BQ9UD71 204 aaPredicted RBP11.38□□□□□ -0.59
LINC00958-206ENST00000532541 SLIT3O75094 1523 aa11.38□□□□□ -0.59
LINC00958-206ENST00000532541 AATKQ6ZMQ8 1374 aa11.38□□□□□ -0.59
LINC00958-206ENST00000532541 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
LINC00958-206ENST00000532541 PARP4Q9UKK3 1724 aaKnown RBP11.38□□□□□ -0.59
LINC00958-206ENST00000532541 OVOS2A0A0G2JMS6 1433 aa11.37□□□□□ -0.59
LINC00958-206ENST00000532541 OVOS2A0A0J9YW53 1432 aa11.37□□□□□ -0.59
LINC00958-206ENST00000532541 OVOS2Q6IE36 1432 aa11.37□□□□□ -0.59
LINC00958-206ENST00000532541 RGPD5Q99666 1765 aa11.37□□□□□ -0.59
LINC00958-206ENST00000532541 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
LINC00958-206ENST00000532541 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
LINC00958-206ENST00000532541 BRD4O60885 1362 aaPredicted RBP11.37□□□□□ -0.59
LINC00958-206ENST00000532541 KTN1Q86UP2 1357 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms