RNA–Protein interactions for RNA: ENST00000532367.1

SMPD1-207, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-207ENST00000532367 USP6P35125 1406 aa15.38■□□□□ 0.05
SMPD1-207ENST00000532367 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
SMPD1-207ENST00000532367 ESCO1Q5FWF5 840 aa15.38■□□□□ 0.05
SMPD1-207ENST00000532367 TTC21BQ7Z4L5 1316 aa15.38■□□□□ 0.05
SMPD1-207ENST00000532367 GGNBP2Q9H3C7 697 aa15.37■□□□□ 0.05
SMPD1-207ENST00000532367 C1orf167Q5SNV9 1468 aa15.36■□□□□ 0.05
SMPD1-207ENST00000532367 TTC21AQ8NDW8 1320 aa15.36■□□□□ 0.05
SMPD1-207ENST00000532367 MST1RQ04912 1400 aa15.35■□□□□ 0.05
SMPD1-207ENST00000532367 SSH2Q76I76 1423 aa15.35■□□□□ 0.05
SMPD1-207ENST00000532367 NRKQ7Z2Y5 1582 aa15.35■□□□□ 0.05
SMPD1-207ENST00000532367 NME9Q86XW9 330 aa15.34■□□□□ 0.05
SMPD1-207ENST00000532367 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
SMPD1-207ENST00000532367 KIF1AQ12756 1690 aa15.34■□□□□ 0.05
SMPD1-207ENST00000532367 PSME1Q06323 249 aa15.33■□□□□ 0.04
SMPD1-207ENST00000532367 COG3Q96JB2 828 aa15.33■□□□□ 0.04
SMPD1-207ENST00000532367 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
SMPD1-207ENST00000532367 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
SMPD1-207ENST00000532367 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
SMPD1-207ENST00000532367 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
SMPD1-207ENST00000532367 YTHDC1Q96MU7 727 aaKnown RBP15.31■□□□□ 0.04
SMPD1-207ENST00000532367 LTBP4Q8N2S1 1624 aa15.31■□□□□ 0.04
SMPD1-207ENST00000532367 POTEDQ86YR6 584 aa15.3■□□□□ 0.04
SMPD1-207ENST00000532367 FOXO3O43524 673 aa15.29■□□□□ 0.04
SMPD1-207ENST00000532367 SLAIN2Q9P270 581 aa15.29■□□□□ 0.04
SMPD1-207ENST00000532367 ZRANB1Q9UGI0 708 aa15.29■□□□□ 0.04
SMPD1-207ENST00000532367 USP31Q70CQ4 1352 aa15.28■□□□□ 0.04
SMPD1-207ENST00000532367 PAK3O75914 559 aaPredicted RBP15.28■□□□□ 0.04
SMPD1-207ENST00000532367 MTHFSP49914 203 aa15.28■□□□□ 0.04
SMPD1-207ENST00000532367 KRT28Q7Z3Y7 464 aa15.28■□□□□ 0.04
SMPD1-207ENST00000532367 CFAP53Q96M91 514 aa15.28■□□□□ 0.04
SMPD1-207ENST00000532367 OVOS2A0A0J9YW53 1432 aa15.27■□□□□ 0.04
SMPD1-207ENST00000532367 OVOS2Q6IE36 1432 aa15.27■□□□□ 0.04
SMPD1-207ENST00000532367 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
SMPD1-207ENST00000532367 NPHP3Q7Z494 1330 aa15.26■□□□□ 0.03
SMPD1-207ENST00000532367 ABTB2Q8N961 1025 aa15.26■□□□□ 0.03
SMPD1-207ENST00000532367 PIK3C2AO00443 1686 aa15.25■□□□□ 0.03
SMPD1-207ENST00000532367 MAP2P11137 1827 aaKnown RBP15.25■□□□□ 0.03
SMPD1-207ENST00000532367 NLRP6P59044 892 aa15.25■□□□□ 0.03
SMPD1-207ENST00000532367 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
SMPD1-207ENST00000532367 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMPD1-207ENST00000532367 BRINP3Q76B58 766 aa15.24■□□□□ 0.03
SMPD1-207ENST00000532367 POLKQ9UBT6 870 aa15.23■□□□□ 0.03
SMPD1-207ENST00000532367 TRPM3Q9HCF6 1732 aaPredicted RBP15.23■□□□□ 0.03
SMPD1-207ENST00000532367 XPCQ01831 940 aaPredicted RBP15.22■□□□□ 0.03
SMPD1-207ENST00000532367 SBNO1A3KN83 1393 aa15.22■□□□□ 0.03
SMPD1-207ENST00000532367 INSRP06213 1382 aa15.22■□□□□ 0.03
SMPD1-207ENST00000532367 FBLN1P23142 703 aa15.21■□□□□ 0.03
SMPD1-207ENST00000532367 NUTM2GQ5VZR2 741 aa15.21■□□□□ 0.03
SMPD1-207ENST00000532367 SMG6Q86US8 1419 aaKnown RBP15.2■□□□□ 0.02
SMPD1-207ENST00000532367 HNRNPUQ00839 825 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMPD1-207ENST00000532367 NUDCQ9Y266 331 aa15.2■□□□□ 0.02
SMPD1-207ENST00000532367 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
SMPD1-207ENST00000532367 MARF1Q9Y4F3 1742 aaKnown RBP15.2■□□□□ 0.02
SMPD1-207ENST00000532367 PPM1GO15355 546 aaPredicted RBP15.19■□□□□ 0.02
SMPD1-207ENST00000532367 CENPBP07199 599 aaPredicted RBP15.19■□□□□ 0.02
SMPD1-207ENST00000532367 RRS1Q15050 365 aaKnown RBP15.19■□□□□ 0.02
SMPD1-207ENST00000532367 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
SMPD1-207ENST00000532367 DDX17Q92841 729 aaKnown RBP15.19■□□□□ 0.02
SMPD1-207ENST00000532367 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
SMPD1-207ENST00000532367 EMILIN1Q9Y6C2 1016 aa15.19■□□□□ 0.02
SMPD1-207ENST00000532367 DIAPH1O60610 1272 aaKnown RBP15.18■□□□□ 0.02
SMPD1-207ENST00000532367 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
SMPD1-207ENST00000532367 PXDNQ92626 1479 aa15.18■□□□□ 0.02
SMPD1-207ENST00000532367 ALS2Q96Q42 1657 aa15.18■□□□□ 0.02
SMPD1-207ENST00000532367 SHPRHQ149N8 1683 aa15.17■□□□□ 0.02
SMPD1-207ENST00000532367 COL3A1P02461 1466 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-207ENST00000532367 CDK12Q9NYV4 1490 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-207ENST00000532367 SOX12O15370 315 aa15.17■□□□□ 0.02
SMPD1-207ENST00000532367 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-207ENST00000532367 SPATA31A3Q5VYP0 1347 aa15.17■□□□□ 0.02
SMPD1-207ENST00000532367 NHSL1Q5SYE7 1610 aa15.16■□□□□ 0.02
SMPD1-207ENST00000532367 TNS3Q68CZ2 1445 aa15.16■□□□□ 0.02
SMPD1-207ENST00000532367 ARHGEF10O15013 1369 aa15.15■□□□□ 0.02
SMPD1-207ENST00000532367 KIF24Q5T7B8 1368 aa15.15■□□□□ 0.02
SMPD1-207ENST00000532367 TOM1O60784 492 aa15.15■□□□□ 0.02
SMPD1-207ENST00000532367 BLMP54132 1417 aaPredicted RBP15.15■□□□□ 0.02
SMPD1-207ENST00000532367 USP19O94966 1318 aa15.15■□□□□ 0.02
SMPD1-207ENST00000532367 MAP3K19Q56UN5 1328 aa15.15■□□□□ 0.02
SMPD1-207ENST00000532367 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
SMPD1-207ENST00000532367 SLIT3O75094 1523 aa15.14■□□□□ 0.01
SMPD1-207ENST00000532367 AMPHP49418 695 aa15.14■□□□□ 0.01
SMPD1-207ENST00000532367 U2SURPO15042 1029 aaKnown RBP15.13■□□□□ 0.01
SMPD1-207ENST00000532367 GCP02774 474 aa15.13■□□□□ 0.01
SMPD1-207ENST00000532367 U2AF1L5P0DN76 240 aaPredicted RBP15.13■□□□□ 0.01
SMPD1-207ENST00000532367 U2AF1Q01081 240 aaKnown RBP eCLIP15.13■□□□□ 0.01
SMPD1-207ENST00000532367 ROBO1Q9Y6N7 1651 aa15.12■□□□□ 0.01
SMPD1-207ENST00000532367 FLT4P35916 1363 aa15.12■□□□□ 0.01
SMPD1-207ENST00000532367 IL13P35225 146 aa15.12■□□□□ 0.01
SMPD1-207ENST00000532367 ZBED9Q6R2W3 1325 aa15.12■□□□□ 0.01
SMPD1-207ENST00000532367 NFAT5O94916 1531 aa15.12■□□□□ 0.01
SMPD1-207ENST00000532367 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
SMPD1-207ENST00000532367 PNNQ9H307 717 aaKnown RBP15.11■□□□□ 0.01
SMPD1-207ENST00000532367 LTN1O94822 1766 aa15.11■□□□□ 0.01
SMPD1-207ENST00000532367 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
SMPD1-207ENST00000532367 HSP90AB2PQ58FF8 381 aa15.1■□□□□ 0.01
SMPD1-207ENST00000532367 RUNDC1Q96C34 613 aa15.1■□□□□ 0.01
SMPD1-207ENST00000532367 AHDC1Q5TGY3 1603 aaPredicted RBP15.1■□□□□ 0.01
SMPD1-207ENST00000532367 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
SMPD1-207ENST00000532367 HOXC9P31274 260 aa15.09■□□□□ 0.01
SMPD1-207ENST00000532367 EIF4A2Q14240 407 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms